nag genes of Ralstonia (formerly pseudomonas) sp. Strain U2 encoding enzymes for gentisate catabolism

Journal of Bacteriology

Volumn 183, Issue 2, 2001, Pages 700-708

  Zhou, N Y ^a   Fuenmayor, S L ^a   Williams, P A ^a  

^a BANGOR UNIVERSITY   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

AMPICILLIN; GENE PRODUCT; GENTISIC ACID; NAPHTHALENE DERIVATIVE; PLASMID DNA; RIBOSOME DNA; RNA 16S;

ARTICLE; BACTERIAL METABOLISM; CATABOLISM; ENZYME ACTIVITY; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; PSEUDOMONAS; RALSTONIA; STRAIN DIFFERENCE;

BACTERIAL PROTEINS; CIS-TRANS-ISOMERASES; CLONING, MOLECULAR; DICARBOXYLIC ACIDS; DIOXYGENASES; GENES, BACTERIAL; GENTISATES; HYDROLASES; HYDROXYBENZOIC ACIDS; MODELS, BIOLOGICAL; MOLECULAR SEQUENCE DATA; NAPHTHALENES; OXYGENASES; PIMELIC ACIDS; PSEUDOMONAS; SEQUENCE ANALYSIS, DNA;

EID: 0035167509     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.183.2.700-708.2001     Document Type: Article

References (57)

1. Basic local alignment search tool
2. Genetic organization and characteristics of the 3-(3-hydroxyphenyl)propionic acid degradation pathway of Comamonas testosteroni TA441
3. Molecular characterization of Fdx1, a putidaredoxin-type [2Fe-2S] ferredoxin able to transfer electrons to the dioxin dioxygenase of Sphingomonas sp. RW1
4. The Pfam protein families database
5. Purification and some properties of maleylpyruvate hydrolase and fumarylpyruvate hydrolase from Pseudomonas alcaligenes
6. A restriction map of naphthalene catabolic plasmid pWW60-1 and the location of some of its catabolic genes
7. Purification and properties of gentisate 1,2-dioxygenase from Moraxella osloensis
8. Rapid spectrophotometric differentiation between glutathione-dependent and glutathione-independent gentisate and homogentisate pathways
9. Organization and evolution of naphthalene catabolic pathways: Sequence of the DNA encoding 2-hydroxychromene-2-carboxylate isomerase and trans-o-hydroxybenzylidenepyruvate hydratase-aldolase from the NAH7 plasmid
10. Purification and characterization of gentisate 1,2-dioxygenases from Pseudomonas alcaligenes NCIB 9867 and Pseudomonas putida NCIB 9869
11. Molecular characterization of a gene encoding a homogentisate dioxygenase from Aspergillus nidulans and identification of its human and plant homologs
12. Characterization of a fungal maleylacetoacetate isomerase gene and identification of its human homologue
13. Gentisate 1,2-dioxygenase from Haloferax sp. D1227
14. A gene cluster encoding steps in conversion of naphthalene to gentisate in Pseudomonas sp. strain U2
15. Gentisate pathway in Salmonella typhimurium: Metabolism of m-hydroxybenzoate and gentisate
16. NahY, a catabolic plasmid-encoded receptor required for chemotaxis of Pseudomonas putida to the aromatic hydrocarbon naphthalene
17. Naphthalene degradation via salicylate and gentisate by Rhodococcus sp strain B4
18. Glutathione-independent isomerization of maleylpyruvate by Bacillus megaterium and other gram-positive bacteria
19. 2+ and mechanism of turnover
20. Gentisate 1,2-dioxygenase from Pseudomonas-purification, characterization, and comparison of the enzymes from Pseudomonas testosteroni and Pseudomonas acidovorans
21. The biphenyl polychlorinated biphenyl-degradation locus (bph) of Pseudomonas sp LB400 encodes 4 additional metabolic enzymes
22. Enzymic formation of D-malate
23. The molecular cloning of genes specifying some enzymes of the 3,5-xylenol degradative pathway
24. Catabolism of 3-hydroxybenzoate by the gentisate pathway in Klebsiella pneumoniae M5a1
25. Functional analyses of a variety of chimeric dioxygenases constructed from two biphenyl dioxygenases that are similar structurally but different functionally
26. The enzymic oxidation of gentisic acid
27. Enzymic cis-trans isomerisation of maleylpyruvic acid
28. 16S/23S rRNA sequencing
29. Ketonization of 2-hydroxy-2,4-pentadienoate by 4-oxalocrotonate tautomerase - Implications for the stereochemical course and the mechanism
30. Glutathione S-transferase-encoding gene as a potential probe for environmental bacterial isolates capable of degrading polycyclic aromatic hydrocarbons
31. Identification of a novel nutrient-deprivation-induced Sinorhizobium meliloti gene (hmgA) involved in the degradation of tyrosine
32. CDC group IV c-2: A new Ralstonia species close to Ralstonia eutropha
33. Plasmidborne Tn5 insertion mutation resulting in accumulation of gentisate from salicylate
34. Nucleotide sequence corresponding to five chemotaxis genes in Escherichia coli
35. Chlorobenzoate catabolic transposon Tn5271 is a composite class-I element with flanking class-II insertion sequences
36. Salicylic acid metabolism through a gentisate pathway by Pseudomonas sp TA-2
37. Phenotypic and genotypic characterization of clinical strains of CDC group IVc-2
38. Evidence for isofunctional enzymes used in m-cresol and 2,5-xylenol degradation via gentisate pathway in Pseudomonas alcaligenes
39. Plasmid-mediated degradation of o-phthalate and salicylate by a Moraxella sp
40. In vitro formation of a catabolic plasmid carrying Klebsiella pneumoniae DNA that allows growth of Escherichia coli K-12 on 3-hydroxybenzoate
41. Homology between nucleotide sequences of promoter regions of nah and sal operons of NAH7 plasmid of Pseudomonas putida
42. Evidence that the transcription activator encoded by the Pseudomonas putida nahR gene is evolutionarily related to the transcription activators encoded by the Rhizobium nodD genes
43. Sequences of genes encoding naphthalene dioxygenase in Pseudomonas putida strains G7 and NCIB 9816-4
44. Detection of specific sequences among DNA fragments separated by gel electrophoresis
45. Mutations in the fumarylacetoacetate hydrolase gene causing hereditary tyrosinemia type I: Overview
46. Use of bacteriophage T7 RNA polymerase to direct selective high level expression of cloned genes
47. Isolation of fumarylpyruvic acid as an intermediate of the gentisic acid oxidation by Pseudomonas ovalis var. S-5
48. Assignment of centers for disease control group IVc-2 to the genus Ralstonia as Ralstonia paucula sp. nov.
49. Bacterial glutathione S-transferases: What are they good for?
50. A marine oligobacterium harboring genes known to be part of aromatic hydrocarbon degradation pathways of soil pseudomonads
51. Biochemical and genetic characterization of a gentisate 1,2-dioxygenase from Sphingomonas sp. strain RW5
52. Rapid methods for the study of both stable and unstable plasmids in Pseudomonas
53. Metabolism of toluene and xylenes by Pseudomonas putida (arvilla) mt-2: Evidence for a new function of the TOL plasmid
54. Improved M13 phage cloning vectors and host strains: Nucleotide sequences of the M13mp18 and pUC19 vectors