-
2
-
-
0032489015
-
Three-dimensional fold of the human AQP1water channel determined at 4 Å resolution by electron crystallography of two-dimensional crystals embedded in ice
-
Alberts B. Three-dimensional fold of the human AQP1water channel determined at 4. Å resolution by electron crystallography of two-dimensional crystals embedded in ice Cell. 92:1998;291-294.
-
(1998)
Cell
, vol.92
, pp. 291-294
-
-
Alberts, B.1
-
3
-
-
0004290179
-
A 9 Å resolution X-ray crystallographic map of the large ribosomal subunit
-
Ban N., Freeborn B., Nissen P., Penczek P., Grassucci R.A., Sweet R., Frank J., Moore P.B., Steitz T.A. A 9. Å resolution X-ray crystallographic map of the large ribosomal subunit Cell. 93:1998;1105-1115.
-
(1998)
Cell
, vol.93
, pp. 1105-1115
-
-
Ban, N.1
Freeborn, B.2
Nissen, P.3
Penczek, P.4
Grassucci, R.A.5
Sweet, R.6
Frank, J.7
Moore, P.B.8
Steitz, T.A.9
-
4
-
-
0033954256
-
The Protein Data Bank
-
Berman H.M., Westbrook J., Feng Z., Gilliland G., Bhat T.N., Weissig H., Shindyalov I.N., Bourne P.E. The Protein Data Bank. Nucleic Acids Res. 28:2000;235-242.
-
(2000)
Nucleic Acids Res.
, vol.28
, pp. 235-242
-
-
Berman, H.M.1
Westbrook, J.2
Feng, Z.3
Gilliland, G.4
Bhat, T.N.5
Weissig, H.6
Shindyalov, I.N.7
Bourne, P.E.8
-
5
-
-
0032807499
-
The BioImage Database Project: Organizing multidimensional biological images in an object-relational database
-
Carazo J.M., Stelzer E.H. The BioImage Database Project: organizing multidimensional biological images in an object-relational database. J. Struct. Biol. 125:1999;97-102.
-
(1999)
J. Struct. Biol.
, vol.125
, pp. 97-102
-
-
Carazo, J.M.1
Stelzer, E.H.2
-
6
-
-
0037436340
-
Mega-Dalton biomolecular motion captured from electron microscopy reconstructions
-
Chacón P., Tama F., Wriggers W. Mega-Dalton biomolecular motion captured from electron microscopy reconstructions. J. Mol. Biol. 326:2003;485-492.
-
(2003)
J. Mol. Biol.
, vol.326
, pp. 485-492
-
-
Chacón, P.1
Tama, F.2
Wriggers, W.3
-
8
-
-
0027214794
-
Teaching electron diffraction and imaging of macromolecules
-
Chiu W., Schmid M.F., Prasad B.V.V. Teaching electron diffraction and imaging of macromolecules. Biophys. J. 64:1993;1610-1625.
-
(1993)
Biophys. J.
, vol.64
, pp. 1610-1625
-
-
Chiu, W.1
Schmid, M.F.2
Prasad, B.V.V.3
-
9
-
-
0035996965
-
Modeling shape and topology of low-resolution density maps of biological macromolecules
-
De-Alarcón P.A., Pascual-Montano A., Gupta A., Carazo J.M. Modeling shape and topology of low-resolution density maps of biological macromolecules. Biophys. J. 83:2002;619-632.
-
(2002)
Biophys. J.
, vol.83
, pp. 619-632
-
-
De-Alarcón, P.A.1
Pascual-Montano, A.2
Gupta, A.3
Carazo, J.M.4
-
10
-
-
84937564210
-
Spin images and neural networks for efficient content-based retrieval in 3D object databases
-
De-Alarcón P.A., Pascual-Montano A., Carazo J.M. Spin images and neural networks for efficient content-based retrieval in 3D object databases. Lecture Notes on Computer Science. 238:2002;225-234.
-
(2002)
Lecture Notes on Computer Science
, vol.238
, pp. 225-234
-
-
De-Alarcón, P.A.1
Pascual-Montano, A.2
Carazo, J.M.3
-
11
-
-
34250098710
-
Using Canny's criteria to derive a recursively implemented optimal edge detector
-
Deriche R. Using Canny's criteria to derive a recursively implemented optimal edge detector. Image Vision Comput. 1:1987;167-187.
-
(1987)
Image Vision Comput.
, vol.1
, pp. 167-187
-
-
Deriche, R.1
-
13
-
-
0024007766
-
Cryoelectron microscopy of vitrified specimens
-
Dubochet J., Adrian M., Chang J.J., Homo J.C., Lepault J., McDowell A.W., Schultz P. Cryoelectron microscopy of vitrified specimens. Q. Rev. Biophys. 21:1988;129-228.
-
(1988)
Q. Rev. Biophys.
, vol.21
, pp. 129-228
-
-
Dubochet, J.1
Adrian, M.2
Chang, J.J.3
Homo, J.C.4
Lepault, J.5
McDowell, A.W.6
Schultz, P.7
-
14
-
-
51249162203
-
The union of balls and its dual shape
-
Edelsbrunner H. The union of balls and its dual shape. Discr. Comput. Geom. 13:1995;415-440.
-
(1995)
Discr. Comput. Geom.
, vol.13
, pp. 415-440
-
-
Edelsbrunner, H.1
-
16
-
-
85053919378
-
Measuring pockets and voids in proteins
-
Edelsbrunner, H., Facello, M.A., Fu, P., Liang, J., 1995. Measuring pockets and voids in proteins. In: Proceedings of the 28th Annual Hawaii International Conference on System Sciences.
-
(1995)
Proceedings of the 28th Annual Hawaii International Conference on System Sciences
-
-
Edelsbrunner, H.1
Facello, M.A.2
Fu, P.3
Liang, J.4
-
17
-
-
0030310298
-
On the definition and the construction of pockets in macromolecules
-
Edelsbrunner H., Facello M.A., Liagn J. On the definition and the construction of pockets in macromolecules. Pac. Symp. Biocomput. 1996;272-287.
-
(1996)
Pac. Symp. Biocomput.
, pp. 272-287
-
-
Edelsbrunner, H.1
Facello, M.A.2
Liagn, J.3
-
18
-
-
0032538274
-
The first step: Activation of the Semliki Forest virus spike protein precursor causes a localized conformational change in the trimeric spike
-
Ferlenghi I., Gowen B., de Haas F., Mancini E.J., Garoff H., Sjoberg M., Fuller S.D. The first step: activation of the Semliki Forest virus spike protein precursor causes a localized conformational change in the trimeric spike. J. Mol. Biol. 283:1998;71-81.
-
(1998)
J. Mol. Biol.
, vol.283
, pp. 71-81
-
-
Ferlenghi, I.1
Gowen, B.2
De Haas, F.3
Mancini, E.J.4
Garoff, H.5
Sjoberg, M.6
Fuller, S.D.7
-
19
-
-
0036667729
-
Structure and function of water channels
-
Fujiyoshi Y., Mitsuoka K., de Groot B.L., Philippsen A., Grubmuller H., Agre P., Engel A. Structure and function of water channels. Curr. Opin. Struct. Biol. 2:2002;509-515.
-
(2002)
Curr. Opin. Struct. Biol.
, vol.2
, pp. 509-515
-
-
Fujiyoshi, Y.1
Mitsuoka, K.2
De Groot, B.L.3
Philippsen, A.4
Grubmuller, H.5
Agre, P.6
Engel, A.7
-
20
-
-
0003739233
-
-
Academic Press, London
-
Hawkes, P.W., Kasper, E., 1996. Principles of Electron Optics, vol. 3. Academic Press, London.
-
(1996)
Principles of Electron Optics
, vol.3
-
-
Hawkes, P.W.1
Kasper, E.2
-
21
-
-
0016842810
-
Three-dimensional model of purple membrane obtained by electron microscopy
-
Henderson R., Unwin P.N.T. Three-dimensional model of purple membrane obtained by electron microscopy. Nature. 257:1975;28-32.
-
(1975)
Nature
, vol.257
, pp. 28-32
-
-
Henderson, R.1
Unwin, P.N.T.2
-
22
-
-
0032169688
-
PQS: A protein quaternary structure file server
-
Henrick K., Thornton J.M. PQS: a protein quaternary structure file server. Trends Biochem. Sci. 23:1998;358-361.
-
(1998)
Trends Biochem. Sci.
, vol.23
, pp. 358-361
-
-
Henrick, K.1
Thornton, J.M.2
-
23
-
-
0035906702
-
Bringing the information gap: Computational tools for intermediate resolution structure interpretation
-
Jiang W., Baker M.L., Ludtke S.J., Chiu W. Bringing the information gap: computational tools for intermediate resolution structure interpretation. J. Mol. Biol. 308:2001;1033-1044.
-
(2001)
J. Mol. Biol.
, vol.308
, pp. 1033-1044
-
-
Jiang, W.1
Baker, M.L.2
Ludtke, S.J.3
Chiu, W.4
-
24
-
-
0032685832
-
Using spin-images for efficient multiple model recognition in cluttered 3-d scenes
-
Johnson A.E., Hebert M. Using spin-images for efficient multiple model recognition in cluttered 3-d scenes. IEEE Trans. Pattern Anal. Mach. Intell. 21:1999;433-449.
-
(1999)
IEEE Trans. Pattern Anal. Mach. Intell.
, vol.21
, pp. 433-449
-
-
Johnson, A.E.1
Hebert, M.2
-
25
-
-
0034695259
-
15 Å resolution model of the monomeric kinesin motor, KIF1A
-
Kikkawa M., Okada Y., Hirokawa N. 15. Å resolution model of the monomeric kinesin motor, KIF1A Cell. 100:2000;241-252.
-
(2000)
Cell
, vol.100
, pp. 241-252
-
-
Kikkawa, M.1
Okada, Y.2
Hirokawa, N.3
-
26
-
-
0031687653
-
Anatomy of protein pockets and cavities: Measurement of binding site geometry and implications for ligand design
-
Liang J., Edelsbrunner H., Woodward C. Anatomy of protein pockets and cavities: measurement of binding site geometry and implications for ligand design. Protein Sci. 7:1998;1884-1897.
-
(1998)
Protein Sci.
, vol.7
, pp. 1884-1897
-
-
Liang, J.1
Edelsbrunner, H.2
Woodward, C.3
-
27
-
-
0032190305
-
Analytical shape computation of macromolecules I: Molecular area and volume through alpha shape
-
Liang J., Edelsbrunner H., Fu P., Sudhakar P.V. Analytical shape computation of macromolecules I: molecular area and volume through alpha shape. Proteins. 33:1998;1-17.
-
(1998)
Proteins
, vol.33
, pp. 1-17
-
-
Liang, J.1
Edelsbrunner, H.2
Fu, P.3
Sudhakar, P.V.4
-
28
-
-
18744362987
-
Analysis of the interaction between the eukaryotic chaperonin CCT and its substrates actin and tubulin
-
Llorca O., Martin-Benito J., Gómez-Puertas P., Ritco-Vonsovici M., Willison K.R., Carrascosa J.L., Valpuesta J.M. Analysis of the interaction between the eukaryotic chaperonin CCT and its substrates actin and tubulin. J. Struct. Biol. 135:2001;205-218.
-
(2001)
J. Struct. Biol.
, vol.135
, pp. 205-218
-
-
Llorca, O.1
Martin-Benito, J.2
Gómez-Puertas, P.3
Ritco-Vonsovici, M.4
Willison, K.R.5
Carrascosa, J.L.6
Valpuesta, J.M.7
-
29
-
-
0037062479
-
Domain movements in human fatty acid synthase by quantized elastic deformational model
-
Ming D., Kong Y., Wakil S.J., Brink J., Ma J. Domain movements in human fatty acid synthase by quantized elastic deformational model. Proc. Natl. Acad. Sci. USA. 99:2002;7895-7899.
-
(2002)
Proc. Natl. Acad. Sci. USA
, vol.99
, pp. 7895-7899
-
-
Ming, D.1
Kong, Y.2
Wakil, S.J.3
Brink, J.4
Ma, J.5
-
30
-
-
0035783172
-
Lumbricus terrestris hemoglobin - The architecture of linker chains and structural variation of the central toroid
-
Mouche F., Boisset N., Penczek P.A. Lumbricus terrestris hemoglobin - the architecture of linker chains and structural variation of the central toroid. J. Struct. Biol. 133:2001;176-192.
-
(2001)
J. Struct. Biol.
, vol.133
, pp. 176-192
-
-
Mouche, F.1
Boisset, N.2
Penczek, P.A.3
-
32
-
-
0032495513
-
Structure of the alpha beta tubulin dimer by electron crystallography
-
Nogales E., Wolf S.G., Downing K.H. Structure of the alpha beta tubulin dimer by electron crystallography. Nature. 391:1998;199-203.
-
(1998)
Nature
, vol.391
, pp. 199-203
-
-
Nogales, E.1
Wolf, S.G.2
Downing, K.H.3
-
33
-
-
0035825140
-
Molecular machines: Putting the pieces together
-
Nogales E., Grigorieff N. Molecular machines: putting the pieces together. J. Cell Biol. 152:2001;F1-F10.
-
(2001)
J. Cell Biol.
, vol.152
-
-
Nogales, E.1
Grigorieff, N.2
-
34
-
-
0020488742
-
Collective variable description of small-amplitude conformational fluctuations in a globular protein
-
Noguti T., Go N. Collective variable description of small-amplitude conformational fluctuations in a globular protein. Nature. 296:1982;668-776.
-
(1982)
Nature
, vol.296
, pp. 668-776
-
-
Noguti, T.1
Go, N.2
-
36
-
-
0026521233
-
Three-dimensional reconstruction of single particles embedded in ice
-
Penczek P., Radermacher M., Frank J. Three-dimensional reconstruction of single particles embedded in ice. Ultramicroscopy. 40:1992;33-53.
-
(1992)
Ultramicroscopy
, vol.40
, pp. 33-53
-
-
Penczek, P.1
Radermacher, M.2
Frank, J.3
-
37
-
-
0033536662
-
X-ray crystallographic structure of the Norwalk virus capsid
-
Prasad B.V., Hardy M.E., Dokland T., Bella J., Rossmann M.G., Estes M.K. X-ray crystallographic structure of the Norwalk virus capsid. Science. 286:1999;287-290.
-
(1999)
Science
, vol.286
, pp. 287-290
-
-
Prasad, B.V.1
Hardy, M.E.2
Dokland, T.3
Bella, J.4
Rossmann, M.G.5
Estes, M.K.6
-
38
-
-
0028375920
-
Three-dimensional reconstruction from random projections: Orientational alignment via Radon transforms
-
Radermacher M. Three-dimensional reconstruction from random projections: orientational alignment via Radon transforms. Ultramicroscopy. 53:1994;121-136.
-
(1994)
Ultramicroscopy.
, vol.53
, pp. 121-136
-
-
Radermacher, M.1
-
39
-
-
0034720237
-
Structure of the reovirus core at 3.6 Å resolution
-
Reinisch K.M., Nibert M.L., Harrison S.C. Structure of the reovirus core at 3.6. Å resolution Nature. 404:2000;960-967.
-
(2000)
Nature
, vol.404
, pp. 960-967
-
-
Reinisch, K.M.1
Nibert, M.L.2
Harrison, S.C.3
-
40
-
-
0035783162
-
Structures of unliganded and ATP-bound states of the Escherichia coli chaperonin GroEL by cryoelectron microscopy
-
Roseman A.M., Ranson N.A., Gowen B., Fuller S.D., Saibil H.R. Structures of unliganded and ATP-bound states of the Escherichia coli chaperonin GroEL by cryoelectron microscopy. J. Struct. Biol. 135:2001;115-125.
-
(2001)
J. Struct. Biol.
, vol.135
, pp. 115-125
-
-
Roseman, A.M.1
Ranson, N.A.2
Gowen, B.3
Fuller, S.D.4
Saibil, H.R.5
-
41
-
-
0033813317
-
Conformational changes studied by cryo-electron microscopy
-
Saibil H.R. Conformational changes studied by cryo-electron microscopy. Nat. Struct. Biol. 7:2000;711-714.
-
(2000)
Nat. Struct. Biol.
, vol.7
, pp. 711-714
-
-
Saibil, H.R.1
-
42
-
-
0035798380
-
Structure of the 80S ribosome from Saccharomyces cerevisiae - TRNA-ribosome and subunit-subunit interactions
-
Spahn C.M., Beckmann R., Eswar N., Penczek P.A., Sali A., Blobel G., Frank J. Structure of the 80S ribosome from Saccharomyces cerevisiae - tRNA-ribosome and subunit-subunit interactions. Cell. 107:2001;373-386.
-
(2001)
Cell
, vol.107
, pp. 373-386
-
-
Spahn, C.M.1
Beckmann, R.2
Eswar, N.3
Penczek, P.A.4
Sali, A.5
Blobel, G.6
Frank, J.7
-
43
-
-
0036848127
-
New electron microscopy database and deposition system
-
Tagari M., Newman R., Chagoyen M., Carazo J.M., Henrick K. New electron microscopy database and deposition system. Trends Biochem. Sci. 27:2002;589.
-
(2002)
Trends Biochem. Sci.
, vol.27
, pp. 589
-
-
Tagari, M.1
Newman, R.2
Chagoyen, M.3
Carazo, J.M.4
Henrick, K.5
-
44
-
-
0036382958
-
Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory
-
Tama F., Wriggers W., Brooks II C.L. Exploring global distortions of biological macromolecules and assemblies from low-resolution structural information and elastic network theory. J. Mol. Biol. 321:2002;297-305.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 297-305
-
-
Tama, F.1
Wriggers, W.2
Brooks II, C.L.3
-
45
-
-
0020073127
-
Normal vibrations of proteins: Glucagons
-
Tasumi M., Takeuchi H., Ataka S., Dwivedi A.M., Krimm S. Normal vibrations of proteins: glucagons. Biopolymers. 21:1982;711-714.
-
(1982)
Biopolymers
, vol.21
, pp. 711-714
-
-
Tasumi, M.1
Takeuchi, H.2
Ataka, S.3
Dwivedi, A.M.4
Krimm, S.5
-
46
-
-
0023102907
-
Angular reconstitution: A posteriori assignment of projection directions for 3D reconstruction
-
Van Heel M. Angular reconstitution: a posteriori assignment of projection directions for 3D reconstruction. Ultramicroscopy. 21:1987;111-123.
-
(1987)
Ultramicroscopy
, vol.21
, pp. 111-123
-
-
Van Heel, M.1
-
47
-
-
0032560170
-
Structure of the calcium pump from sarcoplasmic reticulum at 8-Å resolution
-
Zhang P., Toyoshima C., Yonekura K., Green N.M., Stokes D.L. Structure of the calcium pump from sarcoplasmic reticulum at 8-Å resolution. Nature. 392:1998;835-839.
-
(1998)
Nature
, vol.392
, pp. 835-839
-
-
Zhang, P.1
Toyoshima, C.2
Yonekura, K.3
Green, N.M.4
Stokes, D.L.5
-
48
-
-
0036827856
-
Placement of the structural proteins in Sindbis virus
-
Zhang W., Mukhopadhyay S., Pletnev S.V., Baker T.S., Kuhn R.J., Rossmann M.G. Placement of the structural proteins in Sindbis virus. J. Virol. 76:2002;11645-11658.
-
(2002)
J. Virol.
, vol.76
, pp. 11645-11658
-
-
Zhang, W.1
Mukhopadhyay, S.2
Pletnev, S.V.3
Baker, T.S.4
Kuhn, R.J.5
Rossmann, M.G.6
-
49
-
-
0034814786
-
Electron cryomicroscopy and bioinformatics suggest protein fold models for rice dwarf virus
-
Zhou Z.H., Baker M.L., Jiang W., Dougherty M., Jakana J., Dong G., Lu G., Chiu W. Electron cryomicroscopy and bioinformatics suggest protein fold models for rice dwarf virus. Nat. Struct. Biol. 8:2001;868-873.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 868-873
-
-
Zhou, Z.H.1
Baker, M.L.2
Jiang, W.3
Dougherty, M.4
Jakana, J.5
Dong, G.6
Lu, G.7
Chiu, W.8
-
50
-
-
0030960710
-
Three-dimensional reconstruction with contrast transfer function correction from energy-filtered cryoelectron micrographs: Procedure and application to the 70S Escherichia coli ribosome
-
Zhu J., Penczek P.A., Schroder R., Frank J. Three-dimensional reconstruction with contrast transfer function correction from energy-filtered cryoelectron micrographs: procedure and application to the 70S Escherichia coli ribosome. J. Struct. Biol. 118:1997;197-219.
-
(1997)
J. Struct. Biol.
, vol.118
, pp. 197-219
-
-
Zhu, J.1
Penczek, P.A.2
Schroder, R.3
Frank, J.4
|