Molecular typing of pathogens

Berliner und Munchener Tierarztliche Wochenschrift

Volumn 116, Issue 11-12, 2003, Pages 447-453

  Wassenaar, Trudy M ^a,b  

^a Molec Microbiol/Genom Consultants   (Germany)

^b Molecular Microbiology and Genomics Consultants   (Germany)

Author keywords

Clonality; Genotyping; MLST; Molecular epidemiology; Population genetics

Indexed keywords

BACTERIA; BACTERIAL TYPING TECHNIQUES; CONSUMER PRODUCT SAFETY; DNA, BACTERIAL; FOOD MICROBIOLOGY; GENES, BACTERIAL; GENOTYPE; HUMANS;

BACTERIA (MICROORGANISMS);

EID: 0344708504     PISSN: 00059366     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Conference Paper

References (24)

1. Achtman, M., Zurth, K., Morelli, G., Torrea, G., Guiyoule, A., Carniel, E. (1999a): Yersinia pestis, the cause of plague, is a recently emerged clone of Yersinia pseudotuberculosis. Proc. Natl. Acad. Sci. U.S.A. 96, 14043-14048. Erratum in: Proc. Natl. Acad. Sci. U.S.A (2000); 97, 8192.
2. Achtman, M., Azuma, T., Berg, D. E., Ito, Y., Morelli, G., Pan, Z. J., Suerbaum, S., Thompson, S. A., van der Ende, A., van Doorn, L. J. (1999b): Recombination and clonal groupings within Helicobacter pylori from different geographical regions. Mol. Microbiol. 32, 459-470.
3. van Belkum, A. (1994): DNA fingerprinting of medically important microorganisms by use of PCR. Clin. Microbiol. Rev. 7: 174-184.
4. Colding, H., Hartzen, S. H., Roshanisefat, H., Andersen, L. P., Krogfelt, K. A. (1999): Molecular methods for typing of Helicobacter pylori and their applications. FEMS Immunol. Med. Microbiol. 24, 193-199.
5. Dijkshoorn, L., Towner, K. J., Struelens, M. (Editors) New approaches for the generation and analysis of microbial typing data. Elsevier, 2001.
6. Dingle, K.E., Colles, F.M., Ure, R., Wagenaar, J. A., Duim, B., Bolton, F. J., Fox, A. J., Wareing, D. R., Maiden, M. C. (2002): Molecular characterization of Campylobacter jejuni clones: a basis for epidemiologic investigation. Emerg. Infect. Dis. 8, 9499-55.
7. Engberg, J., Nachamkin, I., Fussing, V., McKhann, G.M., Griffin, J. W., Piffaretti, J. C., Nielsen, E. M., Gerner-Smidt, P. (2001): Absence of clonality of Campylobacter jejuni in serotypes other than HS: 19 associated with Guillain-Barre syndrome and gastroenteritis. J. Infect. Dis. 184, 215-220.
8. Feng, P. (1996): Emergence of rapid methods for identifying microbial pathogens in foods. J AOAC Int. 79, 809-812.
9. Goldwater, P.N., Bettelheim, K.A. (1998): New perspectives on the role of Escherichia coli O157:H7 and other enterohaemorrhagic E. coli serotypes in human disease. J. Med. Microbiol. 47, 1039-1045.
10. Kathariou, S. (2002): Listeria monocytogenes virulence and pathogenicity, a food safety perspective. J. Food. Prot. 65, 1811-1829.
11. Manning, G., Duim, B., Wassenaar, T.M., Wagenaar, J.A., Ridley, A. & Newell, D.G. (2001): Evidence for a genetically stable clone of Campylobacter jejuni Appl. Environm. Microbiol. 67, 1185-1189.
12. Nachamkin, I., Engberg, J., Gutacker, M., Meinersman, R. J., Li, C. Y., Arzate, P., Teeple, E., Fussing, V., Ho, T. W., Asbury, A. K., Griffin, J. W., McKhann, G. M., Piffaretti, J. C. (2001): Molecular population genetic analysis of Campylobacter jejuni HS: 19 associated with Guillain-Barre syndrome and gastroenteritis. J. Infect. Dis. 184, 221-226.
13. Schloter, M., Lebuhn, M., Heulin, T., Hartmann, A. (2000): Ecology and evolution of bacterial microdiversity. FEMS Microbiol. Rev. 24, 647-660.
14. Tang, Y.W., Procop, G.W., Persing, D. H. (1997): Molecular diagnostics of infectious diseases. Clin. Chem. 43, 2021-2038.
15. Tannock, G.W. (2001): Molecular assessment of intestinal microflora. Am. J. Clin. Nutr. 73 (2 Suppl):410-414.
16. Tenover, F. C., Arbeit, R. D., Goering, R. V., Mickelsen, P. A., Murray, B. E., Persing, D. H., Swaminathan, B. (1995): Interpreting chromosomal DNA restriction patterns produced by pulsed-field gel electrophoresis: criteria for bacterial strain typing. J. Clin. Microbiol. 33, 2233-2239.
17. Sachse, K., Frey, J. (Editors). PCR Detection of Microbial Pathogens. Methods in Molecular Biology, Vol. 216. Humana Press, 2003.
18. Scott, T. M., Rose, J. B., Jenkins, T. M., Farrah, S. R., Lukasik, J. (2002): Microbial source tracking: current methodology and future directions. Appl. Environ. Microbiol. 68, 5796-5803.
19. Versalovic, J. & Lupski, J. R. (2002): Molecular detection and genotyping of pathogens: more accurate and rapid answers. Trends Microbiol. 10 (10 Suppl): S15-S21.
20. Wang, R. F., Beggs, M. L., Robertson, L. H., Cerniglia, C. E. (2002): Design and evaluation of oligonucleotide-microarray method for the detection of human intestinal bacteria in fecal samples. FEMS Microbiol. Lett. 213, 175-182.
21. Wassenaar, T. M., Newell, D.G. (2000): Genotyping methods of Campylobacter: a review. Appl. Environm. Microbiol. 66, 1-9.
22. Wassenaar, T. M., Lastovica, A., Duim, B., Wagenaar, J., Fry, B. (2000a): Genetic characterization of Campylobacter jejuni O:41 in relation to Guillain Barre Syndrome. J. Clin. Microbiol. 38, 874-876.
23. Wassenaar, T. M., On, S. L. W., Meinersmann, R. (2000b): Genotyping and the consequence of genetic instability. In: Campylobacter 2nd Edition. I. Nachamkin, and M. J. Blaser, Eds. ASM Press. pp 369-380.
24. Williams, D. W., Wilson, M. J., Lewis, M.A. (1999): Deoxyribonucleic acid typing methods for medically important microorganisms. Br. J. Biomed. Sci. 56, 56-65.