Different community structure and temperature optima of heterotrophic picoplankton in various regions of the Southern Ocean

Aquatic Microbial Ecology

Volumn 18, Issue 3, 1999, Pages 275-284

  Simon, Meinhard ^a   Glöckner, Frank Oliver ^b   Amann, Rudolf ^b  

^a UNIVERSITY OF OLDENBURG   (Germany)

^b MAX PLANCK INSTITUTE FOR MARINE MICROBIOLOGY   (Germany)

Author keywords

Heterotrophic picoplankton; In situ hybridization; Oligonucleotide probes; Psychrophilic bacteria; Southern Ocean; Temperature

Indexed keywords

COMMUNITY STRUCTURE; FLUORESCENT LABELING; IN SITU HYBRIDIZATION; MICROBIAL GROWTH; OLIGONUCLEOTIDE PROBE; PRODUCTIVITY; RIBOSOMAL RNA; RNA PROBE; TEMPERATURE;

CYTOPHAGA; FLAVOBACTERIUM; PHAEOCYSTIS;

EID: 0344132574     PISSN: 09483055     EISSN: None     Source Type: Journal    
DOI: 10.3354/ame018275     Document Type: Article

References (50)

1. Alfreider A, Pernthaler J, Amann R, Sattler B, Glöckner FO, Wille A, Psenner R (1996) Community analysis of the bacterial assemblage in the winter cover and pelagic layers of a high mountain lake by in situ hybridization. Appl Environ Microbiol 62:2138-2144
2. Amann RI, Krumholz , Stahl DA (1990) Fluorescent oligonucleotide probing of whole cells for deter-minative, phylogenetic, and environmental studies in microbiology. J Bacteriol 172:762-779
3. Amann RI, Ludwig W, Schleifer KH (1995) Identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59:143-169
4. Autio R (1992) Temperature regulation of brackish water bacterioplankton. Arch Hydrobiol Beih Ergebn Limnol 37: 253-263
5. Azam F, Ammerman JW, Cooper N (1981) Bacterioplankton distributional patterns and metabolic activities in the Scotia Sea. Antarct J US 16:164-165
6. Billen G, Becquevort S (1991) Phytoplankton-bacteria relationship in the Antarctic marine ecosystem. Polar Res 10: 245-253
7. Bjørnsen PK, Kuparinen J (1991) Determination of bacterioplankton biomass, net production and growth efficiency in the Southern Ocean. Mar Ecol Prog Ser 71:185-194
8. Bowman JP, McCammon SA, Brown MV, Nicols DS, McMeekin TA (1997) Diversity and association of psychrophilic bacteria in Antarctic sea ice. Appl Environ Microbiol 63:3068-3078
9. Chin-Leo G, Kirchman DL (1988) Estimating bacterial production in marine waters from the simultaneous incorporation of thymidine and leucine. Appl Environ Microbiol 54:1934-1939
10. Cota GF, Kottmeier ST, Robinson DH, Smith WO Jr, Sullivan CW (1990) Bacterioplankton in the marginal ice zone of the Weddell Sea: biomass, production and metabolic activities during austral autumn. Deep-Sea Res 37:1145-1167
11. Coveney MF, Wetzel RG (1995) Biomass, production, and specific growth rate of bacterioplankton and coupling to primary production in an oligotrophic lake. Limnol Oceanogr 40:1187-1200
12. DeLong EF, Wu KY, Prezelin BB, Jovine RM (1994) High abundance of Archaea in Antarctic marine picoplankton. Nature 371:695-697
13. Ducklow HW, Carlson CA (1992) Oceanic bacterial production. Adv Microb Ecol 12:113-181
14. Ducklow HW, Kirchman DL, Quinby HL, Carlson CA, Dam HG (1993) Bacterioplankton carbon cycling during the spring bloom in the eastern North Atlantic Ocean. Deep-Sea Res 40:245-263
15. Fuhrman JA, Azam F (1980) Bacterioplankton secondary production estimates for coastal waters ot British Columbia, Antarctica, and California. Appl Environ Microbiol 39: 1085-1095
16. Fuhrman JA, McCallum K, Davis AA (1993) Phylogenetic diversity of subsurface marine microbial communities from the Atlantic and Pacific Ocean. Appl Environ Microbiol 59:1294-1302
17. Giovannoni SJ, Britschgi TB, Moyer CL, Field KG (1990) Genetic diversity in Sargasso Sea bacterioplankton. Nature 345:60-63
18. Glöckner FO, Amann R, Alfreider A, Pernthaler J, Psenner R, Trebesius K, Schleifer KH (1996) An in situ hybridization protocol for detection and identification of planktonic bacteria. Syst Appl Microbiol 19:403-406
19. Harder W, Veldkamp H (1971) Competition of marine psychrophilic bacteria at low temperatures. Antonie van Leeuwenhoek 37:51-63
20. Helmke E, Weyland H (1995) Bacteria in sea ice and underlying water of the eastern Weddell Sea in midwinter. Mar Ecol Prog Ser 117:269-287
21. Hodson RE, Azam F, Carlucci AF, Fuhrman JA, Karl DM, Holm-Hansen O (1981) Microbial uptake of dissolved organic matter in McMurdo Sound, Antarctica. Mar Biol 61:89-94
22. Kang SH, Fryxell GA (1993) Phytoplankton in the Weddell Sea, Antarctica: composition, abundance and distribution in water column assemblages of the marginal ice-edge zone during austral spring. Mar Biol 116:335-348
23. Karentz D, Spero HJ (1995) Response of a natural Phaeocystis population to ambient fluctuations of UVB radiation caused by Antarctic ozone depletion. J Plankton Res 17: 1771-1789
24. Kirchman DL, K'nees E, Hodson RE (1985) Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural systems. Appl Environ Microbiol 49: 599-607
25. Kirchman DL, Keil RG, Simon M, Welschmeyer NA (1993) Biomass and production of heterotrophic bacterioplankton in the oceanic subarctic Pacific. Deep-Sea Res 40:967-988
26. Lochte K, Bjørnsen PK, Mathot S, Becguevort S (1994) Experiments on the effect of temperature (-2°C to +3°C) on phytoplankton and bacterioplankton production. Rep Polar Res Alfred-Wegener-Institute Polar Mar Res 135: 91-93
27. Lochte K, Bjørnsen PK, Giesenhagen H, Weber A (1997) Bacterial standing stock and production and their relation to phytoplankton in the Southern Ocean. Deep-Sea Res 44: 321-340
28. Lovell CR, Konopka A (1985) The effects of temperature on bacterial production in a dimictic eutrophic lake. FEMS Microbiol Ecol 31:135-140
29. Manz W, Amann R, Ludwig W, Wagner M, Schleifer KH (1992) Phylogenetic oligonucleotide probes for the major subclasses of Proteobacteria: problems and solutions. System Appl Microbiol 15:593-600
30. Manz W, Amann R, Ludwig W, Vancanneyt M, Schleifer KH (1996) Application of a suite of 16S rRNA-specific oligonucleotide probes designed to investigate bacteria of the phylum cytophaga-flavobacter-bacteroides in the natural environment. Microbiol 142:1097-1106
31. Massana R, Taylor LT, Murray AE, Wu KY, Jeffrey WH, DeLong EF (1998) Vertical distribution and temporal variation of marine plankton archaea in the Gerlache Strait, Antarctica, during early spring. Limnol Oceanogr 43: 607-616
32. Morita RY (1975) Psychrophilic bacteria. Bact Rev 39:144-167
33. Morris DP, Lewis WR (1992) Nutrient limitation of bacterioplankton growth in Lake Dillon, Colorado. Limnol Oceanogr 37:1179-1192
34. Mullins TD, Britschgi TB, Krest RL, Giovannoni SJ (1995) Genetic comparison reveals the same unknown bacterial lineages in Atlantic and Pacific bacterioplankton communities. Limnol Ocanogr 40:148-158
35. Murray AE, Preston CM, Massana R, Taylor LT, Blakis A, Wu KY, DeLong EF (1998) Seasonal and spatial variability of bacterial and archaeal assemblages in the coastal waters near Anvers Island, Antarctica. Appl Environ Microbiol 64:2585-2595
36. Neef A (1997) Anwendung der in situ Einzelzellidentifizierung von Bakterien zur Populationsanalyse in komplexen mikrobiellen Biozönosen. Doctoral Thesis, Technische Universität München, Munich
37. Ouverney CC, Fuhrman JA (1997) Increase in fluorescence intensity of 16S rRNA in situ hybridization in natural samples treated with chloramphenicol. Appl Environ Microbiol 63:2735-2740
38. Pernthaler J, Glöckner FO, Unterholzer S, Alfreider A, Psenner R, Amann R (1998) Seasonal community and population dynamics of pelagic bacteria and archaea in a high mountain lake. Appl Environ Microbiol 64: 4299-4306
39. Pomeroy LR, Deibel D (1986) Temperature regulation of bacterial activity during the spring bloom in Newfoundland coastal waters. Science 233:359-361
40. Putt M, Micełi G, Stoecker DK (1994) Association of bacteria with Phaeocystis sp. in McMurdo Sound, Antarctica. Mar Ecol Prog Ser 105:1779-1789
41. Schweitzer B, Simon M (1995) Limiting nutrients for bacterioplankton growth in a mesotrophic temperate large lake. Microb Ecol 30:89-104
42. Sherr EB, Sherr BF (1996) Temporal offset in oceanic production and respiration processes implied by seasonal changes in atmospheric oxygen: the role of heterotrophic microbes. Aquat Microb Ecol 11:91-100
43. Shiah FK, Ducklow HW (1994) Temperature and substrate regulation of bacterial abundance, production and specific growth rate in Chesapeake Bay, USA. Mar Ecol Prog Ser 103:297-308
44. Simon M, Azam F (1989) Protein content and protein synthesis rates of planktonic marine bacteria. Mar Ecol Prog Ser 51:201-213
45. Simon M, Wünsch C (1998) Temperature control of bacterioplankton growth in a temperate large and deep mesotrophic lake. Aquat Microb Ecol 16:119-130
46. Tibbles BJ (1997) Effects of temperature on the relative incorporation of leucine and thymidine by bacterioplankton and bacterial isolates. Aquat Microb Ecol 11:239-250
47. Wagner M, Amann R, Lemmer H, Schleifer KH (1993) Probing activated sludge with oligonucleotides specific for Proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure. Appl Environ Microbiol 59:1520-1525
48. Weiss P, Schweitzer B, Amann R, Simon M (1996) Identification in situ and dynamics of bacteria on limnetic organic aggregates (Lake Snow). Appl Environ Microbiol 62: 1998-2005
49. Wiebe WJ, Sheldon WM Jr, Pomeroy LR (1992) Evidence for enhanced substrate requirement by marine mesophilic bacterial isolates at minimum growth temperature. Microb Ecol 25:151-159
50. Wiebe WJ, Sheldon WM Jr, Pomeroy LR (1993) Bacterial growth in the cold: evidence for an enhanced substrate requirement. Appl Environ Microbiol 58:359-364