Polyphyly of the spring-parsleys (Cymopterus): Molecular and morphological evidence suggests complex relationships among the perennial endemic genera of western North American Apiaceae

Canadian Journal of Botany

Volumn 80, Issue 12, 2002, Pages 1295-1324

  Downie, Stephen R ^a   Hartman, Ronald L ^b   Sun, Feng Jie ^a   Katz Downie, Deborah S ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

^b UNIVERSITY OF WYOMING   (United States)

Author keywords

Apiaceae; Cymopterus; ITS; Morphology; Phylogeny; rps16 intron

Indexed keywords

DNA; DNA SEQUENCES; FRUITS; MOLECULAR BIOLOGY; MORPHOLOGY;

PERENNIAL GENERA;

PLANTS (BOTANY);

MOLECULAR ANALYSIS; MORPHOLOGY; PHYLOGENY;

NORTH AMERICA;

ALETES; APIACEAE; APIALES; APIOIDEAE; CYMOPTERUS; EMBRYOPHYTA; LOMATIUM; MUSINEON; OREOXIS; PETROSELINUM CRISPUM; PSEUDOCYMOPTERUS; PTERYXIA; TAUSCHIA;

EID: 0242585432     PISSN: 00084026     EISSN: None     Source Type: Journal    
DOI: 10.1139/b02-119     Document Type: Article

References (95)

1. Baldwin, B.G., Sanderson, M.J., Porter, J.M., Wojciechowski, M.F., Campbell, C.S., and Donoghue, M.J. 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Ann. Mo. Bot. Gard. 82: 247-277.
2. Barrie, F.R., and Schlessman, M.A. 1987. The incidence of protogyny in the North American species of Apioideae (Apiaceae). Am. J. Bot. 74: 646. (Abstract).
3. Bell, C.R., and Constance, L. 1957. Chromosome numbers in Umbelliferae. Am. J. Bot. 44: 565-572.
4. Bell, C.R., and Constance, L. 1960. Chromosome numbers in Umbelliferae. II. Am. J. Bot. 47: 24-32.
5. Bell, C.R., and Constance, L. 1966. Chromosome numbers in Umbelliferae. III. Am. J. Bot. 53: 512-520.
6. Berenbaum, M.R. 1981. Evolution of specialization in insect-umbellifer associations. Annu. Rev. Entomol. 35: 319-343.
7. Berenbaum, M.R. 2001. Chemical mediation of coevolution: phylogenetic evidence for Apiaceae and associates. Ann. Mo. Bot. Gard. 88: 45-59.
8. Brehm, B.G., and French, D.H. 1966. Chemical evidence for genetic exchange in Lomatium (Umbelliferae). Am. J. Bot. 53: 637. (Abstract).
9. Brummitt, R.K., and Powell, C.E. 1992. Authors of plant names. Royal Botanic Gardens, Kew, U.K.
10. Catalán, M.P., Kellogg, E.A., and Olmstead, R.G. 1997. Phylogeny of Poaceae subfamily Pooideae based on chloroplast ndhF gene sequences. Mol. Phylogenet. Evol. 8: 150-166.
11. Clarke, J.F.G. 1952. Host relationships of moths of the genera Depressaria and Agonopteryx, with descriptions of new species. Smithson. Misc. Collect. 117(7): 1-20.
12. Coulter, J.M., and Rose, J.N. 1888. Revision of North American Umbelliferae. pp. 144. Wabash College, Crawfordsville, Ind.
13. Coulter, J.M., and Rose, J.N. 1900. Monograph of the North American Umbelliferae. Contrib. U.S. Natl. Herb. 7: 1-256.
14. Crawford, D.J., and Hartman, R.L. 1972. Chromosome numbers and taxonomic notes for Rocky Mountain Umbelliferae. Am. J. Bot. 59: 386-392.
15. Cronquist, A. 1961. Umbelliferae. In Vascular plants of the Pacific Northwest. Edited by C.L. Hitchcock, A. Cronquist, M. Ownbey, and J.W. Thompson. Univ. Wash. Publ. Biol. 17(3): 506-586.
16. Cronquist, A. 1982. Reduction of Pseudotaenidia to Taenidia (Apiaceae). Brittonia, 34: 365-367.
17. Cronquist, A. 1997. Apiaceae. In Intermountain flora: vascular plants of the Intermountain West, U.S.A. Vol. 3, part A. Edited by A. Cronquist, N. H. Holmgren, and P. K. Holmgren. New York Botanical Garden, Bronx, N.Y.
18. Davis, P.H. 1972. Umbelliferae. In Flora of Turkey and the East Aegean Islands. Vol. 4. University Press, Edinburgh. pp. 265-538.
19. Downie, S.R., and Katz-Downie, D.S. 1996. A molecular phylogeny of Apiaceae subfamily Apioideae: evidence from nuclear ribosomal DNA internal transcribed spacer sequences. Am. J. Bot. 83: 234-251.
20. Downie, S.R., and Katz-Downie, D.S. 1999. Phylogenetic analysis of chloroplast rps16 intron sequences reveals relationships within the woody southern African Apiaceae subfamily Apioideae. Can. J. Bot. 77: 1120-1135.
21. Downie, S.R., Katz-Downie, D.S., and Cho, K.-J. 1996. Phylogeneric analysis of Apiaceae subfamily Apioideae using nucleotide sequences from the chloroplast rpoC1 intron. Mol. Phylogenet. Evol. 6: 1-18.
22. Downie, S.R., Katz-Downie, D.S., and Spalik, K. 2000a. A phylogeny of Apiaceae tribe Scandiceae: evidence from nuclear ribosomal DNA internal transcribed spacer sequences. Am. J. Bot. 87: 76-95.
23. Downie, S.R., Katz-Downie, D.S., and Watson, M.F. 2000b. A phylogeny of the flowering plant family Apiaceae based on chloroplast DNA rp116 and rpoC1 intron sequences: towards a suprageneric classification of subfamily Apioideae. Am. J. Bot. 87: 273-292.
24. Downie, S.R., Watson, M.F., Spalik, K., and Katz-Downie, D.S. 2000c. Molecular systematics of Old World Apioideae (Apiaceae): relationships among some members of tribe Peucedaneae sensu lato, the placement of several island-endemic species, and resolution within the apioid superclade. Can. J. Bot. 78: 506-528.
25. Downie, S.R., Ramanath, S., Katz-Downie, D.S., and Llanas, E. 1998. Molecular systematics of Apiaceae subfamily Apioideae: phylogenetic analyses of nuclear ribosomal DNA internal transcribed spacer and plastid rpoC1 intron sequences. Am. J. Bot. 85: 563-591.
26. Downie, S.R., Plunkett, G.M., Watson, M.F., Spalik, K., Katz-Downie, D.S., Valiejo-Roman, C.M., Terentieva, E.I., Troitsky, A.V., Lee, B.-Y., Lahham, J., and El-Oqlah, A. 2001. Tribes and clades within Apiaceae subfamily Apioideae: the contribution of molecular data. Edinb. J. Bot. 58: 301-330.
27. Evert, E.F., and Constance, L. 1982. Shoshonea pulvinata, a new genus and species of Umbelliferae from Wyoming. Syst. Bot. 7: 471-475.
28. Farris, J.S., Källersjö, M., Kluge, A.G., and Bult, C. 1995. Testing significance of incongruence. Cladistics, 10: 315-319.
29. Felsenstein, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 17: 368-376.
30. Felsenstein, J. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution, 39: 783-791.
31. Futuyma, D.J. 1997. Evolutionary biology, 3rd ed. Sinauer, Sunderland, Mass.
32. Gielly, L., and Taberlet, P. 1994. The use of chloroplast DNA to resolve plant phylogenies: noncoding versus rbcL sequences. Mol. Biol. Evol. 11: 769-777.
33. Gilmartin, A.J., and Simmons, K.S. 1987. Relationships of Lomatium among other genera of Apiaceae. Plant Syst. Evol. 157: 95-103.
34. Hardig, T.M., and Soltis, P.S. 1999. An ITS-based phylogenetic analysis of the Euryptera species group in Lomatium (Apiaceae). Plant Syst. Evol. 219: 65-78.
35. Hartman, R.L. 1983. Two novelties in the Umbelliferae from the central Rocky Mountains. Am. J. Bot. 70(6): 116. (Abstract).
36. Hartman, R.L. 1985. A new species of Cymopterus (Umbelliferae) from southern Idaho. Brittonia, 37: 102-105.
37. Hartman, R.L. 1986. Studies in Rocky Mountain species of Cymopterus (Apiaceae). Am. J. Bot. 73: 765-766. (Abstract).
38. Hartman, R.L. 2000. A new species of Cymopterus (Apiaceae) from the Rocky Mountain region, U.S.A. Brittonia, 52: 136-141.
39. Hartman, R.L., and Constance, L. 1985. Two new species of Cymopterus (Umbelliferae) from western North America. Brittonia, 37: 88-95.
40. Hershkovitz, M.A., and Zimmer, E.A. 2000. Ribosomal DNA evidence and disjunctions of western American Portulacaceae. Mol. Phylogenet. Evol. 15: 419-439.
41. Heywood, V.H. 1971. Systematic survey of Old World Umbelliferae. In The biology and chemistry of the Umbelliferae. Edited by V.H. Heywood. Academic Press, New York. pp. 31-42.
42. Heywood, V.H. 1982. General introduction to the taxonomy of the Umbelliferae. In Les Ombellifères: contributions pluridisciplinaires à la systématique. Actes du 2ème Symposium International sur les Ombellifères. Edited by A.-M. Cauwet-Marc and J. Carbonnier. Braun-Brumfield, Inc., Ann Arbor, Mich. Monogr. Syst. Bot. Mo. Bot. Gard. No. 6. pp. 107-112.
43. Heywood, V.H. 1986. The Umbelliferae: An impossible family? Acta Univ. Ups. Symb. Bot. Ups. 26: 173-180.
44. Hitchcock, C.L., and Cronquist, A. 1961. Vascular plants of the Pacific Northwest, Part 3: Saxifragaceae to Ericaceae. Univ. Wash. Publ. Biol., Vol. 17. pp. 506-587.
45. Hodges, R.W. 1974. Gelechoidea: Oecophoridae. In The moths of America north of Mexico. Edited by R.B. Dominick, D.C. Ferguson, J.G. Franclemont, R.W. Hodges, and E.G. Munroe. E. W. Classey Ltd., London.
46. Holmgren, P.K., Holmgren, N.H., and Barnett, L.C. 1990. Index herbariorum. New York Botanical Garden, New York.
47. Jensen, J.S. 1990. Plausibility and testability: assessing the consequences of evolutionary innovation. In Evolutionary novelties. Edited by M.N. Nitecki. University of Chicago Press, Chicago, Ill. pp. 171-190.
48. Jones, M.E. 1908. New species and notes. Contrib. West. Bot. 12: 1-81.
49. Kartesz, J.T. 1994. A synonymized checklist of the vascular flora of the United States, Canada, and Greenland, 2nd ed. Biota of the North American Program of the North Carolina Botanical Garden. Timber Press, Portland, Oreg.
50. Katz-Downie, D.S., Valiejo-Roman, C.M., Terentieva, E.I., Troitsky, A.V., Pimenov, M.G., Lee, B., and Downie, S.R. 1999. Towards a molecular phylogeny of Apiaceae subfamily Apioideae: additional information from nuclear ribosomal DNA ITS sequences. Plant Syst. Evol. 216: 167-195.
51. Lee, B.-Y., and Downie, S.R. 1999. A molecular phylogeny of Apiaceae tribe Caucalideae and related taxa: inferences based on ITS sequence data. Syst. Bot. 24: 461-479.
52. Lee, B.-Y., and Downie, S.R. 2000. Phylogenetic analysis of cpDNA restriction sites and rps16 intron sequences reveals relationships among Apiaceae tribes Caucalideae, Scandiceae and related taxa. Plant Syst. Evol. 221: 35-60.
53. Lidén, M., Fukuhara, T., Rylander, J., and Oxelman, B. 1997. Phylogeny and classification of Fumariaceae, with emphasis on Dicentra s. 1., based on the plastid gene rps16 intron. Plant Syst. Evol. 206: 411-420.
54. Lindsey, A.H. 1982. Floral phenology patterns and breeding systems in Thaspium and Zizia (Apiaceae). Syst. Bot. 7: 1-12.
55. Lindsey, A.H., and Bell, C.R. 1980. Protogyny and associated reproductive characters in Apiaceae. Proceedings of the Second International Congress of Systematic and Evolutionary Biology, July 17-24, 1980, The University of British Columbia, Vancouver, B.C. p. 269. (Abstract).
56. Maddison, W.P., and Maddison, D.R. 1992. MacClade: Analysis of phylogeny and character evolution, version 3 edition. Sinauer Associates, Sunderland, Mass.
57. Mastrogiuseppe, J.D., Gill, S.J., Simmons, K.S., and Brown, G.K. 1985. Morphologic and cytotaxonomic evaluation of Lomatium tuberosum (Apiaceae). Brittonia, 37: 252-260.
58. Mathias, M.E. 1930. Studies in the Umbelliferae. III. A monograph of Cymopterus including a critical study of related genera. Ann. Mo. Bot. Gard. 17: 213-476.
59. Mathias, M.E. 1965. Distribution patterns of certain Umbelliferae. Ann. Mo. Bot. Gard. 52: 387-398.
60. Mathias, M.E., and Constance, L. 1944-1945. Umbelliferae. In North American flora, Vol. 28B. The New York Botanical Garden, New York. pp. 43-295.
61. Mathias, M.E., and Constance, L. 1959. New North American Umbelliferae - III. Bull. Torrey Bot. Club, 86: 374-382.
62. McKenna, D.D. 2000. Ecology, phylogeny, and host-usage of North American Depressaria (Lepidoptera: Elachistidae). M.Sc. thesis, Department of Entomology, University of Illinois at Urbana-Champaign, Ill.
63. Michel, F., Umesono, K., and Ozeki, H. 1989. Comparative and functional anatomy of group II catalytic introns - a review. Gene (Amst.), 82: 5-30.
64. Moore, D.M. 1971. Chromosome studies in the Umbelliferae. In The biology and chemistry of the Umbelliferae. Edited by V.H. Heywood. Academic Press, New York. pp. 233-255.
65. Murray, R.D.H., Méndez, J., and Brown, S.A. 1982. The natural coumarins: occurrence, chemistry and biochemistry. Wiley and Sons, New York.
66. Neuhaus, H., Scholz, A., and Link, G. 1989. Structure and expression of a split chloroplast gene from mustard (Sinapsis alba): ribosomal protein gene rps16 reveals unusual transcriptional features and complex RNA maturation. Curr. Genet. 15: 63-70.
67. Oxelman, B., Lidén, M., and Berglund, D. 1997. Chloroplast rps16 intron phylogeny of the tribe Sileneae (Caryophyllaceae). Plant Syst. Evol. 206: 393-410.
68. Petersen, G., Seberg, O., and Larsen, S. 2002. The phylogenetic and taxonomic position of Lilaeopsis (Apiaceae), with notes on the applicability of ITS sequence data for phylogenetic reconstruction. Aust. Syst. Bot. 15: 181-191.
69. Plunkett, G.M., and Downie, S.R. 1999. Major lineages within Apiaceae subfamily Apioideae: a comparison of chloroplast restriction site and DNA sequence data. Am. J. Bot. 86: 1014-1026.
70. Plunkett, G.M., Soltis, D.E., and Soltis, P.S. 1996. Evolutionary patterns in Apiaceae: inferences based on matK sequence data. Syst. Bot. 21: 477-495.
71. Posada, D., and Crandall, K.A. 1998. Modeltest: testing the model of DNA substitution. Bioinformatics, 14: 817-818.
72. Radford, A.E., Dickison, W.C., Massey, J.R., and Bell, C.R. 1974. Vascular plant systematics. Harper and Row, New York.
73. Schlessman, M.A. 1984. Systematics of tuberous lomatiums (Umbelliferae). Sys. Bot. Monogr. 4: 55.
74. Schlessman, M.A., and Barrie, F.R. 2003. Dichogamy and sex expression of North American apioid Apiaceae (Apiaceae, Apioideae). In Apiales 2003: 4th International Apiales Symposium, held in conjunction with the 29th Conference of the South African Association of Botanists, Pretoria, South Africa January 6-7, 2003. (Abstract).
75. Schlessman, M.A., and Graceffa, L.M. 2002. Protogyny, pollination, and sex expression of andromonoecious Pseudocymopterus montanus (Apiaceae, Apioideae). Int. J. Plant Sci. 163: 409-417.
76. Schlessman, M.A., Lloyd, D.G., and Lowry II, P.P. 1990. Evolution of sexual systems in New Caledonian Apiaceae. Mem. N. Y. Bot. Gard. 55: 105-117.
77. Simmons, K. S. 1985. Systematic studies in Lomatium. Ph.D. thesis, Washington State University, Pullman, Wash.
78. Soltis, P.S., and Kuzoff, R.K. 1993. ITS sequence variation within and among populations of Lomatium grayi and L. laevigatum (Umbelliferae). Mol. Phylogenet. Evol. 2: 166-170.
79. Soltis, P.S., and Novak, S.J. 1997. Phylogeny of the tuberous Lomatiums (Apiaceae): cpDNA evidence for morphological convergence. Syst. Bot. 22: 99-112.
80. Soltis, P.S., Novak, S.J., Hardig, T.M., and Soltis, D.E. 1995. Phylogenetic relationships and rapid radiation in Lomatium (Apiaceae). Am. J. Bot. 82 (6): 163 (Abstract).
81. Spalik, K., and Downie, S.R. 2001. The utility of morphological characters for inferring phylogeny in Scandiceae subtribe Scandicinae (Apiaceae). Ann. Mo. Bot. Gard. 88: 270-301.
82. Spalik, K., Wojewódzka, A., and Downie, S.R. 2001a. The evolution of fruit in Scandiceae subtribe Scandicinae (Apiaceae). Can. J. Bot. 79: 1358-1374.
83. Spalik, K., Wojewódzka, A., and Downie, S.R. 2001b. Delimitation of genera in Apiaceae with examples from Scandiceae subtribe Scandicinae. Edinb. J. Bot. 58: 331-346.
84. Sun, F.-J., Downie, S.R., and Hartman, R.L. 2000. A phylogenetic study of Cymopterus and related genera. Am. J. Bot. 87 (6): 161-162 (Abstract).
85. Swofford, D.L. 1998. PAUP*. Phylogenetic analysis using parsimony (*and other methods), version 4 edition. Sinauer Associates, Sunderland, Mass.
86. Taberlet, P., Gielly, L., Pautou, G., and Bouvet, J. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Mol. Biol. 17: 1105-1109.
87. Tamura, K., and Nei, M. 1993. Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees. Mol. Biol. Evol. 10: 512-526.
88. Theobald, W.L. 1971. Comparative anatomical and developmental studies in the Umbelliferae. In The biology and chemistry of the Umbelliferae. Edited by V. H. Heywood. Academic Press, New York. pp. 177-197.
89. Theobald, W.L., Tseng, C.C., and Mathias, M.E. 1963. A revision of Aletes and Neoparrya (Umbelliferae). Brittonia, 16: 296-315.
90. Thompson, J.N. 1983. The use of ephemeral plant parts on small hostplants: How Depressaria leptotaeniae (Lepidoptera: Oecophoridae) feeds on Lomatium dissectum (Umbelliferae). J. Anim. Ecol. 52: 281-291.
91. Torrey, J., and Gray, A. 1840. A flora of North America. Vol. 1. Hafner Publ. Co., New York. pp. 598-645.
92. Webb, C.J. 1984. Pollination specialization and protogyny in Myrrhidendron donnellsmithii (Umbelliferae). Syst. Bot. 9: 240-246.
93. Weber, W.A. 1984. New names and combinations, principally in the Rocky Mountain flora. IV. Phytologia, 55: 1-11.
94. Weber, W.A. 1991. New names and combinations, principally in the Rocky Mountain flora. VIII. Phytologia, 70: 231-233.
95. Weber, W.A., and Wittmann, R.C. 1992. Catalog of the Colorado flora: a biodiversity baseline. University Press of Colorado, Boulder, Colo.