A molecular phylogeny of Apiaceae tribe Caucalideae and related taxa: Inferences based on ITS sequence data

Systematic Botany

Volumn 24, Issue 3, 1999, Pages 461-479

  Lee, Byoung Yoon ^a   Downie, Stephen R ^a  

^a UNIVERSITY OF ILLINOIS AT URBANA CHAMPAIGN   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AGROCHARIS; AMMODAUCUS; ANGOSESELI; ANTHRISCUS; APHANOPLEURA; APIACEAE; ARTEDIA; ASTRODAUCUS; CAUCALIS; CHAETOSCIADIUM; CUMINUM; CUMINUM CYMINUM; DAUCUS; GLOCHIDOTHECA; KOZLOVIA; LASERPITIUM; LISAEA; MYRRHIS; ORLAYA; OSMORHIZA; PACHYCTENIUM; POLYLOPHIUM; PSAMMOGETON; PSEUDORLAYA; SCANDICEAE; SCANDIX; SMYRNIEAE; SZOVITSIA; TORILIS; TURGENIA; YABEA;

EID: 0032752429     PISSN: 03636445     EISSN: None     Source Type: Journal    
DOI: 10.2307/2419700     Document Type: Article

References (55)

1. AL-ATTAR, A. 1974. Studies in the systematic anatomy, embryology and morphology of the Umbelliferae tribe Caucalideae. Ph. D. thesis, University of Reading, Reading.
2. BALDWIN, B. G., M. J. SANDERSON, J. M. PORTER, M. F. WOJCIECHOWSKI, C. S. CAMPBELL, and M. J. DONOGHUE. 1995. The ITS region of nuclear ribosomal DNA: a valuable source of evidence on angiosperm phylogeny. Annals of the Missouri Botanical Garden 82: 247-277.
3. BENTHAM, G. 1867. Umbelliferae. In G. Bentham and J. D. Hooker [eds.], Genera Plantarum 1: 859-931. Reeve, London.
4. BOISSIER, E. 1872. Umbelliferae. In Flora orientalis 2: 819-1090. Georg, Genève.
5. BREMER, K. 1988. The limits of amino acid sequence data in angiosperm phylogenetic reconstruction. Evolution 42: 795-803.
6. CALESTANI, V. 1905. Contributo alla sistematica delle Ombrellifere d'europa. Webbia 1: 89-280.
7. CANNON, J. F. M. 1967. The generic limits of Caucalis and Torilis. In V. H. Heywood [ed.], Flora Europaea, Notulae Systematicae No. 6. Feddes Repertorium 74: 36-37.
8. _. 1968. Torilis. In T. G. Tutin, V. H. Heywood, N. A. Burgess, D. M. Moore, D. H. Valentine, S. M. Walters, and D. A. Webb [eds.], Flora Europaea 2, 371-372. Cambridge University Press, England.
9. ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique." Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. BraunBrumfield, Ann Arbor, MI.
10. CERCEAU-LARRIVAL, M.-TH. 1962. Plantules et pollens d'Ombellifères. Leur intérêt systématique et phylogénique. Thèse. Mémoires du Muséum National d'Histoire Naturelle, sér. B, vol. 14, 1-166.
11. _. 1965. Le pollen d'Ombellifères Méditerranéennes. III. - Scandicineae Drude. IV. - Dauceae Drude. Pollen et Spores 7: 35-62.
12. CONSTANCE, L., T.-I. CHUANG, and C. R. BELL. 1971. Chromosome numbers in Umbelliferae. IV. American Journal of Botany 58: 577-587.
13. CROWDEN, R. K., J. B. HARBORNE, and V. H. HEYWOOD. 1969. Chemosystematics of the Umbelliferae - a general survey. Phytochemistry 8: 1963-1984.
14. DOWNIE, S. R. and D. S. KATZ-DOWNIE. 1996. A molecular phylogeny of Apiaceae subfamily Apioideae: evidence from nuclear ribosomal DNA internal transcribed spacer sequences. American Journal of Botany 83: 234-251.
15. _, _, and K.-J. CHO. 1996. Phylogenetic analysis of Apiaceae subfamily Apioideae using nucleotide sequences from the chloroplast rpoC1 intron. Molecular Phylogenetics and Evolution 6: 1-18.
16. _, S. RAMANATH, D. S. KATZ-DOWNIE, and E. LLANAS. 1998. Molecular systematics of Apiaceae subfamily Apioideae: phylogenetic analyses of nuclear ribosomal DNA internal transcribed spacer and plastid rpoCl intron sequences. American Journal of Botany 85: 563-591.
17. DOYLE, J. J. and J. L. DOYLE. 1987. A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochemistry Bulletin 19: 11-15.
18. DRUDE, O. 1897-1898. Umbelliferae. In A. Engler and K. Prantl [eds.], Die natürlichen Pflanzenfamilien 3: 63-250. Wilhelm Engelmann, Leipzig.
19. FARRIS, J. S. 1989. The retention index and homoplasy excess. Systematic Zoology 38: 406-407.
20. FELSENSTEIN, J. 1981. Evolutionary trees from DNA sequences: a maximum likelihood approach. Journal of Molecular Evolution 17: 368-376.
21. _. 1985. Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39: 783-791.
22. _. 1993. PHYLIP (Phylogeny Inference Package). Distributed by the author. Department of Genetics, University of Washington, Seattle, WA.
23. GUYOT, M., M.-TH. CERCEAU-LARRIVAL, M.-C. CARBONNIER-JARREAU, L. DEROUET, and J. RELOT. 1980. Corrélations entre types stomatiques et types polliniques dans la tribu des Caucalidées (Ombellifères). Bulletin du Muséum National d'Histoire Naturelle, Section B 4: 341-385.
24. HARBORNE, J. B., and C. A. WILLIAMS. 1972. Flavonoid patterns in the fruits of the Umbelliferae. Phytochemistry 11: 1741-1750.
25. HEYWOOD, V. H. 1971a. The biology and chemistry of the Umbelliferae. Academic Press, New York, NY.
26. _. 1971b. Systematic survey of Old World Umbelliferae. In V. H. Heywood [ed.], The biology and chemistry of the Umbelliferae, 31-41. Academic Press, New York, NY.
27. _. 1973. The taxonomic position of Agrocharis Hochst. and allied genera. Notes from the Royal Botanic Garden Edinburgh 32: 211-215.
28. ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique," 1-4. Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. Braun-Brumfield, Ann Arbor, MI.
29. ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique," 107-112. Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. Braun-Brumfield, Ann Arbor, MI.
30. ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique," 727-736. Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. Braun-Brumfield, Ann Arbor, MI.
31. _. 1986. The Umbelliferae - an impossible family? Symbolae Botanicae Upsalienses 26: 173-180.
32. _ and K. M. M. DAKSHINI. 1971. Fruit structure in the Umbelliferae - Caucalideae. In V. H. Heywood [ed.], The biology and chemistry of the Umbelliferae, 215-232. Academic Press, New York, NY.
33. HIGGINS, D. G., A. J. BLEASBY, and R. FUCHS. 1992. CLUSTAL V: Improved software for multiple sequence alignment. Computer Applications in the Biosciences 8: 189-191.
34. HOLMGREN, P. K., N. H. HOLMGREN, and L. C. BARNETT. 1990. Index herbariorum. New York Botanical Garden, NY.
35. JURY, S. L. 1986. Fruit and leaf variation in the African species of the Umbelliferae tribe Caucalideae. Symbolae Botanicae Upsalienses 26: 181-188.
36. KATZ-DOWNIE, D. S., C. M. VALIEJO-ROMAN, E. I. TERENTIEVA, A. V. TROITSKY, M. G. PIMENOV, B.-Y. LEE, and S. R. DOWNIE. 1999. Towards a molecular phylogeny of Apiaceae subfamily Apioideae: additional information from nuclear ribosomal DNA ITS sequences. Plant Systematics and Evolution 216: 167-195.
37. KIMURA, M. 1980. A simple method for estimating evolutionary rates of base substitution through comparative studies of nucleotide sequences. Journal of Molecular Evolution 16: 111-120.
38. KLUGE, A. G. and J. S. FARRIS. 1969. Quantitative phyletics and the evolution of anurans. Systematic Zoology 18: 1-32.
39. KOSO-POLJANKSY, B. M. 1916. Sciadophytorum systematis lineamenta. Bulletin de la Société Impériale des Naturalistes (Moscow) 29: 93-222.
40. _. 1917. Sciadophytorum systematis lineamenta. Mantissa prior. Bulletin de la Société Impériale des Naturalistes (Moscow) 30: 277-290.
41. MADDISON, W. P. and D. R. MADDISON. 1992. MacClade, version 3.0: Analysis of phylogeny and character evolution. Sinauer, Sunderland, MA.
42. MCNEILL, J., P. F. PARKER, and V. H. HEYWOOD. 1969. A taximetric approach to the classification of the spiny-fruited members (tribe Caucalideae) of the flowering-plant family Umbelliferae. In A. J. Cole [ed.], Numerical taxonomy, 129-147. Academic Press, London, U. K.
43. OKEKE, S. E. 1982. Morphological variation of bracts, bracteoles and fruits in Daucus L. In A.-M. Cauwet-Marc and J. Carbonnier [eds.], Les Ombellifères. Actes du 2ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique," 161-174. Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. Braun-Brumfield, Ann Arbor, MI.
44. OLSEN, G. J., H. MATSUDA, R. HAGSTROM, and R. OVERBEEK. 1994. fastDNAml: a tool for construction of phylogenetic trees of DNA sequences using maximum likelihood. Computer Applications in the Biosciences 10: 41-48.
45. PIMENOV, M. G. and M. V. LEONOV. 1993. The genera of the Umbelliferae. Royal Botanic Gardens, Kew.
46. PLUNKETT, G. M. and S. R. DOWNIE. 1999. Major lineages within Apiaceae subfamily Apioideae: a comparison of chloroplast restriction site and DNA sequence data. American Journal of Botany 86: 1014-1026.
47. _, D. E. SOLTIS, and P. S. SOLTIS. 1996. Evolutionary patterns in Apiaceae: inferences based on matK sequence data. Systematic Botany 21: 477-495.
48. RECHINGER, K. H. 1987. Umbelliferae. In K. H. Rechinger [ed.], Flora Iranica 162: 1-555. Graz: Akademische Druck und Verlagsanstalt.
49. ème Symposium International sur les Ombellifères "Contributions Pluridisciplinaires à la Systématique," 175-193. Monographs in Systematic Botany from the Missouri Botanical Garden, vol. 6. Braun-Brumfield, Ann Arbor, MI.
50. SAITOU, N. and M. NEI. 1987. The neighbor-joining method: a new method for reconstructing evolutionary trees. Molecular Biology and Evolution 4: 406-425.
51. SWOFFORD, D. L. 1993. PAUP: phylogenetic analysis using parsimony, version 3.1. Computer program distributed by the Illinois Natural History Survey, Champaign, IL.
52. TAMAMSCHJAN, S. G. 1947. Carpological characterization of the genus Astrodaucus Drude and some Caucasian Caucalinae and Daucinae. Soviet Botany 4: 198-212.
53. TOWNSEND, C. C. 1964. Notes on the Umbelliferae of Iraq. I. Kew Bulletin 17: 427-439.
54. WHITE, T. J., T. BRUNS, S. LEE, and J. TAYLOR. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White [eds.], PCR protocols: a guide to methods and applications, 315-322. Academic Press, San Diego.
55. WILLIAMS, C. A. and J. B. HARBORNE. 1972. Essential oils in the spiny-fruited Umbelliferae. Phytochemistry 11: 1981-1987.