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Volumn 13, Issue 5, 2003, Pages 783-788

Genome diversification by phage-derived genomic islands in Pseudomonas aeruginosa

Author keywords

att site; Genome plasticity; Genomic island; Pf1 phage; Pseudomonas aeruginosa

Indexed keywords

BACTERIOPHAGE DNA; TRANSFER RNA;

EID: 0242551368     PISSN: 10177825     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article
Times cited : (7)

References (21)
  • 2
    • 0033214628 scopus 로고    scopus 로고
    • Heuristic approach to deriving models for gene finding
    • Besemer, J. and M. Borodovsky. 1999. Heuristic approach to deriving models for gene finding. Nucleic Acids Res. 27: 3911-3920.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 3911-3920
    • Besemer, J.1    Borodovsky, M.2
  • 3
    • 0027215943 scopus 로고
    • A simple and rapid method for the preparation of gram-negative bacterial genomic DNA
    • Chen, W. P. and T. T. Kuo. 1993. A simple and rapid method for the preparation of gram-negative bacterial genomic DNA. Nucleic Acids Res. 21: 2260.
    • (1993) Nucleic Acids Res. , vol.21 , pp. 2260
    • Chen, W.P.1    Kuo, T.T.2
  • 4
    • 0033971399 scopus 로고    scopus 로고
    • SigB, an RNA polymerase sigma factor required for osmoprotection and proper differentiation of Streptomyces coelicolor
    • Cho, Y.-H., E.-J. Lee, B.-E. Ahm, and J.-H. Roe. 2001. SigB, an RNA polymerase sigma factor required for osmoprotection and proper differentiation of Streptomyces coelicolor. Mol. Microbiol. 35: 150-160.
    • (2001) Mol. Microbiol. , vol.35 , pp. 150-160
    • Cho, Y.-H.1    Lee, E.-J.2    Ahm, B.-E.3    Roe, J.-H.4
  • 5
    • 0034980876 scopus 로고    scopus 로고
    • Ecological fitness, genomic islands and bacterial pathogenicity: A Darwinian view of the evolution of microbes
    • Hacker, J. and E. Carniel. 2001. Ecological fitness, genomic islands and bacterial pathogenicity: A Darwinian view of the evolution of microbes. EMBO Rep. 2: 376-381.
    • (2001) EMBO Rep. , vol.2 , pp. 376-381
    • Hacker, J.1    Carniel, E.2
  • 6
    • 0034130999 scopus 로고    scopus 로고
    • Filamentous bacteriophage for aligning RNA, DNA, and proteins for measurement of nuclear magnetic resonance dipolar coupling interactions
    • Hansen, M. R., P. Hanson, and A. Pardi. 2000. Filamentous bacteriophage for aligning RNA, DNA, and proteins for measurement of nuclear magnetic resonance dipolar coupling interactions. Methods Enzymol. 317: 220-240.
    • (2000) Methods Enzymol. , vol.317 , pp. 220-240
    • Hansen, M.R.1    Hanson, P.2    Pardi, A.3
  • 8
    • 0028168515 scopus 로고
    • spo0J is required for normal chromosome segregation as well as the initiation of sporulation in Bacillus subtilis
    • Ireton, K., N. W. Gunther, and A. D. Grossman. 1994. spo0J is required for normal chromosome segregation as well as the initiation of sporulation in Bacillus subtilis. J. Bacteriol. 176: 5320-5329.
    • (1994) J. Bacteriol. , vol.176 , pp. 5320-5329
    • Ireton, K.1    Gunther, N.W.2    Grossman, A.D.3
  • 9
    • 0036595304 scopus 로고    scopus 로고
    • Horizontal gene transfer in microbial genome evolution
    • Jain, R., M. C. Rivera, J. E. Moore, and J. A. Lake. 2002. Horizontal gene transfer in microbial genome evolution. Theor. Popul. Biol. 61: 489-495.
    • (2002) Theor. Popul. Biol. , vol.61 , pp. 489-495
    • Jain, R.1    Rivera, M.C.2    Moore, J.E.3    Lake, J.A.4
  • 10
    • 0035399931 scopus 로고    scopus 로고
    • Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes
    • Karlin, S. 2001. Detecting anomalous gene clusters and pathogenicity islands in diverse bacterial genomes. Trends Microbiol. 9: 335-343.
    • (2001) Trends Microbiol. , vol.9 , pp. 335-343
    • Karlin, S.1
  • 11
    • 0033816775 scopus 로고    scopus 로고
    • Predicted highly expressed genes of diverse prokaryotic genomes
    • Karlin, S. and J. Mrázek. 2000. Predicted highly expressed genes of diverse prokaryotic genomes. J. Bacteriol. 182: 5238-5250.
    • (2000) J. Bacteriol. , vol.182 , pp. 5238-5250
    • Karlin, S.1    Mrázek, J.2
  • 12
    • 0036129923 scopus 로고    scopus 로고
    • Pathogenicity islands and PAI-like structures in Pseudomonas species
    • Larbig, K., C. Kiewitz, and B. Tümmler. 2002. Pathogenicity islands and PAI-like structures in Pseudomonas species. Curr. Top. Microbiol. Immunol. 264: 201-211.
    • (2002) Curr. Top. Microbiol. Immunol. , vol.264 , pp. 201-211
    • Larbig, K.1    Kiewitz, C.2    Tümmler, B.3
  • 13
    • 6644225559 scopus 로고    scopus 로고
    • Enumeration of Vibrio vulnificus in natural samples by colony blot hybridization
    • Lee, J. H., K.-H. Lee, and S. H. Choi. 2001. Enumeration of Vibrio vulnificus in natural samples by colony blot hybridization. J. Microbiol. Biotechnol. 11: 302-309.
    • (2001) J. Microbiol. Biotechnol. , vol.11 , pp. 302-309
    • Lee, J.H.1    Lee, K.-H.2    Choi, S.H.3
  • 14
    • 0037003007 scopus 로고    scopus 로고
    • Development of rapid molecular detection marker for Colletotrichum spp. in leaf and fruit tissues of sweet persimmon
    • Lee, S.-P. and Y-S. Lee. 2002. Development of rapid molecular detection marker for Colletotrichum spp. in leaf and fruit tissues of sweet persimmon. J. Microbiol. Biotechnol. 12: 989-992.
    • (2002) J. Microbiol. Biotechnol. , vol.12 , pp. 989-992
    • Lee, S.-P.1    Lee, Y-S.2
  • 15
    • 0030854739 scopus 로고    scopus 로고
    • tRNA scan-SE: A program for improved detection of transfer RNA genes in genomic sequence
    • Lowe, T. M. and S. R. Eddy. 1997. tRNA scan-SE: A program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25: 955-964.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 955-964
    • Lowe, T.M.1    Eddy, S.R.2
  • 16
    • 0034682335 scopus 로고    scopus 로고
    • Lateral gene transfer and the nature of bacterial innovation
    • Ochman, H., J. G. Lawrence, and E. A. Groisman. 2000. Lateral gene transfer and the nature of bacterial innovation. Nature 405: 299-304.
    • (2000) Nature , vol.405 , pp. 299-304
    • Ochman, H.1    Lawrence, J.G.2    Groisman, E.A.3
  • 17
    • 0029035765 scopus 로고
    • Common virulence factors for bacterial pathogenicity in plants and animals
    • Rahme, L. G., E. J. Stevens, S. F. Wolfort, J. Shao, R. G. Tompkins, and F. M. Ausubel. 1995. Common virulence factors for bacterial pathogenicity in plants and animals. Science 268: 1899-1902.
    • (1995) Science , vol.268 , pp. 1899-1902
    • Rahme, L.G.1    Stevens, E.J.2    Wolfort, S.F.3    Shao, J.4    Tompkins, R.G.5    Ausubel, F.M.6
  • 19
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice
    • Thompson, J. D., D. G. Higgins, and T. J. Gibson. 1994. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, positions-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
    • (1994) Nucleic Acids Res. , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.