Development of rapid molecular detection marker for Colletotrichum spp. in leaf and fruit tissues of sweet persimmon

Journal of Microbiology and Biotechnology

Volumn 12, Issue 6, 2002, Pages 989-992

  Lee, Sang Pyo ^a   Lee, Youn Su ^a  

^a Kangwon National University   (South Korea)

Author keywords

Anthracnose; Colletotrichum spp.; ITS region; Molecular detection; rDNA; Sweet persimmon

Indexed keywords

INTERNAL TRANSCRIBED SPACER; PRIMER DNA; RIBOSOME DNA;

ANTHRACNOSE; ARTICLE; BACTERIUM ISOLATE; COLLETOTRICHUM; CONTROLLED STUDY; DNA SEQUENCE; DNA TEMPLATE; FRUIT; FUNGAL DETECTION; FUNGUS ISOLATION; NONHUMAN; PERSIMMON; PLANT DISEASE; PLANT LEAF; POLYMERASE CHAIN REACTION; SPECIES CULTIVATION; SPECIES DIFFERENCE; TEMPERATURE;

BACTERIA (MICROORGANISMS); COLLETOTRICHUM; DIOSPYROS; DIOSPYROS KAKI; DIOSPYROS VIRGINIANA; FUNGI; MYXOGASTRIA;

EID: 0037003007     PISSN: 10177825     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (25)

1. Agrios, G. N. 1998. Plant Pathology. Academic Press, pp. 331-333.
2. Agostini, J. P., L. W. Timmer, and D. J. Mitchell. 1992. Morphological and pathological characteristics of strains of Colletotrichum gloeosporioides from citrus. Phytopathology 82: 1377-1382.
3. Breithwaite, K. S., J. A. G. Irwin, and J. M. Manners. 1990. Restriction fragment length polymorphism in Colletotrichum gloeosporioides infecting Stylosanthes spp. in Austria. Mycol. Res. 94: 1129-1137.
4. Goodwin, S. B., A. Drenth, and W. E. Fry. 1992. Cloning and genetic analysis of two highly polymorphic moderately repetitive nuclear DNAs from Phytophthora infestans. Curr. Genet. 22: 107-155.
5. Gunnell, P. S. and W. D. Gubler. 1992. Taxonomy and morphology of Colletotrichum species pathogenic to strawberry. Mycologia 84: 157-165.
6. Innis, M. A. and D. H. Gelfand. 1990. Optimization of PCRs, pp. 3-12. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (eds.), PCR Protocols. A guide to methods and applications. Academic Press, Inc., Harcourt Brace Jovanovich, New York, U.S.A.
7. Kim, K. S. and Y. S. Lee. 2000. Rapid and accurate species-specific detection of Phytophthora infestans through analysis of ITS regions in its rDNA. J. Microbiol. Biotechnol. 10: 651-655.
8. Kim, T.-W., S.-G. Min, D.-H. Choi, J.-S. Jo, and H.-Y. Kim. 2000. Rapid identification of Lactobacillus plantarum in Kimchi using polymerase chain reaction. J. Microbiol. Biotechnol. 10: 881-884.
9. Kim, W. J., S. Y. Shin, and H. J. Hwang. 2001. Inhibitory effects of acetic acid and temperature on growth of Campylobacter jejuni ATCC 33291. J. Microbiol. Biotechnol. 11: 934-949.
10. Kwak B.-Y., D.-H. Shon, B.-J. Kwon, C.-H. Kweon, and K.-H. Lee. 2001. Detection of Aspergillus and Penicillium genera by enzyme-linked immunosorbent assay using a monoclonal antibody. J. Microbiol. Biotechnol. 11: 21-28.
11. Lee, H. Y., W. Y. Choi, K. S. Cho, and W. J. Choi. 2001. 16S/23S intergenic spacer region as a genetic marker for Thiobacillus thiooxidans and T. ferrooxidans. J. Microbiol. Biotechnol. 11: 1046-1054.
12. Mesquita, A. G. G., T. J. Paula, M. A. Moreira Jr., and E. G. de Barros. 1998. Identification of races of Colletotrichum lindemuthianum with the aid of PCR-based molecular markers. Plant Disease 82: 1084-1087.
13. Rhee, S.-K., S.-P. Hong, J.-W. Bae, C. O. Jeon, S.-G. Lee, J. J. Song, H. Poo, and M.-H. Sung. 2001. Estimation of distribution of a commensal thermophile in soil by competitive PCR and terminal restriction fragment length polymorphism analysis. J. Microbiol. Biotechnol. 11: 940-945.
14. Sherriff, C., M. J. Whelan, G. M. Arnold, J. M. Lafay, J. Brygoo, and J. A. Bailey. 1994. Ribosomal new species grouping in the genus Colletotrichum. Exp. Mycol. 18: 121-138.
15. Sherriff, C., M. J. Whelan, G. M. Arnold, and J. A. Bailey. 1995. rDNA sequence analysis confirms the distinction between Colletotrichum graminicola and C. sublineolum. Mycological Research 99: 475-478.
16. Shin, S. S., J. H. Park, and W. J. Kim. 1999. Specific detection of enteropathogen Campylobacter jejuni in food using a polymerase chain reaction. J. Microbiol. Biotechnol. 9: 184-190.
17. Sreenivasaparasad, S., P. R. Mills, B. M. Meehan, and A. E. Brown 1996. Phylogeny and systematics of 18 Colletotrichum species based on ribosomal DNA spacer sequences. Genome 39: 499-512.
18. Sreenivasaprasad, S., A. E. Brown, and P. R. Mills. 1992. DNA sequence variation and interrelationships among Colletotrichum species causing strawberry anthracnose. Physiol. Mol. Plant Pathol. 41: 265-281.
19. Vaillancourt, L. J. and R. M. Hanau. 1992. Genetic and morphological comparisons of Glomerella (Colletotrichum) isolates from maize and from sorghum. Exp. Mycol. 16: 219-229.
20. Verbeet, M. P., J. Klootwijk, H. Herrikhuizen, R. Fontijn, E. Vrengdenhil, and R. J. Planta. 1983. Molecular cloning of the rDNA of Saccharomyces rosei and comparison of its transcription initiation region with that of Saccharomyces carlsbergensis. Gene 23: 53-63.
21. Vilarinhos, A. D., T. T. Paula Jr., E. G. Barros, and M. A. Moreia. 1995. Characterization of races of Colletotrichum lindermuthianum by the random amplified polymorphic DNA technique. Braz. Phytopathol. 20: 194-198.
22. Wang, H., M. Qi, and A. J. Cutler. 1993. A simple method of preparing plant samples for PCR. Nucleic Acids Res. 21: 4153-4154.
23. White, T. J., T. Burns, S. Lee, and J. Taylor. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics, pp. 315-322. In M. A. Innis, D. H. Gelfand, J. J. Sninsky, and T. J. White (eds.), PCR Protocols, Academic Press. San Diego, CA, U.S.A.
24. Williams, J. G. K., A. R. Kubelik, K. J. Livak, J. A. Rafalski, and S. V. Tingey. 1990. DNA polymorphisms amplified by arbitrary primers are useful as genetic markers. Nucleic Acids Res. 18: 6531-6535.
25. Youn, C. S., G. H. Sung, J. H. Sung, and J. O. Lee. 1999. A molecular marker specific to Metarhizium anisophiae var. majus. J. Microbiol. Biotechnol. 9: 334-339.