Filamentous bacteriophage for aligning RNA, DNA, and proteins for measurement of nuclear magnetic resonance dipolar coupling interactions

Methods in Enzymology

Volumn 317, Issue , 2000, Pages 220-240

  Hansen, Mark R ^a   Hanson, Paul ^a   Pardi, Arthur ^a  

^a NONE

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL DNA; BACTERIAL PROTEIN; BACTERIAL RNA;

ARTICLE; BACTERIOPHAGE; DNA DETERMINATION; MACROMOLECULE; MOLECULAR INTERACTION; NONHUMAN; NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY; NUCLEAR OVERHAUSER EFFECT; PRIORITY JOURNAL; PROTEIN ANALYSIS; RNA ANALYSIS; RNA SEQUENCE; RNA STRUCTURE; SIGNAL NOISE RATIO; STRUCTURE ANALYSIS;

BACTERIA (MICROORGANISMS); FILAMENTOUS BACTERIOPHAGE;

EID: 0034130999     PISSN: 00766879     EISSN: None     Source Type: Book Series    
DOI: 10.1016/s0076-6879(00)17017-x     Document Type: Article

References (38)

1. A. Pardi, Methods Enzymol. 261, 350 (1995).
2. G. Varani, F. Aboul-ela, and F. H. T. Allain, Prog. Nucl. Magn. Reson. Spectrosc. 29, 51 (1996).
3. N. Tjandra and A. Bax, Science 278, 1111 (1997).
4. A. Bax and N. Tjandra, J. Biomol. NMR 10, 289 (1997).
5. J. H. Prestegard, Nature Struct. Biol. 5 Suppl., 517 (1998).
6. M. R. Hansen, L. Mueller, and A. Pardi, Nature Struct. Biol. 5, 1065 (1998).
7. A. A. Bothner-By, in "Encyclopedia of Nuclear Magnetic Resonance" (D. M. Grant and R. K. Harris, eds.), pp. 2932. John Wiley & Sons, Chichester, U.K., 1995.
8. H. C. Kung, K. Y. Wang, I. Goljer, and P. H. Bolton, J. Magn. Reson. B 109, 323 (1995).
9. J. R. Tolman, J. M. Flanagan, M. A. Kennedy, and J. H. Prestegard, Proc. Natl. Acad. Sci. U.S.A. 92, 9279 (1995).
10. J. R. Tolman, J. M. Flanagan, M. A. Kennedy, and J. H. Prestegard, Nature Struct. Biol. 4, 292 (1997).
11. R. D. Beger, V. M. Marathias, B. F. Volkman, and P. H. Bolton, J. Magn. Reson. 135, 256 (1998).
12. C. R. Sanders and J. P. Schwonek, Biochemistry 31, 8898 (1992).
13. M. R. Hansen, M. Rance, and A. Pardi, J. Am. Chem. Soc. 120, 11210 (1998).
14. G. M. Clore, M. R. Starich, and A. M. Gronenborn, J. Am. Chem. Soc. 120, 10571 (1998).
15. J. Torbet and G. Maret, J. Mol. Biol. 134, 843 (1979).
16. J. Torbet and G. Maret, Biopolymers 20, 2657 (1981).
17. K. Zimmermann, H. Hagedorn, C. C. Heuck, M. Hinrichsen, and H. Ludwig, J. Biol. Chem. 261, 1653 (1986).
18. D. F. Hill, N. J. Short, R. N. Perham, and G. B. Petersen, J. Mol. Biol. 218, 349 (1991).
19. R. Nambudripad, W. Stark, and L. Makowski, J. Mol. Biol. 220, 359 (1991).
20. P. Model and M. Russel, in, "The Bacteriophages" (R. Calendar, ed.), p. 375. Plenum Press, New York, 1988.
21. D. A. Marvin, Curr. Opin. Struct. Biol. 8, 150 (1998).
22. P. Tsang and S. J. Opella, Biopolymers 25, 1859 (1986).
23. K. Takeya and K. Amako, Virology 28, 163 (1966).
24. D. E. Bradley, Can. J. Microbiol. 19, 623 (1973).
25. T. A. Cross and S. J. Opella, Biochemistry 20, 290 (1981).
26. T. A. Cross, P. Tsang, and S. J. Opella, Biochemistry 22, 721 (1983).
27. K. Horiuchi, J. Mol. Biol. 169, 389 (1983).
28. J. Sambrook, E. Fritsch, and T. Maniatis, "Molecular Cloning, A Laboratory Manual," 2nd Ed., pp. 2.73. Cold Spring Harbor Laboratory Press, Plainview, New York, 1989.
29. L. G. Kostrikis, D. J. Liu, and L. A. Day, Biochemistry 33, 1694 (1994).
30. L. Specthrie, E. Bullitt, K. Horiuchi, P. Model, M. Russel, and L. Makowski, J. Mol. Biol. 228, 720 (1992).
31. N. Tjandra, J. G. Omichinski, A. M. Gronenborn, G. M. Clore, and A. Bax, Nature Struct. Biol. 4, 732 (1997).
32. K. J. Addess, J. P. Basilion, R. D. Klausner, T. A. Rouault, and A. Pardi, J. Mol. Biol. 274, 72 (1997).
33. P. J. Bolon and J. H. Prestegard, J. Am. Chem. Soc. 120, 9366 (1998).
34. M. Piotto, V. Saudek, and V. Sklenár, J. Biomol. NMR 2, 661 (1992).
35. S. Grzesiek and A. Bax, J. Am. Chem. Soc. 115, 12593 (1993).
36. J. Santoro and G. C. King, J. Magn. Reson. 97, 202 (1992).
37. G. W. Vuister and A. Bax, J. Magn. Reson. 98, 428 (1992).
38. D. Marion, M. Ikura, R. Tschudin, and A. Bax, J. Magn. Reson. 85, 393 (1989).