Monitoring of white-rot fungus during bioremediation of polychlorinated dioxin-contaminated fly ash

Applied Microbiology and Biotechnology

Volumn 62, Issue 5-6, 2003, Pages 601-607

  Suhara, H ^a   Daikoku, C ^a   Takata, H ^b   Suzuki, S ^c   Matsufuji, Y ^c   Sakai, K ^a   Kondo, R ^a  

^a KYUSHU UNIVERSITY   (Japan)

^b NATIONAL CENTER FOR GERIATRICS AND GERONTOLOGY   (Japan)

^c FUKUOKA UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

CHLORINE DERIVATIVE; DIOXIN; INTERNAL TRANSCRIBED SPACER; INTERNAL TRANSCRIBED SPACER 1; INTERNAL TRANSCRIBED SPACER 2; RIBOSOME DNA;

BIOREMEDIATION; DIOXIN; FLY ASH; FUNGUS; INTRODUCED SPECIES; MONITORING; POLYMERASE CHAIN REACTION; SOIL REMEDIATION;

ARTICLE; BIOREMEDIATION; BIOSAFETY; CONTROLLED STUDY; DNA ISOLATION; ECOSYSTEM; FLY ASH; GENE AMPLIFICATION; ISOLATION PROCEDURE; JAPAN; MONITORING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHANEROCHAETE; POLYMERASE CHAIN REACTION; RELIABILITY; SOIL POLLUTION;

AIR POLLUTANTS; BENZOFURANS; BIODEGRADATION, ENVIRONMENTAL; CARBON; DIOXINS; DNA, FUNGAL; DNA, RIBOSOMAL SPACER; PARTICULATE MATTER; POLYMERASE CHAIN REACTION; POLYPORALES; SENSITIVITY AND SPECIFICITY;

CERIPORIA; FRAXINUS; FUNGI; PHANEROCHAETE;

EID: 0242407521     PISSN: 01757598     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00253-003-1284-9     Document Type: Article

References (19)

1. Aust SD, Stahl JD (1998) Biodegradation of dioxin and dioxin-like compounds by white-rot fungi. In: Wittich RM (eds) Biodegradation of dioxins and furans. Springer, Berlin Heidelberg New York
2. Bumpus JA, Tien M, Wright DS (1985) Oxidation of persistent environmental pollutants by a white rot fungus. Science 228:1434-1436
3. Gardes M, Bruns TD (1993) ITS primers with enhanced specificity for basidiomycetous - application to the identification of mycorrhizae and rusts. Mol Ecol 2:113-118
4. Glen M, Tommerup IC, Rougher NL, O'brien PL (2001) Specificity, sensitivity and discrimination of primers for PCR-RFLP of larger basidiomycetes and their applicability to identification of ectomycorrhizal fungi in Eucalyptus forests and plantations. Mycol Res 105:138-149
5. Kelly AG, Bainbridge BW, Heale JB, Peréz-Artes E, Jiménez-Diaz RM (1998) In planta-polymerase-chain-reaction detection of the wilt-inducing pathotype of Fusarium oxyspolum f.sp. ciceris in chickpea (Cocerarietimum L.). Physiol Mol Plant Pathol 52:397-409
6. Lee SB, White TJ, Taylor JW (1993) Detection of Phytophthora species by oligonucleotide hybridization to amplified ribosomal DNA spacers. Phytopathology 83:177-181
7. Lovic BR, Martyn RD, Miller ME (1995) Sequence analysis of the ITS regions of rDNA in Monosporascus spp. to evaluate its potential for PCR-mediate detection. Phytopathology 85:655-661
8. Mazzaglia A, Anselmi N, Gasbarri A, Vannini A (2001) Development of a polymerase chain reaction (PCR) assay for the specific detection of Biscogniauxia mediterranea living as an endophyte in oak tissues. Mycol Res 105:952-956
9. Mesarch MB, Nakatsu CH, Nies L (2000) Development of catechol 2,3-dioxigenase-specific primers for monitoring bioremediation by competitive quantitative PCR. Appl Environ Microbiol 66:678-683
10. Mori T, Kondo R (2002) Degradation of 2,7-dichlorodibenzo-p-dioxin by wood-rotting fungi, screened by dioxin degrading ability. FEMS Microb Lett 213:127-131
11. Nicolson P, Simpson DR, Weston G, Rezanoor HN, Lees AK, Parry DW, Joyce D (1998) Detection and quantification of Fusarium culmorum and Fusarium graminearum in celeas using PCR assays. Physiol Mol Plant Pathol 53:17-37
12. Rigotti S, Gindro K, Richter H, Viret O (2002) Characterization of molecular markers for specific and sensitive detection of Botrytis cinerea Pers.: Fr. in strawberry (Fragaria xananassa Duch.) using PCR. FEMS Microbiol lett 209:169-174
13. Sarkanen KV, Ludwig CH (1971) Lignins: occurrence, formation, structure, and reactions. Wiley, New York
14. Schilling AG, Möller ME, Geiger HH (1996) Polymerase chain reaction-based assay for species-specific detection of Fusarium culumorum, F. gramineatum and F. avenaceum. Phytopathology 86:515-522
15. Schimidt O, Moreth U (2000) Species-specific PCR primers in the rDNA-ITS region as a diagnostic tool for Serpula lacrimans and Serpula himantioides. Mycol Res 14:69-72
16. Suzuki S, Yanase R, Matsufuji Y, Kondo R (2002) Behavior and possibility of biodegradation of PCDDs/PCDFs in landfill site. Proceedings of the 2nd Asian Pacific Landfill Symposium, Korea Society of Waste Management. pp 398-406
17. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX Windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 24:4876-4882
18. Trout CL, Ristaino JB, Madtrich M, Wangsomboondee T (1997) Rapid detection of Phytophthora infestans in late blight-infected potato and tomato using PCR. Plant Dis 81:1042-1048
19. White TJ, Bruns T, Lee S, Taylor J (1990) Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sinsky JJ, White TJ (eds) PCR protocols. A guide to methods and applications. Academic Press, San Diego