-
2
-
-
0025881012
-
Strand-specific nucleotide composition bias in echinoderm and vertebrate mitochondrial genomes
-
ASAKAWA, S., Y. KUMAZAWA, T. ARAKI, H. HIMENO, K. MIURA et al., 1991 Strand-specific nucleotide composition bias in echinoderm and vertebrate mitochondrial genomes. J. Mol. Evol. 32: 511-520.
-
(1991)
J. Mol. Evol.
, vol.32
, pp. 511-520
-
-
Asakawa, S.1
Kumazawa, Y.2
Araki, T.3
Himeno, H.4
Miura, K.5
-
3
-
-
0036671452
-
Mutation patterns of mitochondrial H- and L-strand DNA in closely related Cyprinid fishes
-
BIELAWSKI, J. P., and J. R. GOLD, 2002 Mutation patterns of mitochondrial H- and L-strand DNA in closely related Cyprinid fishes. Genetics 161: 1589-1597.
-
(2002)
Genetics
, vol.161
, pp. 1589-1597
-
-
Bielawski, J.P.1
Gold, J.R.2
-
4
-
-
0033646639
-
Transcription and replication of mitochondrial DNA
-
CLAYTON, D. A., 2000 Transcription and replication of mitochondrial DNA. Hum. Reprod. 15: 11-17.
-
(2000)
Hum. Reprod.
, vol.15
, pp. 11-17
-
-
Clayton, D.A.1
-
5
-
-
0026005173
-
Codon usage is imposed by the gene location in the transcription unit
-
DELORME, M. O., and A. HENAUT, 1991 Codon usage is imposed by the gene location in the transcription unit. Curr. Genet. 20: 353-358.
-
(1991)
Curr. Genet.
, vol.20
, pp. 353-358
-
-
Delorme, M.O.1
Henaut, A.2
-
6
-
-
0030976320
-
Strand asymmetries in DNA evolution
-
FRANCINO, M. P., and H. OCHMAN, 1997 Strand asymmetries in DNA evolution. Trends Genet. 13: 240-245.
-
(1997)
Trends Genet.
, vol.13
, pp. 240-245
-
-
Francino, M.P.1
Ochman, H.2
-
7
-
-
0025344222
-
A sensitive genetic assay for the detection of cytosine deamination: Determination of rate constants and the activation energy
-
FREDERICO, L. A., T. A. KUNKEL and B. R. SHAW, 1990 A sensitive genetic assay for the detection of cytosine deamination: determination of rate constants and the activation energy. Biochemistry 29: 2532-2537.
-
(1990)
Biochemistry
, vol.29
, pp. 2532-2537
-
-
Frederico, L.A.1
Kunkel, T.A.2
Shaw, B.R.3
-
8
-
-
0033918896
-
Lineage-specific evolutionary rate in mammalian mtDNA
-
GISSI, C., A. REYES, C. PESOLE and C. SACCONE, 2000 Lineage-specific evolutionary rate in mammalian mtDNA. Mol. Biol. Evol. 17: 1022-1031.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1022-1031
-
-
Gissi, C.1
Reyes, A.2
Pesole, C.3
Saccone, C.4
-
9
-
-
0022376704
-
Dating of the human-ape splitting by a molecular clock of mitochondrial DNA
-
HASEGAWA, M., H. KISHINO and T. YANO, 1985 Dating of the human-ape splitting by a molecular clock of mitochondrial DNA. J. Mol. Evol. 22: 160-174.
-
(1985)
J. Mol. Evol.
, vol.22
, pp. 160-174
-
-
Hasegawa, M.1
Kishino, H.2
Yano, T.3
-
10
-
-
0034598918
-
Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA
-
HOLT, I. J., H. E. LORIMER and H. T. JACOBS, 2000 Coupled leading- and lagging-strand synthesis of mammalian mitochondrial DNA. Cell 100: 515-524.
-
(2000)
Cell
, vol.100
, pp. 515-524
-
-
Holt, I.J.1
Lorimer, H.E.2
Jacobs, H.T.3
-
11
-
-
0025790276
-
The spectrum of spontaneous mutations in a Saccharomyces cerevisiae uracil-DNA-glycosylase mutant limits the function of this enzyme to cytosine deamination repair
-
IMPELLIZZERI, K. J., B. ANDERSON and P. M. BURGERS, 1991 The spectrum of spontaneous mutations in a Saccharomyces cerevisiae uracil-DNA-glycosylase mutant limits the function of this enzyme to cytosine deamination repair. J. Bacteriol. 173: 6807-6810.
-
(1991)
J. Bacteriol.
, vol.173
, pp. 6807-6810
-
-
Impellizzeri, K.J.1
Anderson, B.2
Burgers, P.M.3
-
12
-
-
0028308288
-
Analysis of directional mutation pressure and nucleotide content in mitochondrial cytochrome b genes
-
JERMIIN, L. S., D. GRAUR, R. M. LOWE and R. H. CROZIER, 1994 Analysis of directional mutation pressure and nucleotide content in mitochondrial cytochrome b genes. J. Mol. Evol. 39: 160-173.
-
(1994)
J. Mol. Evol.
, vol.39
, pp. 160-173
-
-
Jermiin, L.S.1
Graur, D.2
Lowe, R.M.3
Crozier, R.H.4
-
13
-
-
0029000323
-
Evidence from analyses of intergenic regions for strand-specific directional mutation pressure in metazoan mitochondrial DNA
-
JERMIIN, L. S., D. GRAUR and R. H. CROZIER, 1995 Evidence from analyses of intergenic regions for strand-specific directional mutation pressure in metazoan mitochondrial DNA. Mol. Biol. Evol. 12: 558-563.
-
(1995)
Mol. Biol. Evol.
, vol.12
, pp. 558-563
-
-
Jermiin, L.S.1
Graur, D.2
Crozier, R.H.3
-
14
-
-
0021277009
-
A new method for calculating evolutionary substitution rates
-
LANAVE, C., G. PREPARATA, C. SACCONE and C. SERIO, 1984 A new method for calculating evolutionary substitution rates. J. Mol. Evol. 20: 86-93.
-
(1984)
J. Mol. Evol.
, vol.20
, pp. 86-93
-
-
Lanave, C.1
Preparata, G.2
Saccone, C.3
Serio, C.4
-
15
-
-
0021665968
-
Demonstration of a sudden change in the use of codons in the vicinity of transcription termination
-
LIMAIEM, J., and A. HENAUT, 1984a Demonstration of a sudden change in the use of codons in the vicinity of transcription termination. Crit. Rev. Acad. Sci. III 299: 275-280.
-
(1984)
Crit. Rev. Acad. Sci. III
, vol.299
, pp. 275-280
-
-
Limaiem, J.1
Henaut, A.2
-
16
-
-
0021368739
-
Fluctuation of the incidence of the 4 bases along the mitochondrial genome of mammals using correspondence factorial analysis
-
LIMAIEM, J., and A. HENAUT, 1984b Fluctuation of the incidence of the 4 bases along the mitochondrial genome of mammals using correspondence factorial analysis. Crit. Rev. Acad. Sci. III 298: 279-286.
-
(1984)
Crit. Rev. Acad. Sci. III
, vol.298
, pp. 279-286
-
-
Limaiem, J.1
Henaut, A.2
-
17
-
-
0027278557
-
Instability and decay of the primary structure of DNA
-
LINDAHL, T., 1993 Instability and decay of the primary structure of DNA. Nature 362: 709-715.
-
(1993)
Nature
, vol.362
, pp. 709-715
-
-
Lindahl, T.1
-
18
-
-
0024541837
-
Mitochondrial DNA mutations as an important contributor to ageing and degenerative diseases
-
LINNANE, A. W., S. MARZUKI, T. OZAWA and M. TANAKA, 1989 Mitochondrial DNA mutations as an important contributor to ageing and degenerative diseases. Lancet 1: 642-645.
-
(1989)
Lancet
, vol.1
, pp. 642-645
-
-
Linnane, A.W.1
Marzuki, S.2
Ozawa, T.3
Tanaka, M.4
-
19
-
-
0029985398
-
Asymmetric substitution patterns in the two DNA strands of bacteria
-
LOBRY, J. R., 1996 Asymmetric substitution patterns in the two DNA strands of bacteria. Mol. Biol. Evol. 13: 660-665.
-
(1996)
Mol. Biol. Evol.
, vol.13
, pp. 660-665
-
-
Lobry, J.R.1
-
20
-
-
0029049426
-
Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes
-
PERNA, N. T., and T. D. KOCHER, 1995 Patterns of nucleotide composition at fourfold degenerate sites of animal mitochondrial genomes. J. Mol. Evol. 41: 353-358.
-
(1995)
J. Mol. Evol.
, vol.41
, pp. 353-358
-
-
Perna, N.T.1
Kocher, T.D.2
-
21
-
-
0033635920
-
Assessing an unknown evolutionary process: Effect of increasing site-specific knowledge through taxon addition
-
POLLOCK, D. D., and W. J. BRUNO, 2000 Assessing an unknown evolutionary process: effect of increasing site-specific knowledge through taxon addition. Mol. Biol. Evol. 17: 1854-1858.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1854-1858
-
-
Pollock, D.D.1
Bruno, W.J.2
-
22
-
-
0033639232
-
A case for evolutionary genomics and the comprehensive examination of sequence biodiversity
-
POLLOCK, D. D., J. A. EISEN, N. A. DOGGETT and M. P. CUMMINGS, 2000 A case for evolutionary genomics and the comprehensive examination of sequence biodiversity. Mol. Biol. Evol. 17: 1776-1788.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1776-1788
-
-
Pollock, D.D.1
Eisen, J.A.2
Doggett, N.A.3
Cummings, M.P.4
-
23
-
-
0033967692
-
Introducing RefSeq and LocusLink: Curated human genome resources at the NCBI
-
PRUITT, K. D., K. S. KATZ, H. SICOTTE and D. R. MAGLOTT, 2000 Introducing RefSeq and LocusLink: curated human genome resources at the NCBI. Trends Genet. 16: 44-47.
-
(2000)
Trends Genet.
, vol.16
, pp. 44-47
-
-
Pruitt, K.D.1
Katz, K.S.2
Sicotte, H.3
Maglott, D.R.4
-
24
-
-
0031950474
-
Asymmetrical directional mutation pressure in the mitochondrial genome of mammals
-
REYES, A., C. GISSI, G. PESOLE and C. SACCONE, 1998 Asymmetrical directional mutation pressure in the mitochondrial genome of mammals. Mol. Biol. Evol. 15: 957-966.
-
(1998)
Mol. Biol. Evol.
, vol.15
, pp. 957-966
-
-
Reyes, A.1
Gissi, C.2
Pesole, G.3
Saccone, C.4
-
26
-
-
0030920779
-
Mitochondrial DNA maintenance in vertebrates
-
SHADEL, G. S., and D. A. CLAYTON, 1997 Mitochondrial DNA maintenance in vertebrates. Annu. Rev. Biochem. 66: 409-435.
-
(1997)
Annu. Rev. Biochem.
, vol.66
, pp. 409-435
-
-
Shadel, G.S.1
Clayton, D.A.2
-
27
-
-
3643052747
-
On the genetic basis of variation and heterogeneity of DNA base composition
-
SUEOKA, N., 1962 On the genetic basis of variation and heterogeneity of DNA base composition, Proc. Natl. Acad. Sci. USA 48: 582-592.
-
(1962)
Proc. Natl. Acad. Sci. USA
, vol.48
, pp. 582-592
-
-
Sueoka, N.1
-
28
-
-
0029880314
-
The effect of topology on estimates of among-site rate variation
-
SULLIVAN, J., K. E. HOLSINGER and C. SIMON, 1996 The effect of topology on estimates of among-site rate variation. J. Mol. Evol. 42: 308-312.
-
(1996)
J. Mol. Evol.
, vol.42
, pp. 308-312
-
-
Sullivan, J.1
Holsinger, K.E.2
Simon, C.3
-
30
-
-
0027966917
-
Strand asymmetry in human mitochondrial DNA mutations
-
TANAKA, M., and T. OZAWA, 1994 Strand asymmetry in human mitochondrial DNA mutations. Genomics 22: 327-335.
-
(1994)
Genomics
, vol.22
, pp. 327-335
-
-
Tanaka, M.1
Ozawa, T.2
-
31
-
-
0027968068
-
CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice
-
THOMPSON, J. D., D. G. HIGGINS and T. J. GIBSON, 1994 CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res. 22: 4673-4680.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 4673-4680
-
-
Thompson, J.D.1
Higgins, D.G.2
Gibson, T.J.3
-
32
-
-
0033525773
-
Mitochondrial diseases in man and mouse
-
WALLACE, D. C., 1999 Mitochondrial diseases in man and mouse. Science 283: 1482-1488.
-
(1999)
Science
, vol.283
, pp. 1482-1488
-
-
Wallace, D.C.1
-
33
-
-
0027083319
-
Animal mitochondrial DNA: Structure and evolution
-
WOLSTENHOLME, D. R., 1992 Animal mitochondrial DNA: structure and evolution. Int. Rev. Cytol. 141: 173-216.
-
(1992)
Int. Rev. Cytol.
, vol.141
, pp. 173-216
-
-
Wolstenholme, D.R.1
-
34
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
YANG, Z., 1997 PAML: a program package for phylogenetic analysis by maximum likelihood. Comput. Appl. Biosci. 13: 555-556.
-
(1997)
Comput. Appl. Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
35
-
-
0028267146
-
Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation
-
YANG, Z., N. GOLDMAN and A. FRIDAY, 1994 Comparison of models for nucleotide substitution used in maximum-likelihood phylogenetic estimation. Mol. Biol. Evol. 11: 316-324.
-
(1994)
Mol. Biol. Evol.
, vol.11
, pp. 316-324
-
-
Yang, Z.1
Goldman, N.2
Friday, A.3
|