Isolation of a Gene Encoding a Copper Chaperone for the Copper/Zinc Superoxide Dismutase and Characterization of Its Promoter in Potato

Plant Physiology

Volumn 133, Issue 2, 2003, Pages 618-629

  Trindade, Luisa M ^a   Horvath, Beatrix M ^a   Bergervoet, Marjan J E ^a   Visser, Richard G F ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

ENZYMES; FRUCTOSE; GLUCOSE; HORMONES; PLANTS (BOTANY);

GENE ENCODING;

GENES;

EMBRYOPHYTA; SOLANUM TUBEROSUM; TUBEROSUM;

EID: 0142152464     PISSN: 00320889     EISSN: None     Source Type: Journal    
DOI: 10.1104/pp.103.025320     Document Type: Article

References (71)

1. Abe H, Yamaguchi-shinozaki K, Urao T, Iwasaki T, Hosokawa D, Shinozaki K (1997) Role of Arabidopsis MYC and MYB homologs in drought- and abscisic acid-regulated gene expression. Plant Cell 9: 1859-1868
2. Allen RD, Webb RP, Schake SA (1997) Use of transgenic plants to study antioxidant defenses. Free Radic Biol Med 23: 473-479
3. Altschul SF, Madden TL, Schaffer AA, Zhang JH, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res 25: 3389-3402
4. Asada K (1992) Ascorbate peroxidase: a hydrogen peroxide-scavenging enzyme in plants. Physiol Plant 85: 235-241
5. Bachem C, van der Hoeven R, Lucker J, Oomen R, Casarini E, Jacobsen E, Visser R (2000) Functional genomic analysis of potato tuber life-cycle. Potato Res 43: 297-312
6. Bachem CWB, Oomen RJFJ, Visser RGF (1998) Transcript imaging with cDNA-AFLP: a step-by-step protocol. Plant Mol Biol Rep 16: 157-173
7. Bachem CWB, van der Hoeven RS, de Bruijn SM, Vreugdenhil D, Zabeau M, Visser RGF (1996) Visualisation of differential gene expression using a novel method of RNA fingerprinting based on AFLP: analysis of gene expression during potato tuber development. Plant J 9: 745-753
8. Balandin T, Castresana C (2002) AtCOX17, an Arabidopsis homolog of the yeast copper chaperone COX17. Plant Physiol 129: 1852-1857
9. Ballas N, Wong LM, Theologis A (1993) Identification of the auxin-responsive element, AuxRE, in the primary indoleacetic acid-induced gene, PS-IAA4/5, of pea (Pisum sativum). J Mol Biol 233: 580-596
10. Borsane O, Díaz P, Agius MF, Valpuesta V, Monza J (2001) Water generates an oxidative stress through the induction of a specific Cu/Zn superoxide dismutase in Lotus corniculatus leaves. Plant Sci 161: 757-763
11. Bowler C, van Camp W, van Montagu M, Inzé D (1994) Superoxide dismutase in plants. Crit Rev Plant Sci 13: 199-218
12. Church MG, Gilbert W (1984) Genomic sequencing. Proc Natl Acad Sci USA 81: 1991-1995
13. Claassens MMJ, Vreugdenhil D (2000) Is dormancy of potato tubers the reverse of tuber initiation? Potato Res 43: 347-369
14. Culotta VC, Klomp LW, Strain J, Casareno RL, Krems B, Gitlin JD (1997) The copper chaperone for superoxide dismutase. J Biol Chem 272: 23469-23472
15. Cutter EG (1978) Structure and development of the potato plant. In PM Harris, ed, The Potato Crop. Chapman and Hall, London, pp 70-152
16. Elliott KA, Shirsat AH (1998) Promoter region of the extA extensine gene from Brassica napus control activation in response to wounding and tensile stress. Plant Mol Biol 37: 675-687
17. Esau K (1977) Membranous modifications in sieve element plastids of spinach affected by the aster yellows disease. J Ultrastruct Res 59: 87-100
18. Ewing EE, Struik PC (1992) Tuber formation in potato: induction, initiation, and growth. In Horticultural Review, Vol 14. John Wiley & Sons, New York, pp 89-198
19. Fossati T (2002) Plant RNA extraction using GenElute mammalian total RNA miniprep kit. Origins Nr 6: 12-13
20. Gamonet F, Lauquin GJM (1998) The Saccharomyces cerevisiae LYS7 gene is involved in oxidative stress protection. Eur J Biochem 251: 716-723
21. Giuliano G, Pichersky E, Malik VS, Timko MP, Scolnik PA, Cashmore AR (1988) An evolutionary conserved protein binding sequence upstream of a plant light-regulated gene. Proc Natl Acad Sci USA 85: 7089-7093
22. Glerum DM, Shtanko A, Tzagoloff A (1996) Characterisation of COX17, a yeast gene in copper metabolism and assembly of cytochrome oxidase. J Biol Chem 271: 14504-14509
23. Gregory LE (1956) Some factors for tuberisation in the potato plant. Am J Bot 43: 281-288
24. Guilfoyle T, Hagen G, Ulmasov T, Murfett J (1998) How does auxin turn on genes? Plant Physiol 118: 341-347
25. Hagen G, Guilfoyle T (2002) Auxin-responsive gene expression: genes, promoters and regulatory factors. Plant Mol Biol 49: 373-385
26. Harrison MD, Jones CE, Dameron CT (1999) Copper chaperones: function, structure and copper-binding properties. J Biol Inorg Chem 4: 145-153
27. Heeres P, Schipers-Rozenboom M, Jacobsen E, Visser RGF (2002) Transformation of a large number of potato varieties: genotype-dependent variation in efficiency and somaclonal variability. Euphytica 124: 13-22
28. Hendriks T, Vreugdenhil D, Stiekema WJ (1991) Patatin and four serine proteinase inhibitor genes are differentially expressed during potato tuber development. Plant Mol Bol 17: 385-394
29. Higgins DG, Sharp PM (1989) Fast and sensitive multiple sequence alignments on a microcomputer. CABIOS 5: 151-153
30. Higo K, Ugawa Y, Iwamoto M, Korenaga T (1999) Plant cis-acting regulatory DNA elements (PLACE) database: 1999. Nucleic Acids Res 27: 297-300
31. Himelblau E, Mira H, Lin SJ, Culotta VC, Peñarrubia L, Amasino RM (1998) Identification of a functional homolog of the yeast copper homeostasis gene ATX1 from Arabidopsis. Plant Physiol 117: 1227-1234
32. Hulzink RJM, de Groot PFM, Croes AF, Quaedvlieg W, Twell D, Wullems GJ, van Herpen MMA (2002) The 5′-untranslated region of the ntp303 gene strongly enhances translation during pollen tube growth, but not during pollen maturation. Plant Physiol 129: 342-353
33. Jackson SD, Willmitzer L (1994) Jasmonic acid spraying does not induce tuberisation in short-day-requiring potato species kept in non-inducing conditions. Planta 194: 155-159
34. Kumar D, Wareing PF (1974) Studies on tuberisation of Solanum andigena: II. Growth hormones and tuberisation. New Phytol 73: 833-840
35. Leeuwen W, Hagendoorn MJM, Ruttink T, Poecke R, van der Plas LHW, van der Krol AR (2000) The use of luciferase reporter system for in planta gene expression studies. Plant Mol Biol Rep 18: 143a-143t
36. Li PH (1985) Potato Physiology. Academic Press, Harcourt Brace Jovanovich Publishers, Philadelphia, PA, pp 1-586
37. Lin S, Culotta VC (1995) The ATX1 Gene of Saccharomyces cerevisiae encodes a small metal homeostasis factor that protects cells against reactive oxygen toxicity. Proc Natl Acad Sci USA 92: 3784-3788
38. Lin SJ, Pufahl RA, Dancis A, O'Holloran TV, Culotta VC (1997) A role for the Saccharomyces cerevisiae ATX1 gene in copper trafficking and iron transport. J Biol Chem 272: 9215-9220
39. Liu ZB, Ulmasov T, Shi X, Hagen G, Guilfoyle TJ (1994) The soybean GH3 promoter contains multiple auxin-inducible elements. Plant Cell 6: 645-657
40. Martinez CA, Loureiro ME, Oliva MA, Maestri M (2001) Differential responses of superoxide dismutases in freezing resistant Solanum curbilobum and freezing sensitive Solanum tuberosum subjected to oxidative and water stress. Plant Sci 160: 505-515
41. McCord JM, Fridovich I (1969) Superoxide dismutase: an enzymatic function for erythrocuprein (hemocuprein). J Biol Chem 244: 6049-6055
42. Mira H, Martinez-Garcia F, Peñarrubia L (2001b) Evidence for the plant-specific intercellular transport of the Arabidopsis copper chaperone CCH. Plant J 25: 521-528
43. Mira H, Vilar M, Péres-Payá E, Peñarrubia L (2001a) Functional and conformational properties of the exclusive C-domain from the Arabidopsis copper chaperone (CCH). Biochem J 357: 545-549
44. Müller-Röber BT, Koßmann J, Hannah C, Willmitzer L, Sonnewald U (1990) One of two different ADP-glucose pyrophosphorylase genes from potato responds strongly to elevated levels of sucrose. Mol Gen Genet 224: 136-146
45. O'Halloran TV, Culotta VC (2000) Metallochaperones, an intracellular shuttle service for metal ions. J Biol Chem 275: 25057-25060
46. Pekker I, Tel-Or E, Mittler R (2002) Reactive oxygen intermediates and glutathione regulate the expression of cytosolic ascorbate peroxidase during iron-mediated oxidative stress in bean. Plant Mol Biol 49: 429-438
47. Perl A, Aviv D, Willmitzer L, Galun E (1991) In vitro tuberization potatoes harboring β-glucuronidase linked to a palatin promoter: effects of sucrose levels and photoperiods. Plant Sci 73: 87-95
48. Piechulla B, Merforth N, Rudolph B (1998) Identification of tomato Lhc promoter region necessary for circadian expression. Plant Mol Biol 38: 655-662
49. Rao MV, Paliyath G, Ormrod DP (1996) Ultraviolet-B and ozone-induced biochemical changes in antioxidant enzymes of Ambidopsis thaliana. Plant Physiol 110: 125-136
50. Rogers SO, Bendich AJ (1988) Extraction of DNA from plant tissues. Plant Mol Biol Manual A6: 1-10
51. Rojas-Beltran JA, Dejaeghere F, Abdallakotb M, duJardin P (2000) Expression and activity of antioxidant enzymes during potato dormancy. Potato Res 43: 383-393
52. Rushton PJ, Torres JT, Parniske M, Wernert P, Hahlbrock K, Somssich IE (1996) Interaction of elicitor-induced DNA-binding protein with elicitor response elements in the promoter of parsley PR1 genes. EMBO J 15: 5690-5700
53. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular Cloning: A Laboratory Manual, Ed 2. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
54. Schmidt PJ, Rae TD, Pufahl RA, Hamma T, Strain J, O'Halloran TV, Culotta VC (1999) Multiple protein domains contribute to the action of the copper chaperone foe superoxide dismutase. J Biol Chem 274: 23719-23725
55. Sherf BA, Wood KV (1994) Firefly luciferase engineered for improved genetic reporting. Promega Notes 49: 14-21
56. Siebert PD, Chenchik A, Kellogg DE, Lukyanov KA, Lukyanov SA (1995) An improved PCR method for walking in uncloned genomic DNA. Nucleic Acids Res 23: 1087-1088
57. Struik PC, Boon EJ, Vreugdenhil D (1987) Effects of extracellular extracts from leaves on the tuberization of cuttings of potato (Solanum tuberosum L.). Plant Physiol 84: 214-217
58. Taylor MA, Mad Arif SA, Kumar A, Davies HV, Srobie LA, Pearce S, Flavell AJ (1992) Expression and sequence analysis of cDNAs induced during early stages of tuberization in different organs of the potato plant (Solanum tuberosum L.). Plant Mol Biol 20: 641-651
59. Trindade LM (2003) Potato life-cycle: from genes to promoters to cis-acting elements. PhD thesis. Wageningen University, The Netherlands
60. Trindade LM, Horvath B, Bachem C, Jacobsen E, Visser RGF (2003) Isolation and functional characterisation of a stolon specific promoter from potato (Solanum tuberosum L.). Gene 303: 77-87
61. van Camp W, Inzé D, van Montagu M (1997) The regulation and function of tobacco superoxide dismutases. Free Radic Biol Med 23: 515-520
62. Visser RGF (1991) Regeneration and transformation of potato by Agrobacterium tumefaciens. In K Lindsey, ed, Plant Tissue Culture Manual B5. Dordrecht, The Netherlands, pp 1-9
63. Visser RGF, Vreugdenhill D, Hendriks T, Jacobsen E (1994) Gene expression and carbohydrate content during stolon to tuber transition in potatoes (Solanum tuberosum). Physiol Planta 90: 285-292
64. Vreugdenhil D, van Dijk W (1989) Effects of ethylene on the tuberization of potato (Solanum tuberosum) cuttings. Plant Growth Regul 8: 31-39
65. Vreugdenhil D, Struik PC (1989) An integrated view of the hormonal regulation of tuber formation in potato. Physiol Plant 75: 525-531
66. Wiltshire JJJ, Cobb AH (1996) A review of the physiology of potato tuber dormancy. Ann Appl Biol 129: 553-569
67. Wintz H, Vulpe C (2002) Plant copper chaperones. Biochem Soc Trans 30: 732-735
68. Xu N, Hagen G, Guilfoyle T (1997) Multiple auxin response modules in the soybean SAUR 15A promoter. Plant Sci 126: 193-201
69. Xu X, van Lammeren AAM, Vermeer E, Vreugdenhil D (1998) The role of gibberellins, abscisic acid, and sucrose in the regulation of potato tuber formation in vitro. Plant Physiol 117: 575-584
70. Yu Q, Rengel Z (1999) Drought and salinity differentially influence activities of superoxide dismutase in narrow leafed lupins. Plant Sci 142: 1-11
71. Zhu H, Shipp E, Sanchez RJ, Liba A, Stine JE, Hart J, Gralla EB, Nersissian AM, Valentine JS (2000) Cobalt(2+) binding to human and tomato copper chaperone for superoxide dismutase: implications for the metal ion transfer mechanism. Biochemistry 39: 5413-5421