Enzymatic E-colicins Bind to Their Target Receptor BtuB by Presentation of a Small Binding Epitope on a Coiled-coil Scaffold

Journal of Biological Chemistry

Volumn 278, Issue 42, 2003, Pages 40953-40958

  Mohanty, Arun K ^a   Bishop, Christopher M ^b   Bishop, Thomas C ^b,c   Wimley, William C ^b   Wiener, Michael C ^a  

^a UNIVERSITY OF VIRGINIA   (United States)

^b TULANE UNIVERSITY HEALTH SCIENCES CENTER   (United States)

^c UNIVERSITY OF NEW ORLEANS   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

CELL MEMBRANES; ENTROPY; ESCHERICHIA COLI; FLUORESCENCE; MOLECULES; TOXIC MATERIALS; VIRUSES;

COLICINS;

ENZYMES;

COLICIN; E COLICIN; EPITOPE; SYNTHETIC PEPTIDE; UNCLASSIFIED DRUG;

ARTICLE; BACTERIAL OUTER MEMBRANE; BINDING AFFINITY; CROSS LINKING; DISULFIDE BOND; ESCHERICHIA COLI; FLUORESCENCE POLARIZATION; NONHUMAN; PRIORITY JOURNAL; RECEPTOR BINDING;

AMINO ACID SEQUENCE; ANISOTROPY; BACTERIAL OUTER MEMBRANE PROTEINS; CALCIUM; CIRCULAR DICHROISM; COLICINS; CRYSTALLOGRAPHY, X-RAY; DOSE-RESPONSE RELATIONSHIP, DRUG; ENTROPY; EPITOPES; ESCHERICHIA COLI PROTEINS; KINETICS; MEMBRANE TRANSPORT PROTEINS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; PEPTIDES; PROTEIN BINDING; PROTEIN CONFORMATION; PROTEIN FOLDING; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; RECEPTORS, PEPTIDE;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; UNIDENTIFIED BACTERIOPHAGE;

EID: 0142135121     PISSN: 00219258     EISSN: None     Source Type: Journal    
DOI: 10.1074/jbc.M308227200     Document Type: Article

References (33)

1. Knodel, L. A., Celli, J., and Finlay, B. B. (2001) Nat. Rev. Mol. Cell Biol. 2, 578-588
2. Dragic, T., Litwin, V., Allaway, G. P., Martin, S. R., Huang, Y., Nagashima, K. A., Cayanan, C., Maddon, P. J., Koup, R. A., Moore, J. P., and Paxton, W. A. (1996) Nature 381, 667-673
3. Lifson, J. D., Feinberg, M. B., Reyes, G. R., Rabin, L., Banapour, B., Chakrabarti, S., Moss, B., Wong-Staal, F., Steimer, K. S., and Engelman, E. G. (1986) Nature 323, 725-728
4. Lazdunski, C. J., Bouveret, E., Rigal, A., Journet, L., Lloubes, R., and Benedetti, H. (1998) J. Bacteriol. 180, 4993-5002
5. Cramer, W. A., Heymann, J. B., Schendel, S. L., Deriy, B. N., Cohen, F. S., Elkins, P. A., and Stauffacher, C. V. (1995) Annu. Rev. Biophys. Biomol. Struct. 24, 611-641
6. Braun, V., Pilsl, H., and Gross, P. (1994) Arch. Microbiol. 161, 199-206
7. James, R., Kleanthous, C., and Moore, G. R. (1996) Microbiology 142, 1569-1580
8. Heller, K., Mann, B. J., and Kadner, R. J. (1985) J. Bacteriol. 161, 896-903
9. Chimento, D. P., Mohanty, A. K., Kadner, R. J., and Wiener, M. C. (2003) Nat. Struct. Biol. 10, 394-401
10. Di Masi, D. R., White, J. C., Schnaitman, C. A., and Bradbeer, C. (1973) J. Bacteriol. 115, 506-513
11. Cavard, D. (1994) FEMS Microbiol. Lett. 116, 37-42
12. Wiener, M., Freymann, D., Ghosh, P., and Stroud, R. M. (1997) Nature 385, 461-464
13. Soelaiman, S., Jakes, K., Wu, N., Li, C., and Shoham, M. (2001) Mol. Cell 8, 1053-1062
14. Penfold, C. N., Garinot-Schneider, C., Hemmings, A. M., Moore, G. R., Kleanthous, C., and James, R. (2000) Mol. Microbiol. 38, 639-649
15. Boetzel, R., Collins, E. S., Clayden, N. J., Kleanthous, C., James, R., and Moore, G. R. (2003) Faraday Discuss. 122, 145-162
16. Zakharov, S. D., Bano, S., Zhalnina, M., and Cramer, W. A. (2003) Biophys. J. 84, 324a (abstr.)
17. Bano, S., Zakharov, S. D., Zhalnina, M., Lindeberg, M., Shoham, M., and Cramer, W. A. (2002) Biophys. J. 82, 554a (abstr.)
18. Hocart, S. J., Jain, R., Murphy, W. A., Taylor, J. E., and Coy, D. H. (1999) J. Med. Chem. 42, 1863-1871
19. Tam, J. P., Wu, C., and Yang, J. L. (2000) Eur. J. Biochem. 267, 3289-3300
20. Guex, N., and Peitsch, M. C. (1997) Electrophoresis 18, 2714-2723
21. Wimley, W. C., Creamer, T. P., and White, S. H. (1996) Biochemistry 35, 5109-5124
22. Grant, G. A. (1992) Synthetic Peptides: A User's Guide, W. H. Freeman and Co., New York
23. Atherton E., and Sheppard, R. C. (1989) Solid Phase Peptide Synthesis, IRL Press, Oxford
24. Piszkiewicz, D., Landon, M., and Smith, E. L. (1970) Biochem. Biophys. Res. Comm. 40, 1173-1178
25. Tam, J., Wu, C.-R., Liu, W., and Zhang, J.-W. (1991) J. Am. Chem. Soc. 113, 6657-6662
26. Nelson, J. W., and Kallenbach, N. R. (1986) Proteins 1, 211-217
27. Chimento, D. P., Mohanty, A. K., Kadner, R. J., and Wiener, M. C. (2003) Acta Crystallogr. Sect. D Biol. Crystallogr. 59, 509-511
28. Budavari, S. (1996) The Merck Index: An Encyclopedia of Chemicals, Drugs and Biologicals, 12th Ed., p. 1710, Whitehouse Station, NJ
29. Kenakin, T. (1997) Pharmacological Analysis of Drug/Receptor Interaction, 3rd Ed., pp. 242-288, Lippincott-Raven, New York
30. Johnson, W. C., Jr. (1990) Proteins 7, 205-214
31. Bradbeer, C., Reynolds, P. R., Bauler, G. M., and Fernandez, M. T. (1986) J. Biol. Chem. 261, 2520-2523
32. Smarda, J., and Macholan, L. (2000) Folia Microbiol. 45, 379-385
33. Cao, Z., and Klebba, P. E. (2002) Biochimie (Paris) 84, 399-412