The near attack conformation approach to the study of the chorismate to prephenate reaction

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 21, 2003, Pages 12015-12020

  Hur, Sun ^a   Bruice, Thomas C ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ARGININE; BACTERIAL ENZYME; CHORISMIC ACID; GLUTAMINE; PERPHENATE; PLANT EXTRACT; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ARTICLE; CALCULATION; CATALYSIS; CATALYST; CHEMICAL BOND; CHEMICAL REACTION; CHEMICAL STRUCTURE; CLAISEN REARRANGEMENT; CONFORMATION; CONTACT ANGLE; ENERGY; NEAR ATTACK CONFORMATION; PRIORITY JOURNAL; REACTION ANALYSIS; REACTION TIME;

ANIMALS; ANTIBODIES, CATALYTIC; BACILLUS SUBTILIS; CATALYSIS; CATALYTIC DOMAIN; CHORISMATE MUTASE; CHORISMIC ACID; CYCLOHEXANECARBOXYLIC ACIDS; CYCLOHEXENES; ELECTROSTATICS; ENZYME ACTIVATION; ESCHERICHIA COLI; HYDROPHOBICITY; MODELS, MOLECULAR; MOLECULAR CONFORMATION; MUTAGENESIS, SITE-DIRECTED; PROTEIN CONFORMATION; THERMODYNAMICS; WATER;

BACILLUS SUBTILIS; BACTERIA (MICROORGANISMS); ESCHERICHIA COLI;

EID: 0142091405     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.1534873100     Document Type: Article

References (23)

1. Hur, S. & Bruice, T. C. (2003) J. Am. Chem. Soc. 125, 5964-5972.
2. Hur, S. & Bruice, T. C. (2003) J. Am. Chem. Soc. 125, 1472-1473.
3. Hur, S. & Bruice, T. C. (2002) Proc. Natl. Acad. Sci. USA 99, 1176-1181.
4. Haynes, M. R., Stura, E. A., Hilvert, D. & Wilson, I. A. (1994) Science 63, 646-652.
5. Kuczera, K. (1996) J. Comput. Chem. 17, 1726-1749.
6. Brooks, B. R., Bruccoleri, R. E., Olafson, B. D., States, D. J., Swaminathan, S. & Karplus, M. (1983) J. Comput. Chem. 4, 187-217.
7. Jorgensen, W. L., Chandrasekhar, J., Madura, J. D., Impey, R. W. & Klein, M. L. (1983) J. Chem. Phys. 79, 926-935.
8. Lee, A. Y., Karplus, P. A., Ganem, B. & Clardy, J. (1995) J. Am. Chem. Soc. 117, 3627-3628.
9. Chook, Y. M., Gray, J. V., Ke, H. & Lipscomb, W. N. (1994) J. Mol. Biol. 240, 476-500.
10. Bartlett, P. A., Nakagawa, Y., Johnson, C. R., Reich, S. H. & Luis, A. (1988) J. Org. Chem. 53, 3195-3210.
11. Kottalam, J. & Case, D. A. (1988) J. Am. Chem. Soc. 110, 7690-7697.
12. Nussinov, A.-J. L. R. (1998) Proteins Struct. Funct. Genet. 32, 111-127.
13. Copley, S. D. & Knowles, J. R. (1987) J. Am. Chem. Soc. 109, 5008-5013.
14. Guo, H., Cui, Q., Lipscomb, W. L. & Karplus, M. (2003) Angew. Chem. Int. Ed. Engl. 42, 1508-1511.
15. Campbell, A. P., Tarasow, T. M., Massefski, W., Wright, P. & Hilvert, D. (1993) Proc. Natl. Acad. Sci. USA 90, 8663-8667.
16. Repasky, M. P., Guimaraes, C. R. W., Chandrasekhar, J., Tirado-Rives, J. & Jorgensen, W. L. (2003) J. Am. Chem. Soc. 125, 6663-6672.
17. Guimaraes, C. R. W., Repasky, M. P., Chandrasekhar, J., Tirado-Rives, J. & Jorgensen, W. L. (2003) J. Am. Chem. Soc. 125, 6892-6899.
18. Kienhoefer, A., Kast, P. & Hilvert, D. (2003) J. Am. Chem. Soc. 125, 3206-3207.
19. Andrews, P. R., Smith, G. D. & Young, I. G. (1973) Biochemistry 12, 3492-3498.
20. Liu, D. R., Cload, S. T., Pastor, R. M. & Schultz, P. G. (1996) J. Am. Chem. Soc. 118, 17891790.
21. Shurki, A., Strajbi, M., Villa, J. & Warshel, A. (2002) J. Am. Chem. Soc. 124, 4097-4107.
22. Cramer, C. J. & Truhlar, D. G. (1992) J. Am. Chem. Soc. 114, 8794-8799.
23. Strajbl, M., Shurki, A., Kato, M. & Warshel, A. (2003) J. Am. Chem. Soc. 125, 10228-10237.