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Volumn 43, Issue 5, 2003, Pages 1412-1422

Structural Flexibility of Non-Nucleoside HIV-1 Reverse Transcriptase Inhibitor: 9-Cl TIBO as Explained by Potential Energy Surface and 13C and 1H NMR Calculations, Based on ab initio and Density Functional Study

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONS; CRYSTAL STRUCTURE; NUCLEAR MAGNETIC RESONANCE; POTENTIAL ENERGY; PROBABILITY DENSITY FUNCTION;

EID: 0142008937     PISSN: 00952338     EISSN: None     Source Type: Journal    
DOI: 10.1021/ci0340299     Document Type: Article
Times cited : (10)

References (31)
  • 2
    • 0032437454 scopus 로고    scopus 로고
    • The Role of Nonnucleoside Reverse Transcriptase Inhibitors (NNRTIs) in the Therapy of HIV-1 Infection
    • De Clercq, E. The Role of Nonnucleoside Reverse Transcriptase Inhibitors (NNRTIs) in the Therapy of HIV-1 Infection. Antiviral Res. 1998, 38, 153-179.
    • (1998) Antiviral Res. , vol.38 , pp. 153-179
    • De Clercq, E.1
  • 3
    • 0034059835 scopus 로고    scopus 로고
    • The HIV-1 Reverse Transcription (RT) Process as Target for RT Inhibitors
    • Jonckheere, H.; Anne, J.; De Clercq, E. The HIV-1 Reverse Transcription (RT) Process as Target for RT Inhibitors. Med. Res. Rev. 2000, 20, 129-154.
    • (2000) Med. Res. Rev. , vol.20 , pp. 129-154
    • Jonckheere, H.1    Anne, J.2    De Clercq, E.3
  • 5
    • 0141967053 scopus 로고
    • Nonnucleoside Inhibitors of HIV-1 Reverse Transcriptase. Perspect
    • Young, S. D. Nonnucleoside Inhibitors of HIV-1 Reverse Transcriptase. Perspect. Drug Discov. Des. 1993, 47, 155-169.
    • (1993) Drug Discov. Des. , vol.47 , pp. 155-169
    • Young, S.D.1
  • 6
    • 0028941196 scopus 로고
    • Antiviral Therapy of Human Immunodeficiency Virus Reverse Infection
    • De Clercq, E. Antiviral Therapy of Human Immunodeficiency Virus Reverse Infection. Clin. Microbiol. Rev. 1995, 8, 200-239.
    • (1995) Clin. Microbiol. Rev. , vol.8 , pp. 200-239
    • De Clercq, E.1
  • 8
    • 0035912717 scopus 로고    scopus 로고
    • Nonnucleoside Reverse Transcriptase Inhibitors are Chemical Enhancers of Dimerization of the HIV Type 1 Reverse Transcriptase
    • Tachedjian, G.; Orlova, M.; Sarafianos, S. G.; Arnold, E.; Goff, S. P. Nonnucleoside Reverse Transcriptase Inhibitors are Chemical Enhancers of Dimerization of the HIV Type 1 Reverse Transcriptase. Proc. Natl. Acad. Sci. 2001, 98, 7188-7193.
    • (2001) Proc. Natl. Acad. Sci. , vol.98 , pp. 7188-7193
    • Tachedjian, G.1    Orlova, M.2    Sarafianos, S.G.3    Arnold, E.4    Goff, S.P.5
  • 9
    • 0028172345 scopus 로고
    • Locations of Anti-AIDs Drug Binding Sites and Resistance Mutations in the 3-Dimensionals Structure of HIV-1 Reverse Transcriptase: Implication for Mechanisms of Drug inhibition and Resistance
    • Tantillo, C.; Ding, J. P.; Jacobo Molina, A.; Nanni, R. G.; Boyer, P. L. ; Hughes, S. H.; Pauwels, R.; Andries, K.; Janssen, P. A. J.; Arnold, E, Locations of Anti-AIDs Drug Binding Sites and Resistance Mutations in the 3-Dimensionals Structure of HIV-1 Reverse Transcriptase: Implication for Mechanisms of Drug inhibition and Resistance. J. Mol. Biol. 1994, 243, 369-387.
    • (1994) J. Mol. Biol. , vol.243 , pp. 369-387
    • Tantillo, C.1    Ding, J.P.2    Jacobo Molina, A.3    Nanni, R.G.4    Boyer, P.L.5    Hughes, S.H.6    Pauwels, R.7    Andries, K.8    Janssen, P.A.J.9    Arnold, E.10
  • 10
    • 0028924567 scopus 로고
    • Mechanism of inhibition of HIV-1 Reverse Transcriptase by Nonnucleoside linhibitors
    • Esnouf, R.; Ren, J.; Ros, C.; Jones, Y.; Stammers, D.; Stuart, D. Mechanism of inhibition of HIV-1 Reverse Transcriptase by Nonnucleoside linhibitors. Struct Biol. 1995, 2, 303-308.
    • (1995) Struct Biol. , vol.2 , pp. 303-308
    • Esnouf, R.1    Ren, J.2    Ros, C.3    Jones, Y.4    Stammers, D.5    Stuart, D.6
  • 11
    • 0033562423 scopus 로고    scopus 로고
    • Major Subdomain Rearrangement in HIV-1 Reverse Transcriptase Simulated by Molecular Dynamics
    • Madrid, M.; Jacobo-Molina, A.; Ding, J.; Arnold, E. Major Subdomain Rearrangement in HIV-1 Reverse Transcriptase Simulated by Molecular Dynamics. Protein-Struct. Funct. Genet. 1999, 35, 332-337.
    • (1999) Protein-Struct. Funct. Genet. , vol.35 , pp. 332-337
    • Madrid, M.1    Jacobo-Molina, A.2    Ding, J.3    Arnold, E.4
  • 12
    • 0029075207 scopus 로고
    • Structure of HIV-1 RT/TIBO R86183 Complex Reveals Similarity in the Binding of Diverse Nonnucleoside Inhibitors
    • Ding, J.; Das, K.; Moereels, H.; Koymans, L.; Andries, K.; Jannsen, P. A. J.; Hughes, S. H.; Arnold, E. Structure of HIV-1 RT/TIBO R86183 Complex Reveals Similarity in the Binding of Diverse Nonnucleoside Inhibitors. Struct. Biol. 1995, 2, 407-415.
    • (1995) Struct. Biol. , vol.2 , pp. 407-415
    • Ding, J.1    Das, K.2    Moereels, H.3    Koymans, L.4    Andries, K.5    Jannsen, P.A.J.6    Hughes, S.H.7    Arnold, E.8
  • 14
    • 0027424829 scopus 로고
    • Differential Antiviral Activity of two TIBO derivatives Against the Human Immunodeficiency and Marine Leukemia Viruses Alone and in Combination with Other Anti-HIV Agents
    • Buckheit, R. W.; Germany-Decker, J.; Hollingshead, M. G.; Allen, L. B.; Shannon, W. M.; Janssen, P. A. J.; Chirigos, M. A. Differential Antiviral Activity of two TIBO derivatives Against the Human Immunodeficiency and Marine Leukemia Viruses Alone and in Combination with Other Anti-HIV Agents. AIDS. Res. Hum. Retroviruses 1993, 9, 1097-1106.
    • (1993) AIDS. Res. Hum. Retroviruses , vol.9 , pp. 1097-1106
    • Buckheit, R.W.1    Germany-Decker, J.2    Hollingshead, M.G.3    Allen, L.B.4    Shannon, W.M.5    Janssen, P.A.J.6    Chirigos, M.A.7
  • 15
    • 0028029961 scopus 로고
    • New Ttetrahydroimidazo[4,5,l-jk]benzodiazepin-2(lH)-one and -thione derivatives are Potent Inhibitors of Human Immunodeficiency Virus Type 1 Replication and are Synergistic with 2',3'-dideoxynucleoside Analogs
    • Pauwels, R.; Andries, K.; Debyser, Z.; Kukla, M. J.; Schols, D.; Breslin, H. J.; Woestenborghs, R.; Desmyter, J.; Janssen, M. A. C.; De Clercq, E.; Janssen, P. A. J. New Ttetrahydroimidazo[4,5,l-jk]benzodiazepin-2(lH)-one and -thione derivatives are Potent Inhibitors of Human Immunodeficiency Virus Type 1 Replication and are Synergistic with 2',3'-dideoxynucleoside Analogs. Antimicrob. Agents Chemother. 1994, 38, 2863-270.
    • (1994) Antimicrob. Agents Chemother. , vol.38 , pp. 2863-2870
    • Pauwels, R.1    Andries, K.2    Debyser, Z.3    Kukla, M.J.4    Schols, D.5    Breslin, H.J.6    Woestenborghs, R.7    Desmyter, J.8    Janssen, M.A.C.9    De Clercq, E.10    Janssen, P.A.J.11
  • 16
    • 0032982257 scopus 로고    scopus 로고
    • Conformational Study of the HIV-1 Reverse Transcriptase Inhibitor l-[(2-Hydroxyethoxy)methyl]-6-(phenylthio)thymine (KEPT)
    • Lawtrakul, L.; Hannongbua, S.; Beyer, A.; Wolschann, P. Conformational Study of the HIV-1 Reverse Transcriptase Inhibitor l-[(2-Hydroxyethoxy)methyl]-6-(phenylthio)thymine (KEPT). Biol. Chem. 1999, 380, 265-267.
    • (1999) Biol. Chem. , vol.380 , pp. 265-267
    • Lawtrakul, L.1    Hannongbua, S.2    Beyer, A.3    Wolschann, P.4
  • 17
    • 0035732843 scopus 로고    scopus 로고
    • Conformational Analysis of Nevirapine, a Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor, Based on Quantum Mechanical Calculations
    • Hannongbua, S.; Prasitthichokekul, S.; Pungpo, P. Conformational Analysis of Nevirapine, a Non-nucleoside HIV-1 Reverse Transcriptase Inhibitor, Based on Quantum Mechanical Calculations. Compt.-Aided Mol. Des. 2001, .75, 997-1004.
    • (2001) Compt.-Aided Mol. Des. , vol.75 , pp. 997-1004
    • Hannongbua, S.1    Prasitthichokekul, S.2    Pungpo, P.3
  • 18
    • 0026500228 scopus 로고
    • Ciystal Structure of Nevirapine, a Nonnucleoside Inhibitor of HIV-1 Reverse Transcriptase, and Computational Alignment with a Structurally Diverse Inhibitor
    • Mui, P. W.; Jacober, S. P.; Hargrave, K. D.; Adams, J. Ciystal Structure of Nevirapine, a Nonnucleoside Inhibitor of HIV-1 Reverse Transcriptase, and Computational Alignment with a Structurally Diverse Inhibitor. J. Med. Chem. 1992, 35, 201-202.
    • (1992) J. Med. Chem. , vol.35 , pp. 201-202
    • Mui, P.W.1    Jacober, S.P.2    Hargrave, K.D.3    Adams, J.4
  • 20
    • 33748579863 scopus 로고
    • Ab initio Study of Tetrahydro-irnidazo[4,5,l-jk][l,4]-benzodiazepin-2(lH)-one and -thione (TIBO) Derivatives R79882 and R82913
    • Peelers, A.; Van Alsenoy, C.; Dillen, J.; Geise, H. J. Ab initio Study of Tetrahydro-irnidazo[4,5,l-jk][l,4]-benzodiazepin-2(lH)-one and -thione (TIBO) Derivatives R79882 and R82913. J. Mol. Struct. (THEOCHEM) 1995, 333, 99-110.
    • (1995) J. Mol. Struct. (THEOCHEM) , vol.333 , pp. 99-110
    • Peelers, A.1    Van Alsenoy, C.2    Dillen, J.3    Geise, H.J.4
  • 21
    • 0035897124 scopus 로고    scopus 로고
    • Conformational Preferences of Non-nucleoside HIV-1 Reverse Transcriptase Inhibitors
    • Parreira, R. L.; Abrahao, O., Jr.; Galembeck, S. E. Conformational Preferences of Non-nucleoside HIV-1 Reverse Transcriptase Inhibitors. Tetrahedron. 2001, 57, 3243-3253.
    • (2001) Tetrahedron. , vol.57 , pp. 3243-3253
    • Parreira, R.L.1    Abrahao O., Jr.2    Galembeck, S.E.3
  • 22
    • 57249096108 scopus 로고    scopus 로고
    • Molecular Calculations on the Conformation of the HIV-1 Reverse Transcriptase Inhibitor (+)-(s)-4,5,6,7-Tetrahydro-8-chloro-5-methyl-6-(3-methyl2-butenyl)-imidazol[4,5, l-jk][l,4]benzodiazepin-2(lH)-thione(8-Chloro-TIBO)
    • Hannongbua, S.; Saen-oon, S.; Pungpo, P.; Wolschann, P. Molecular Calculations on the Conformation of the HIV-1 Reverse Transcriptase Inhibitor (+)-(s)-4,5,6,7-Tetrahydro-8-chloro-5-methyl-6-(3-methyl2-butenyl)-imidazol[4,5, l-jk][l,4]benzodiazepin-2(lH)-thione(8-Chloro-TIBO), Monatsh. Chem. 2001, 132, 1157-1169.
    • (2001) Monatsh. Chem. , vol.132 , pp. 1157-1169
    • Hannongbua, S.1    Saen-Oon, S.2    Pungpo, P.3    Wolschann, P.4
  • 24
    • 0027403554 scopus 로고
    • Conformational Analysis of the Reverse Transcriptase Inhibitor (+)-(S)-4,5,6,7-tetrahydroirnidazo-9-chloro-5-methyl-6-(3-rnethyl-2-butenyl) imidazo[4,5,l-jk][l,4]-benzodiazepin-2-thione(TIBO;R82913)
    • Caldwell, G. W.; Guathier, A. D.; Leo, G. C.; Kukla, M. J. Conformational Analysis of the Reverse Transcriptase Inhibitor (+)-(S)-4,5,6,7-tetrahydroirnidazo-9-chloro-5-methyl-6-(3-rnethyl-2-butenyl) imidazo[4,5,l-jk][l,4]-benzodiazepin-2-thione(TIBO;R82913). Tetrahedron Lett. 1993, 34, 2063-2066.
    • (1993) Tetrahedron Lett. , vol.34 , pp. 2063-2066
    • Caldwell, G.W.1    Guathier, A.D.2    Leo, G.C.3    Kukla, M.J.4
  • 25
    • 0029645409 scopus 로고
    • The Structure of HIV-1 Reverse Transcriptase Complexed with 9-chloro-TIBO: Lessons for Inhibitor Design
    • Ren, J.; Esnouf, R.; Hopkims, A.; Ross, C.; Jone, Y.; Stammers, D.; Stuart, D. The Structure of HIV-1 Reverse Transcriptase Complexed with 9-chloro-TIBO: Lessons for Inhibitor Design. Structure 1995, 3, 915-926.
    • (1995) Structure , vol.3 , pp. 915-926
    • Ren, J.1    Esnouf, R.2    Hopkims, A.3    Ross, C.4    Jone, Y.5    Stammers, D.6    Stuart, D.7
  • 28
    • 11744305193 scopus 로고
    • Efficient Implementation of The Gauge Independent Atomic Orbital Method for NMR Chemical Shift Calculations
    • Wasikowski, K.; Hilton, J. F.; Pulay, P. Efficient Implementation of The Gauge Independent Atomic Orbital Method for NMR Chemical Shift Calculations. J. Am. Chem. Soc. 1990, 112, 8251-8262.
    • (1990) J. Am. Chem. Soc. , vol.112 , pp. 8251-8262
    • Wasikowski, K.1    Hilton, J.F.2    Pulay, P.3
  • 29
    • 0002522655 scopus 로고
    • Continuum Solvation Models: Classical and QuantumMechanical Implementations
    • Kipkowitz, K. B., Boyd D. B., Eds.; VCH: New York
    • Cramer, C. J.; Truhlar, D. G. Continuum Solvation Models: Classical and QuantumMechanical Implementations. Reviews in Computational Chemistry, Kipkowitz, K. B., Boyd D. B., Eds.; VCH: New York, 1995; Vol. 6, pp 1-72.
    • (1995) Reviews in Computational Chemistry , vol.6 , pp. 1-72
    • Cramer, C.J.1    Truhlar, D.G.2
  • 30
    • 84962428823 scopus 로고    scopus 로고
    • The IEF version of the PCM solvation method: An overview of a new method addressed to study molecular solutes at the QM ab initio level
    • Tomasi, J.; Mennucci, B.; Cances, E. The IEF version of the PCM solvation method: an overview of a new method addressed to study molecular solutes at the QM ab initio level. J. Mol. Struct. (THEOCHEM). 1999, 464, 211-226.
    • (1999) J. Mol. Struct. (THEOCHEM). , vol.464 , pp. 211-226
    • Tomasi, J.1    Mennucci, B.2    Cances, E.3
  • 31
    • 0000584523 scopus 로고    scopus 로고
    • Ab initio Method for the Calculation of NMR Shielding and Indirect Spin - Spin Coupling Constants
    • Helgaker, T.; Jaszunski, M.; Ruud, K. Ab initio Method for the Calculation of NMR Shielding and Indirect Spin - Spin Coupling Constants. Chem. Rev. 1999, 99, 293-352.
    • (1999) Chem. Rev. , vol.99 , pp. 293-352
    • Helgaker, T.1    Jaszunski, M.2    Ruud, K.3


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