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Volumn 31, Issue 19, 2003, Pages 5644-5653

RNAi-mediated depletion of the 15 KH domain protein, vigilin, induces death of dividing and non-dividing human cells but does not initially inhibit protein synthesis

Author keywords

[No Author keywords available]

Indexed keywords

MESSENGER RNA; NUCLEIC ACID BINDING PROTEIN; RNA; SINGLE STRANDED DNA; UNCLASSIFIED DRUG; VIGILIN; VITELLOGENIN; CARRIER PROTEIN; HIGH DENSITY LIPOPROTEIN BINDING PROTEIN; PROTEIN; RNA BINDING PROTEIN; SATELLITE DNA;

EID: 0141974921     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: 10.1093/nar/gkg768     Document Type: Article
Times cited : (23)

References (37)
  • 1
    • 0029988528 scopus 로고    scopus 로고
    • Three-dimensional structure and stability of the KH domain: Molecular insights into the fragile X syndrome
    • Musco, G., Stier, G., Joseph, C., Castiglione Morelli, M.A., Nilges, M., Gibson, T.J. and Pastore, A. (1996) Three-dimensional structure and stability of the KH domain: molecular insights into the fragile X syndrome. Cell, 85, 237-245.
    • (1996) Cell , vol.85 , pp. 237-245
    • Musco, G.1    Stier, G.2    Joseph, C.3    Castiglione Morelli, M.A.4    Nilges, M.5    Gibson, T.J.6    Pastore, A.7
  • 2
    • 0028214848 scopus 로고
    • An estrogen-inducible protein binds specifically to a sequence in the 3′ untranslated region of estrogenstabilized vitellogenin mRNA
    • Dodson, R.E. and Shapiro, D.J. (1994) An estrogen-inducible protein binds specifically to a sequence in the 3′ untranslated region of estrogenstabilized vitellogenin mRNA. Mol. Cell. Biol., 14, 3130-3138.
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 3130-3138
    • Dodson, R.E.1    Shapiro, D.J.2
  • 3
    • 0029135214 scopus 로고
    • Scp160p, a new yeast protein associated with the nuclear membrane and the endoplasmic reticulum, is necessary for maintenance of exact ploidy
    • Wintersberger, U., Kuhne, C. and Karwan, A. (1995) Scp160p, a new yeast protein associated with the nuclear membrane and the endoplasmic reticulum, is necessary for maintenance of exact ploidy. Yeast, 11, 929-944.
    • (1995) Yeast , vol.11 , pp. 929-944
    • Wintersberger, U.1    Kuhne, C.2    Karwan, A.3
  • 5
    • 0032007850 scopus 로고    scopus 로고
    • Trna is entrapped in similar, but distinct, nuclear and cytoplasmic ribonucleoprotein complexes, both of which contain vigilin and elongation factor 1 alpha
    • Kruse, C., Grunweller, A., Willkomm, D.K., Pfeiffer, T., Hartmann, R.K. and Muller, P.K. (1998) tRNA is entrapped in similar, but distinct, nuclear and cytoplasmic ribonucleoprotein complexes, both of which contain vigilin and elongation factor 1 alpha. Biochem. J., 329, 615-621.
    • (1998) Biochem. J. , vol.329 , pp. 615-621
    • Kruse, C.1    Grunweller, A.2    Willkomm, D.K.3    Pfeiffer, T.4    Hartmann, R.K.5    Muller, P.K.6
  • 6
    • 0029847582 scopus 로고    scopus 로고
    • Evidence for a novel cytoplasmic tRNA-protein complex containing the KH-multidomain protein vigilin
    • Kruse, C., Grunweller, A., Notbohm, H., Kugler, S., Purschke, W.G. and Muller, P.K. (1996) Evidence for a novel cytoplasmic tRNA-protein complex containing the KH-multidomain protein vigilin. Biochem. J., 320, 247-252.
    • (1996) Biochem. J. , vol.320 , pp. 247-252
    • Kruse, C.1    Grunweller, A.2    Notbohm, H.3    Kugler, S.4    Purschke, W.G.5    Muller, P.K.6
  • 7
    • 0033169060 scopus 로고    scopus 로고
    • DDP1, a single-stranded nucleic acid-binding protein of Drosophila, associates with pericentric heterochromatin and is functionally homologous to the yeast Scp160p, which is involved in the control of cell ploidy
    • Cortes, A., Huertas, D., Fanti, L., Pimpinelli, S., Marsellach, F.X., Pina, B. and Azorin, F. (1999) DDP1, a single-stranded nucleic acid-binding protein of Drosophila, associates with pericentric heterochromatin and is functionally homologous to the yeast Scp160p, which is involved in the control of cell ploidy. EMBO J., 18, 3820-3833.
    • (1999) EMBO J. , vol.18 , pp. 3820-3833
    • Cortes, A.1    Huertas, D.2    Fanti, L.3    Pimpinelli, S.4    Marsellach, F.X.5    Pina, B.6    Azorin, F.7
  • 9
    • 0027198073 scopus 로고
    • Expression of vigilin in chicken cartilage and bone
    • Plenz, G., Gan, Y., Raabe, H.M. and Muller, P.K. (1993) Expression of vigilin in chicken cartilage and bone. Cell Tissue Res., 273, 381-389.
    • (1993) Cell Tissue Res. , vol.273 , pp. 381-389
    • Plenz, G.1    Gan, Y.2    Raabe, H.M.3    Muller, P.K.4
  • 10
    • 0344911043 scopus 로고    scopus 로고
    • KH domain: One motif, 2-folds
    • Grishin, N.V. (2001) KH domain: one motif, 2-folds. Nucleic Acids Res., 9638-643.
    • (2001) Nucleic Acids Res. , pp. 9638-9643
    • Grishin, N.V.1
  • 11
    • 0032847774 scopus 로고    scopus 로고
    • Dissecting FMR1, the protein responsible for fragile X syndrome, in its structural and functional domains
    • Adinolfi, S., Bagni, C., Musco, G., Gibson, T., Mazzarella, L. and Pastore, A. (1999) Dissecting FMR1, the protein responsible for fragile X syndrome, in its structural and functional domains. RNA, 5, 1248-1258.
    • (1999) RNA , vol.5 , pp. 1248-1258
    • Adinolfi, S.1    Bagni, C.2    Musco, G.3    Gibson, T.4    Mazzarella, L.5    Pastore, A.6
  • 12
    • 0036053733 scopus 로고    scopus 로고
    • Regulation of pathways of mRNA destabilization and stabilization
    • Dodson, R.E. and Shapiro, D.J. (2002) Regulation of pathways of mRNA destabilization and stabilization. Prog. Nucleic Acid Res. Mol. Biol., 72, 129-164.
    • (2002) Prog. Nucleic Acid Res. Mol. Biol. , vol.72 , pp. 129-164
    • Dodson, R.E.1    Shapiro, D.J.2
  • 13
    • 0028236525 scopus 로고
    • Essential role for KH domains in RNA binding: Impaired RNA binding by a mutation in the KH domain of FMR1 that causes fragile X syndrome
    • Siomi, H., Choi, M., Siomi, M.C., Nussbaum, R.L. and Dreyfuss, G. (1994) Essential role for KH domains in RNA binding: impaired RNA binding by a mutation in the KH domain of FMR1 that causes fragile X syndrome. Cell, 77, 33-39.
    • (1994) Cell , vol.77 , pp. 33-39
    • Siomi, H.1    Choi, M.2    Siomi, M.C.3    Nussbaum, R.L.4    Dreyfuss, G.5
  • 14
    • 0030992812 scopus 로고    scopus 로고
    • The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo
    • Buckanovich, R.J. and Darnell, R.B. (1997) The neuronal RNA binding protein Nova-1 recognizes specific RNA targets in vitro and in vivo. Mol. Cell. Biol., 17, 3194-3201.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 3194-3201
    • Buckanovich, R.J.1    Darnell, R.B.2
  • 15
    • 0036791671 scopus 로고    scopus 로고
    • A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins
    • Ishizuka, A., Siomi, M.C. and Siomi, H. (2002) A Drosophila fragile X protein interacts with components of RNAi and ribosomal proteins. Genes Dev., 16, 2497-2508.
    • (2002) Genes Dev. , vol.16 , pp. 2497-2508
    • Ishizuka, A.1    Siomi, M.C.2    Siomi, H.3
  • 16
    • 0036792769 scopus 로고    scopus 로고
    • Fragile X-related protein and VIG associate with the RNA interference machinery
    • Caudy, A.A., Myers, M., Hannon, G.J. and Hammond, S.M. (2002) Fragile X-related protein and VIG associate with the RNA interference machinery. Genes Dev., 16, 2491-2496.
    • (2002) Genes Dev. , vol.16 , pp. 2491-2496
    • Caudy, A.A.1    Myers, M.2    Hannon, G.J.3    Hammond, S.M.4
  • 17
    • 0031862144 scopus 로고    scopus 로고
    • In vitro genetic analysis of the RNA binding site of vigilin, a multi-KH-domain protein
    • Kanamori, H., Dodson, R.E. and Shapiro, D.J. (1998) In vitro genetic analysis of the RNA binding site of vigilin, a multi-KH-domain protein. Mol. Cell. Biol., 18, 3991-4003.
    • (1998) Mol. Cell. Biol. , vol.18 , pp. 3991-4003
    • Kanamori, H.1    Dodson, R.E.2    Shapiro, D.J.3
  • 18
    • 0028943527 scopus 로고
    • Purification and characterization of an estrogen-regulated Xenopus liver polysomal nuclease involved in the selective destabilization of albumin mRNA
    • Dompenciel, R.E., Gamepudi, V.R. and Schoenberg, D.R. (1995) Purification and characterization of an estrogen-regulated Xenopus liver polysomal nuclease involved in the selective destabilization of albumin mRNA. J. Biol. Chem., 270, 6108-6118.
    • (1995) J. Biol. Chem. , vol.270 , pp. 6108-6118
    • Dompenciel, R.E.1    Gamepudi, V.R.2    Schoenberg, D.R.3
  • 19
    • 0033739569 scopus 로고    scopus 로고
    • Vigilin binding selectively inhibits cleavage of the vitellogenin mRNA 3′-untranslated region by the MRNA endonuclease polysomal ribonuclease 1
    • Cunningham, K.S., Dodson, R.E., Nagel, M.A., Shapiro, D.J. and Schoenberg, D.R. (2000) Vigilin binding selectively inhibits cleavage of the vitellogenin mRNA 3′-untranslated region by the MRNA endonuclease polysomal ribonuclease 1. Proc. Natl Acad. Sci. USA, 97, 12498-12502.
    • (2000) Proc. Natl Acad. Sci. USA , vol.97 , pp. 12498-12502
    • Cunningham, K.S.1    Dodson, R.E.2    Nagel, M.A.3    Shapiro, D.J.4    Schoenberg, D.R.5
  • 20
    • 0034175922 scopus 로고    scopus 로고
    • Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast
    • Lang, B.D. and Fridovich-Keil, J.L. (2000) Scp160p, a multiple KH-domain protein, is a component of mRNP complexes in yeast. Nucleic Acids Res., 28, 1576-1584.
    • (2000) Nucleic Acids Res. , vol.28 , pp. 1576-1584
    • Lang, B.D.1    Fridovich-Keil, J.L.2
  • 21
    • 0035875121 scopus 로고    scopus 로고
    • The brefeldin A resistance protein Bfr1p is a component of polyribosome-associated mRNP complexes in yeast
    • Lang, B.D., Li, A., Black-Brewster, H.D. and Fridovich-Keil, J.L. (2001) The brefeldin A resistance protein Bfr1p is a component of polyribosome-associated mRNP complexes in yeast. Nucleic Acids Res., 29, 2567-2574.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 2567-2574
    • Lang, B.D.1    Li, A.2    Black-Brewster, H.D.3    Fridovich-Keil, J.L.4
  • 22
    • 0035844145 scopus 로고    scopus 로고
    • Scp160p, an RNA-binding, polysome-associated protein, localizes to the endoplasmic reticulum of Saccharomyces cerevisiae in a microtubule-dependent manner
    • Frey, S., Pool, M. and Seedorf, M. (2001) Scp160p, an RNA-binding, polysome-associated protein, localizes to the endoplasmic reticulum of Saccharomyces cerevisiae in a microtubule-dependent manner. J. Biol. Chem., 276, 15905-15912.
    • (2001) J. Biol. Chem. , vol.276 , pp. 15905-15912
    • Frey, S.1    Pool, M.2    Seedorf, M.3
  • 23
    • 0037388030 scopus 로고    scopus 로고
    • Scp160p associates with specific mRNAs in yeast
    • Li, A.M., Watson, A. and Fridovich-Keil, J.L. (2003) Scp160p associates with specific mRNAs in yeast. Nucleic Acids Res., 31, 1830-1837.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 1830-1837
    • Li, A.M.1    Watson, A.2    Fridovich-Keil, J.L.3
  • 24
    • 0034110065 scopus 로고    scopus 로고
    • DDP1, a heterochromatin-associated multi-KH-domain protein of Drosophila melanogaster, interacts specifically with centromeric satellite DNA sequences
    • Cortes, A. and Azorin, F. (2000) DDP1, a heterochromatin-associated multi-KH-domain protein of Drosophila melanogaster, interacts specifically with centromeric satellite DNA sequences. Mol. Cell. Biol., 20, 3860-3869.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 3860-3869
    • Cortes, A.1    Azorin, F.2
  • 25
    • 0027335767 scopus 로고
    • Vigilin is a cytoplasmic protein. A study on its expression in primary cells and in established cell lines of different species
    • Neu-Yilik, G., Zorbas, H., Gloe, T.R., Raabe, H.M., Hopp-Christensen, T.A. and Muller, P.K. (1993) Vigilin is a cytoplasmic protein. A study on its expression in primary cells and in established cell lines of different species. Eur. J. Biochem., 213, 727-736.
    • (1993) Eur. J. Biochem. , vol.213 , pp. 727-736
    • Neu-Yilik, G.1    Zorbas, H.2    Gloe, T.R.3    Raabe, H.M.4    Hopp-Christensen, T.A.5    Muller, P.K.6
  • 27
    • 0035942736 scopus 로고    scopus 로고
    • Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells
    • Elbashir, S.M., Harborth, J., Lendeckel, W., Yalcin, A., Weber, K. and Tuschl, T. (2001) Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells. Nature, 411, 494-498.
    • (2001) Nature , vol.411 , pp. 494-498
    • Elbashir, S.M.1    Harborth, J.2    Lendeckel, W.3    Yalcin, A.4    Weber, K.5    Tuschl, T.6
  • 28
    • 0035694237 scopus 로고    scopus 로고
    • Identification of essential genes in cultured mammalian cells using small interfering RNAs
    • Harborth, J., Elbashir, S.M., Bechert, K., Tuschl, T. and Weber, K. (2001) Identification of essential genes in cultured mammalian cells using small interfering RNAs. J. Cell Sci., 114, 4557-4565.
    • (2001) J. Cell Sci. , vol.114 , pp. 4557-4565
    • Harborth, J.1    Elbashir, S.M.2    Bechert, K.3    Tuschl, T.4    Weber, K.5
  • 29
    • 0017108905 scopus 로고
    • Synchronization of some human cell strains by serum and calcium starvation
    • Griffin, M.J. (1976) Synchronization of some human cell strains by serum and calcium starvation. In Vitro, 12, 393-398.
    • (1976) Vitro , vol.12 , pp. 393-398
    • Griffin, M.J.1
  • 30
    • 0017295167 scopus 로고
    • Regulation of fibroblast cell cycle by serum
    • Brooks, R.F. (1976) Regulation of fibroblast cell cycle by serum. Nature, 260, 248-250.
    • (1976) Nature , vol.260 , pp. 248-250
    • Brooks, R.F.1
  • 31
    • 0028921251 scopus 로고
    • A critical appraisal of synchronization methods applied to achieve maximal enrichment of HeLa cells in specific cell cycle phases
    • Knehr, M., Poppe, M., Enulescu, M., Eickelbaum, W., Stoehr, M., Schroeter, D. and Paweletz, N. (1995) A critical appraisal of synchronization methods applied to achieve maximal enrichment of HeLa cells in specific cell cycle phases. Exp. Cell Res., 217, 546-553.
    • (1995) Exp. Cell Res. , vol.217 , pp. 546-553
    • Knehr, M.1    Poppe, M.2    Enulescu, M.3    Eickelbaum, W.4    Stoehr, M.5    Schroeter, D.6    Paweletz, N.7
  • 32
    • 0032509239 scopus 로고    scopus 로고
    • Importance of poly(ADP-ribose) polymerase and its cleavage in apoptosis. Lesson from an uncleavable mutant
    • Oliver, F.J., de la Rubia, G., Rolli, V., Ruiz-Ruiz, M.C., de Murcia, G. and Murcia, J.M. (1998) Importance of poly(ADP-ribose) polymerase and its cleavage in apoptosis. Lesson from an uncleavable mutant. J. Biol. Chem., 273, 33533-33539.
    • (1998) J. Biol. Chem. , vol.273 , pp. 33533-33539
    • Oliver, F.J.1    De la Rubia, G.2    Rolli, V.3    Ruiz-Ruiz, M.C.4    De Murcia, G.5    Murcia, J.M.6
  • 33
    • 0036646504 scopus 로고    scopus 로고
    • Molecular basis of sequence-specific single-stranded DNA recognition by KH domains: Solution structure of a complex between hnRNP K KH3 and single-stranded DNA
    • Braddock, D.T., Baber, J.L., Levens, D. and Clore, G.M. (2002) Molecular basis of sequence-specific single-stranded DNA recognition by KH domains: solution structure of a complex between hnRNP K KH3 and single-stranded DNA. EMBO J., 21, 3476-3485.
    • (2002) EMBO J. , vol.21 , pp. 3476-3485
    • Braddock, D.T.1    Baber, J.L.2    Levens, D.3    Clore, G.M.4
  • 34
    • 0037186549 scopus 로고    scopus 로고
    • Structure and dynamics of KH domains from FBP bound to single-stranded DNA
    • Braddock, D.T., Louis, J.M., Baber, J.L., Levens, D. and Clore, G.M. (2002) Structure and dynamics of KH domains from FBP bound to single-stranded DNA. Nature, 415, 1051-1056.
    • (2002) Nature , vol.415 , pp. 1051-1056
    • Braddock, D.T.1    Louis, J.M.2    Baber, J.L.3    Levens, D.4    Clore, G.M.5
  • 35
    • 0030973538 scopus 로고    scopus 로고
    • Vigilin, a ubiquitous protein with 14 K homology domains, is the estrogen-inducible vitellogenin mRNA 3′-untranslated region-binding protein
    • Dodson, R.E. and Shapiro, D.J. (1997) Vigilin, a ubiquitous protein with 14 K homology domains, is the estrogen-inducible vitellogenin mRNA 3′-untranslated region-binding protein. J. Biol. Chem., 272, 12249-12252.
    • (1997) J. Biol. Chem. , vol.272 , pp. 12249-12252
    • Dodson, R.E.1    Shapiro, D.J.2
  • 36
    • 0029022283 scopus 로고
    • Tissue distribution, hormone regulation and evidence for a human homologue of the estrogen-inducible Xenopus laevis vitellogenin mRNA binding protein
    • Dodson, R.E., Acena, M.R. and Shapiro, D.J. (1995) Tissue distribution, hormone regulation and evidence for a human homologue of the estrogen-inducible Xenopus laevis vitellogenin mRNA binding protein. J. Steroid Biochem. Mol. Biol., 52, 505-515.
    • (1995) J. Steroid Biochem. Mol. Biol. , vol.52 , pp. 505-515
    • Dodson, R.E.1    Acena, M.R.2    Shapiro, D.J.3
  • 37
    • 0035803583 scopus 로고    scopus 로고
    • Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate
    • Elbashir, S.M., Martinez, J., Patkaniowska, A., Lendeckel, W. and Tuschl, T. (2001) Functional anatomy of siRNAs for mediating efficient RNAi in Drosophila melanogaster embryo lysate. EMBO J., 20, 6877-6888.
    • (2001) EMBO J. , vol.20 , pp. 6877-6888
    • Elbashir, S.M.1    Martinez, J.2    Patkaniowska, A.3    Lendeckel, W.4    Tuschl, T.5


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