Secondary structure analyses of protein films on gold surfaces by circular dichroism

Biochemical and Biophysical Research Communications

Volumn 310, Issue 2, 2003, Pages 606-611

  Shimizu, Masafumi ^a,f   Kobayashi, Kazutoshi ^b   Morii, Hisayuki ^c   Mitsui, Keita ^d   Knoll, Wolfgang ^e   Nagamune, Teruyuki ^a  

^a UNIVERSITY OF TOKYO   (Japan)

^b Showa Denko Materials Co   (Japan)

^c NATIONAL INSTITUTE OF ADVANCED INDUSTRIAL SCIENCE AND TECHNOLOGY AIST   (Japan)

^d TOKYO INSTITUTE OF TECHNOLOGY   (Japan)

^e MAX PLANCK INSTITUTE FOR POLYMER RESEARCH   (Germany)

^f KEIO UNIVERSITY   (Japan)

Author keywords

Circular dichroism; Secondary structure; Self assembly; Ultra thin protein film

Indexed keywords

2,2' DITHIODIACETIC ACID; ACETIC ACID DERIVATIVE; GOLD; PROTEIN; UNCLASSIFIED DRUG;

AIR; ARTICLE; CHEMICAL MODIFICATION; CIRCULAR DICHROISM; FILM; PRIORITY JOURNAL; PROTEIN DENATURATION; PROTEIN STRUCTURE; STRUCTURE ANALYSIS;

EID: 0141720307     PISSN: 0006291X     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbrc.2003.09.054     Document Type: Article

References (41)

1. Ueyama S., Isoda S. Vector electron-transfer from a flavin Langmuir-Blodgett monolayer to cytochrome-c. J. Electroanal. Chem. 310:1991;281-292.
2. Yasuda Y., Sugino H., Toyotama H., Hirata Y., Hara M., Miyake J. Control of protein orientation in molecular photoelectric devices using Langmuir-Blodgett films of photosynthetic reaction centers from Rhodopseudomonas viridis. Bioelectrochem. Bioenerg. 34:1994;135-139.
3. Ueyama S., Isoda S., Hatanaka H., Shibano Y. Macroscopically rapid electron transfer of cytochrome c(522) with high thermostability at bare and surface-modified gold electrodes. J. Electroanal. Chem. 401:1996;227-230.
4. Koyama K., Sumi M., Kamo N., Lanyi J. Photoelectric response of halorhodopsin from Natronobacterium pharaonis. Bioelectrochem. Bioenerg. 46:1998;289-292.
5. Nicolini C., Erokhin V., Paddeu S., Paternolli C., Ram M.K. Toward bacteriorhodopsin based photocells. Biosens. Bioelectron. 14:1999;431-437.
6. Nakamura C., Hasegawa M., Yasuda Y., Miyake J. Self-assembling photosynthetic reaction centers on electrodes for current generation. Appl. Biochem. Biotechnol. 84-86:2000;401-408.
7. Choi J.-W., Nam Y.-S., Oh B.-K., Lee W.H., Fujihira M. Artificial molecular photodiode consisting of GFP/viologen hetero-thin film. Synth. Met. 117:2001;241-243.
8. Shimizu M., Kamiya N., Kitayama A., Nagamune T. Self-assembly of electron transport protein using oligonucleotide hybridization. Colloids Surf. B. 25:2002;69-79.
9. Knoll W. Polymer thin-films and interfaces characterized with evanescent light. Makromol. Chemie-Macromol. Chem. Phys. 192:1991;2827-2856.
10. Stayton P.S., Olinger J.M., Jiang M., Bohn P.W., Sligar S.G. Genetic-engineering of surface attachment sites yields oriented protein monolayers. J. Am. Chem. Soc. 114:1992;9298-9299.
11. Lvov Y., Ariga K., Ichinose I., Kunitake T. Assembly of multicomponent protein films by means of electrostatic layer-by-layer adsorption. J. Am. Chem. Soc. 117:1995;6117-6123.
12. Kobayashi K., Shimizu M., Nagamune T., Sasabe H., Fang Y., Knoll W. Monolayer formation of cytochrome b562 on gold surfaces and its reconstitution reaction studied by surface plasmon resonance spectroscopy. Bull. Chem. Soc. Jpn. 75:2002;1707-1713.
13. Ijiro K., Ringsdorf H., Birch-Hirschfeld E., Hoffmann S., Schilken U., Strube M. Protein-DNA double and triple layers: interaction of biotinylated DNA fragments with solid supported streptavidin layers. Langmuir. 14:1998;2796-2800.
14. Sigal G.B., Bamdad C., Barberis A., Strominger J., Whitesides G.M. A self-assembled monolayer for the binding and study of histidine-tagged proteins by surface plasmon resonance. Anal. Chem. 68:1996;490-497.
15. Kobayashi K., Ishii N., Sasabe H., Knoll W. Monomolecular layer formation of ferritin molecules on an amphiphilic cyclodextrin derivative at the air/water interface. Biosci. Biotechnol. Biochem. 65:2001;176-179.
16. Furuno T., Sasabe H., Ikegami A. Imaging two-dimensional arrays of soluble proteins by atomic force microscopy in contact mode using a sharp supertip. Ultramicroscopy. 70:1998;125-131.
17. Firestone M.A., Shank M.L., Sligar S.G., Bohn P.W. Film architecture in biomolecular assemblies. Effect of linker on the orientation of genetically engineered surface-bound proteins. J. Am. Chem. Soc. 118:1996;9033-9041.
18. Aoki S., Zhou H.S., Honma I., Nagamune T., Komiyama H. Observation of cytochrome b-562 adsorption on gold-particle surface by optical absorption measurement. Surf. Rev. Lett. 3:1996;1137-1141.
19. Zhou H.S., Aoki S., Honma I., Hirasawa M., Nagamune T., Komiyama H. Conformational change of protein cytochrome b-562 adsorbed on colloidal gold particles; absorption band shift. Chem. Commun. 1997;605-606.
20. Kondo A., Oku S., Higashitani K. Structural changes in protein molecules adsorbed on ultrafine silica particles. J. Colloid Int. Sci. 143:1991;214-222.
21. Itagaki E., Hager L.P. Studies on cytochrome b562 of Escherichia coli. I. Purification and crystallization of cytochrome b562. J. Biol. Chem. 241:1966;3687-3695.
22. Barker P.D., Butler J.L., deOliveira P., Hill H.A.O., Hunt N.I. Direct electrochemical studies of cytochromes b562. Inorg. Chim. Acta. 252:1996;71-77.
23. Hamachi I., Tanaka S., Tsukiji S., Shinkai S., Shimizu M., Nagamune T. Photocontrol of the redox state of ruthenium-tris(bipyridine)-appended cytochrome b562. Chem. Commun. 1997;1735-1736.
24. Hamachi I., Takashima H., Tsukiji S., Shinkai S., Nagamune T., Oishi S. Electron transfer from Zn-protoporphyrin IX to ruthenium ammine attached at His63 of reconstituted cytochrome b562. Chem. Lett. 1999;551-552.
25. Myer Y.P., Bullock P.A. Cytochrome b562 from Escherichia coli: conformational, configurational, and spin-state characterization. Biochemistry. 17:1978;3723-3729.
26. Bullock P.A., Myer Y.P. Circular dichroism and resonance Raman studies of cytochrome b562 from Escherichia coli. Biochemistry. 17:1978;3084-3091.
27. Feng Y.Q., Sligar S.G. Effect of heme binding on the structure and stability of Escherichia coli apocytochrome b562. Biochemistry. 30:1991;10150-10155.
28. Mathews F.S., Bethge P.H., Czerwinski E.W. The structure of cytochrome b562 from Escherichia coli at 2.5. Å resolution J. Biol. Chem. 254:1979;1699-1706.
29. Lederer F., Glatigny A., Bethge P.H., Bellamy H.D., Matthew F.S. Improvement of the 2.5. Å resolution model of cytochrome b562 by redetermining the primary structure and using molecular graphics J. Mol. Biol. 148:1981;427-448.
30. Hamada K., Bethge P.H., Mathews F.S. Refined structure of cytochrome b562 from Escherichia coli at 1.4. Å resolution J. Mol. Biol. 247:1995;947-962.
31. Arnesano F., Banci L., Bertini I., Faraone-Mennella J., Rosato A., Barker P.D., Fersht A.R. The solution structure of oxidized Escherichia coli cytochrome b562. Biochemistry. 38:1999;8657-8670.
32. Kobayashi K., Imabayashi S., Fujita K., Nonaka K., Kakiuchi T., Sasabe H., Knoll W. Self-assembled monolayers of heme derivatives on a gold surface. Bull. Chem. Soc. Jpn. 73:2000;1993-2000.
33. Ulman A. Formation and structure of self-assembled monolayers. Chem. Rev. 96:1996;1533-1554.
34. Uosaki K., Kondo T., Zhang X.-Q., Yanagida M. Very efficient visible-light-induced uphill electron transfer at a self-assembled monolayer with a porphyrin-ferrocene-thiol linked molecule. J. Am. Chem. Soc. 119:1997;8367-8368.
35. Fujita K., Hara M., Sasabe H., Knoll W. Solvatochromism of a merocyanine derivative in a self-assembled monolayer on gold substrates. Langmuir. 14:1998;7456-7462.
36. Fujita K., Bunjes N., Nakajima K., Hara M., Sasabe H., Knoll W. Macrodipole interaction of helical-peptides in a self-assembled monolayer on gold substrate. Langmuir. 14:1998;6167-6172.
37. Tamada K., Nagasawa J., Nakanishi F., Abe K., Ishida T., Hara M., Knoll W. Structure and growth of hexyl azobenzene thiol SAMs on Au(111). Langmuir. 14:1998;3264-3271.
38. Takiguchi H., Sato K., Ishida T., Abe K., Yase K., Tamada K. Delicate surface reaction of dialkyl sulfide self-assembled monolayers on Au(111). Langmuir. 16:2000;1703-1710.
39. Teale F.W.J. Cleavage of haem-protein link by acid methylethylketone. Biochim. Biophys. Acta. 35:1959;543.
40. Chen Y.H., Yang J.T., Chau K.H. Determination of Helix and b form of proteins in aquous solution by circular dichroism. Biochemistry. 13:1974;3350-3359.
41. Weber P.C., Salemme F.R., Mathews F.S., Bethge P.H. On the evolutionary relationship of the 4-alpha-helical heme proteins. The comparison of cytochrome b562 and cytochrome c′, J. Biol. Chem. 256:1981;7702-7704.