Light and circadian regulation in the expression of LHY and Lhcb genes in Phaseolus vulgaris

Plant Molecular Biology

Volumn 52, Issue 5, 2003, Pages 981-997

  Kaldis, Athanasios Dimitrios ^a   Kousidis, Panagiotis ^a   Kesanopoulos, Konstantinos ^a   Prombona, Anastasia ^a  

^a Institute of Biology   (Greece)

Author keywords

Circadian regulation; Lhcb; Light induction; Phaseolus; PvLHY

Indexed keywords

MOLECULAR BIOLOGY; OSCILLATIONS; PLANTS (BOTANY);

CIRCADIAN CLOCK FUNCTIONS;

GENES;

AMINO ACID SEQUENCE; BASE SEQUENCE; CIRCADIAN RHYTHM; CLONING, MOLECULAR; DNA, COMPLEMENTARY; DNA-BINDING PROTEINS; GENE EXPRESSION REGULATION, PLANT; LIGHT; MOLECULAR SEQUENCE DATA; PHASEOLUS; PHOTOPERIOD; PHOTOSYNTHETIC REACTION CENTER COMPLEX PROTEINS; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, AMINO ACID; TRANSCRIPTION FACTORS;

ARABIDOPSIS; ARABIDOPSIS THALIANA; EMBRYOPHYTA; PHASEOLUS (ANGIOSPERM); PHASEOLUS VULGARIS;

EID: 0141613843     PISSN: 01674412     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1025433529082     Document Type: Article

References (41)

1. Alabadí, D., Oyama, T., Yanovsky, M.J., Harmon, F.G., Más, P. and Kay, S.A. 2001. Reciprocal regulation between TOC1 and LHY/CCA1 within the Arabidopsis circadian clock. Science 293: 880-883.
2. Alabadí, D., Yanovsky, Más, P., Harmer, S.L. and Kay, S.A. 2002. Critical role for CCA1 and LHY in maintaining circadian rhythmicity in Arabidopsis. Curr. Biol. 12: 757-761.
3. Alexander, L., Falconet, D., Fristensky, B.W., White, M.J., Watson, J.C., Roe, B.A. and Thompson, W.F. 1991. Nucleotide sequence of Cab-8, a new type I gene encoding a chlorophyll a/b-binding protein of LHC II in Pisum. Plant Mol. Biol. 17: 523-526.
4. Anderson, S.L., Somers, D.E., Millar, A.J., Hanson, K., Chory, J. and Kay, S.A. 1997. Attenuation of phytochrome A and B signaling pathways by the Arabidopsis circadian clock. Plant Cell 9: 1727-1743.
5. Beator, J. and Kloppstech, K. 1994. Circadian rhythmicity in the expression of genes in higher plants. Mol. Biol. 13: 203-219.
6. Carré, I.A. and Kim, J.-Y. 2002. MYB transcription factors in the Arabidopsis circadian clock. J. Exp. Bot. 53: 1551-1557.
7. Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucl. Acids Res. 16: 10881-10890.
8. Covington, M.F., Panda, S., Liu, X.L., Strayer, C.A., Wagner, D.R. and Kay, S.A. 2001. ELF3 modulates resetting of the circadian clock in Arabidopsis. Plant Cell 13: 1305-1315.
9. Dunlap, J.C. 1999. Molecular bases for circadian clocks. Cell 96: 271-290.
10. Green, R.M., Tingay, S., Wang, Z.-Y and Tobin, E.M. 2002. Circadian rhythms confer a higher level of fitness to Arabidopsis plants. Plant Physiol. 129: 576-584.
11. Green, R.M. and Tobin, E.M. 1999. Loss of the circadian clock-associated protein 1 in Arabidopsis results in altered clock-regulated gene expression. Proc. Natl. Acad. Sci. USA 96: 4176-4179.
12. Harmer, S.L., Hogenesch, J.B., Straume, M., Chang, H.-S., Han, B., Zhu, T., Wang, X., Kreps, J.A. and Kay, S.A. 2000. Orchestrated transcription of key pathways in Arabidopsis by the circadian clock. Science 290: 2110-2113.
13. Karlin-Neumann, G., Sun, L. and Tobin, E.M. 1988. Expression of light-harvesting chlorophyll a/b protein genes is phytochrome regulated in etiolated Arabidopsis thaliana seedlings. Plant Physiol. 88: 1323-1331.
14. Kellmann, J.W., Merforth, N., Wiese, M., Pichersky, E. and Piechulla, B. 1993. Concerted circadian oscillations in transcript levels of nineteen genes in Lycopersicon esculentum (tomato). Mol. Gen. Genet. 237: 439-448.
15. Kim, J.-Y., Song, H.-R., Taylor, B.L. and Carré, I.A. 2003. Light-regulated translation mediates gated induction of the Arabidopsis clock protein LHY. EMBO J. 22: 935-944.
16. Kircher, S., Kosma-Bognar, L., Kim, L., Adam, E., Harter, K., Schäfer, E. and Nagy, F. 1999. Light quality-dependent nuclear import of the plant photoreceptors phytochrome A and B. Plant Cell 11: 1445-1456.
17. Kircher, S., Gil, P., Kosma-Bognar, L., Fejes, E., Speth, V., Husselstein-Muller, T., Bauer, D., Adam, E., Schäfer, E. and Nagy, F. 2002. Nucleocytoplasmic partitioning of the plant photoreceptors phytochrome A, B, C, D and E is regulated differentially by light and exhibits a diurnal rhythm. Plant Cell 14: 1541-1555.
18. Liu, X.L., Covington, M.F., Fankhauser, C., Chory, J. and Wagner, D.R. 2001. ELF3 encodes a circadian clock-regulated nuclear protein that functions in an Arabidopsis PHYB signal transduction pathway. Plant Cell 13: 1293-1304.
19. Makino, S., Matsushika, A., Kojima, M., Yamashino, T. and Mizuno, T. 2002. The APRR1/ATOC1 quintet implicated in circadian rhythms of Arabidopsis thaliana. I. Characterization with APRR1-overexpressing plants. Plant Cell Physiol. 43: 58-69.
20. Martínez-García, J.F., Huq, E. and Quail, P.H. 2000. Direct targeting of light signals to a promoter element-bound transcription factor. Science 288: 859-863.
21. Más, P., Alabadí, D., Yanovsky, M.J., Oyama, T. and Kay, S.A. 2003. Dual role of TOC1 in the control of circadian and photomorphogenic responses in Arabidopsis. Plant Cell 15: 223-236.
22. McWatters, H.G., Bastow, R.M., Hall, A. and Millar, A. 2000. The ELF3 zeitnehmer regulates light signalling to the circadian clock. Nature 408: 716-720.
23. Michael, T.P. and McClung, C.R. 2002. Phase-specific circadian clock regulatory elements in Arabidopsis. Plant Physiol. 130: 627-638.
24. Millar, A.J. and Kay, S.A. 1996. Integration of circadian and phototransduction pathways in the network controlling CAB gene transcription in Arabidopsis. Proc. Natl. Acad. Sci. USA 93: 15491-15496.
25. Mizoguchi, T., Wheatley, K., Hanzawa, Y., Wright, L., Mizoguchi, M., Song. H.-R., Carré, I.A. and Coupland, G. 2002. LHY and CCA1 are partially redundant genes required to maintain circadian rhythms in Arabidopsis. Dev. Cell 2: 629-641.
26. Ni, M., Tepperman, J.M. and Quail, P.H. 1998. PIF3, a phytochrome-interacting factor necessary for normal photoinduced signal transduction, is a novel basic helix-loop-helix protein. Cell 95: 657-667.
27. Ni, M., Tepperman, J.M. and Quail, P.H. 1999. Binding of phytochrome B to its nuclear signaling partner PIF3 is reversibly induced by light. Nature 400: 781-784.
28. Piechulla, B., Merforth, N. and Rudolph, B. 1998. Identification of tomato Lhc promoter regions necessary for circadian expression. Plant Mol. Biol. 38: 655-662.
29. Roden, L.C., Song, H.-R., Jackson, S., Morris, K. and Carré, I.A. 2002. Floral responses to photoperiod are correlated with the timing of rhythmic expression relative to dawn and dusk in Arabidopsis. Proc. Natl. Acad. Sci. USA 99: 13313-13318.
30. Saghai-Maroof, M.A., Soliman, K.M., Jorgensen, R.A. and Allard, R.W. 1984. Ribosomal DNA spacer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. Proc. Natl. Acad. Sci. USA 81: 8014-8018.
31. Schaffer, R., Ramsay, N., Samach, A., Corden, S., Putterill, J., Carré, I.A. and Coupland, G. 1998. The late elongate hypocotyl mutation of Arabidopsis disrupts circadian rhythms and the photoperiodic control of flowering. Cell 93: 1219-1229.
32. Somers, D.E. 1999. The physiology and molecular bases of the plant circadian clock. Plant Physiol. 121: 9-19.
33. Staiger, D., Allenbach, L., Salathia, N., Fiechter, V., Davis, S.J., Millar, A.J., Chory, J. and Fankhauser, C. 2003. The Arabidopsis SRR1 gene mediates phyB signaling and is required for normal circadian clock function. Genes Dev. 17: 256-268.
34. Strayer, C.A., Oyama, T., Schultz, T.F., Raman, R., Somers, D.E., Más, P., Panda, S., Kreps, J.A. and Kay, S.A. 2000. Cloning of the Arabidopsis clock gene TOC1, an autoregulatory response regulator homolog. Science 289: 768-771.
35. Sugiyama, N., Izawa, T., Oikawa, T. and Shimamoto, K. 2001. Light regulation of circadian clock-controlled gene expression in rice. Plant J 26: 607-615.
36. Tavladoraki, P., Kloppstech, K. and Argyroudi-Akoyunoglou, J.H. 1989. Circadian rhythm in the expression of the mRNA coding for the apoprotein of the light-harvesting complex of photosystem II. Phytochrome control and persistent far red reversibility. Plant Physiol. 90; 665-672.
37. Wang, Z.-Y., Kenigsbuch, D., Sun, L., Harel, E., Ong, M.S. and Tobin, E.M. 1997. A Myb-related transcription factor is involved in the phytochrome regulation of an Arabidopsis Lhcb gene. Plant Cell 9: 491-507.
38. Wang, Z.-Y. and Tobin, E.M. 1998. Constitutive expression of the CIRCADIAN CLOCK ASSOCIATED 1 (CCA1) gene disrupts circadian rhythms and suppresses its own expression. Cell 93: 1207-1217.
39. Wehmeyer, B., Cashmore, A.R. and Schafer, E. 1990. Photocontrol of the expression of genes encoding chlorophyll a/b binding proteins and small subunit of ribulose-1,5-bisphosphate carboxylase in etiolated seedlings of Lycopersicon esculentum (L.) and Nicotiana tabacum (L.). Plant Physiol. 93: 990-997.
40. Xu, Y. and Johnson, C.H. 2001. A clock- and light-regulated gene that links the circadian oscillator to LHCB gene expression. Plant Cell 13: 1411-1425.
41. Yamaguchi, R., Nakamura, M., Mochizuki, N., Kay, S.A. and Nagatani, A. 1999. Light-dependent translocation of a phytochrome B-GFP fusion protein to the nucleus in transgenic Arabidopsis. J Cell Biol. 145: 437-445.