-
1
-
-
0003936136
-
-
University Science Books, Sausalito, CA
-
Scott, R. A., and Mauk, A. G. (1996) in Cytochrome c. A multidisciplinary approach, University Science Books, Sausalito, CA.
-
(1996)
Cytochrome c. A Multidisciplinary Approach
-
-
Scott, R.A.1
Mauk, A.G.2
-
2
-
-
0032739830
-
Mito-chondrial cytochromes c: A comparative analysis
-
Banci, L., Bertini, I., Rosato, A., and Varani, G. (1999) Mito- chondrial cytochromes c: a comparative analysis, J. Biol. Inorg. Chem. 4, 824-837.
-
(1999)
J. Biol. Inorg. Chem.
, vol.4
, pp. 824-837
-
-
Banci, L.1
Bertini, I.2
Rosato, A.3
Varani, G.4
-
3
-
-
0025903766
-
Sequence variability in bacterial cytochromes
-
Ambler, R. P. (1991) Sequence variability in bacterial cytochromes, Biochim. Biophys. Acta 1058, 42-47.
-
(1991)
Biochim. Biophys. Acta
, vol.1058
, pp. 42-47
-
-
Ambler, R.P.1
-
4
-
-
0033595670
-
Cytochrome c-553 from the alkalophilic bacterium Bacillus pasteurii has the primary structure characteristics of a lipoprotein
-
Vanderberghe, I. H., Ciurli, S., Benini, S., and Van Beeumen, J. (1999) Cytochrome c-553 from the alkalophilic bacterium Bacillus pasteurii has the primary structure characteristics of a lipoprotein, Biochem. Biophys. Res. Commun. 264, 380-387.
-
(1999)
Biochem. Biophys. Res. Commun.
, vol.264
, pp. 380-387
-
-
Vanderberghe, I.H.1
Ciurli, S.2
Benini, S.3
Van Beeumen, J.4
-
5
-
-
0033573140
-
Still a puzzle: Why is haem covalently attached in c-type cytochromes?
-
Barker, P. D., and Ferguson, S. J. (1999) Still a puzzle: why is haem covalently attached in c-type cytochromes?, Struct. Folding Des. 7, R281-R290.
-
(1999)
Struct. Folding Des.
, vol.7
-
-
Barker, P.D.1
Ferguson, S.J.2
-
6
-
-
0022399830
-
Helix movements and the reconstruction of the haem pocket during the evolution of the cytochrome c family
-
Chothia, C., and Lesk, A. M. (1985) Helix movements and the reconstruction of the haem pocket during the evolution of the cytochrome c family, J. Mol. Biol. 182, 151-158.
-
(1985)
J. Mol. Biol.
, vol.182
, pp. 151-158
-
-
Chothia, C.1
Lesk, A.M.2
-
7
-
-
0024289198
-
Spectroscopic characterization of a high-potential monohaem cytochrome from Wolinella succinogenes, a nitrate-respiring organism. Redox and spin equilibria studies
-
Moura, I., Liu, M. Y., Costa, C., Liu, M. C., Pai, G., Xavier, A. V., LeGall, J., Payne, W. J., and Moura, J. J. (1988) Spectroscopic characterization of a high-potential monohaem cytochrome from Wolinella succinogenes, a nitrate-respiring organism. Redox and spin equilibria studies, Eur. J. Biochem. 177, 673-682.
-
(1988)
Eur. J. Biochem.
, vol.177
, pp. 673-682
-
-
Moura, I.1
Liu, M.Y.2
Costa, C.3
Liu, M.C.4
Pai, G.5
Xavier, A.V.6
LeGall, J.7
Payne, W.J.8
Moura, J.J.9
-
8
-
-
0037161297
-
Solution structure of a mono-heme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: Functional implications
-
Bartalesi, I., Bertini, I., Hajieva, P., Rosato, A., and Vasos, P. (2002) Solution structure of a mono-heme ferrocytochrome c from Shewanella putrefaciens and structural analysis of sequence-similar proteins: functional implications, Biochemistry 41, 5112-5119.
-
(2002)
Biochemistry
, vol.41
, pp. 5112-5119
-
-
Bartalesi, I.1
Bertini, I.2
Hajieva, P.3
Rosato, A.4
Vasos, P.5
-
9
-
-
0024596945
-
NMR study of the alkaline isomerization of ferricytochrome c
-
Hong, X., and Dixon, D. W. (1989) NMR study of the alkaline isomerization of ferricytochrome c, FEBS Lett. 246, 105-108.
-
(1989)
FEBS Lett.
, vol.246
, pp. 105-108
-
-
Hong, X.1
Dixon, D.W.2
-
10
-
-
0024603937
-
Mutation induced perturbation of the cytochrome c alkaline transition
-
Pearce, L. L., Gärtner, A. L., Smith, M., and Mauk, A. G. (1989) Mutation induced perturbation of the cytochrome c alkaline transition, Biochemistry 28, 3152-3156.
-
(1989)
Biochemistry
, vol.28
, pp. 3152-3156
-
-
Pearce, L.L.1
Gärtner, A.L.2
Smith, M.3
Mauk, A.G.4
-
11
-
-
0025832142
-
Effective concentrations of amino acid side chains in an unfolded protein
-
Muthukrishnan, K., and Nall, B. T. (1991) Effective concentrations of amino acid side chains in an unfolded protein, Biochemistry 30, 4706-4710.
-
(1991)
Biochemistry
, vol.30
, pp. 4706-4710
-
-
Muthukrishnan, K.1
Nall, B.T.2
-
12
-
-
0034682478
-
NMR investigation of ferricytochrome c unfolding: Detection of an equilibrium unfolding intermediate and residual structure in the denatured state
-
Russell, B. S., Melenkivitz, R., and Bren, K. L. (2000) NMR investigation of ferricytochrome c unfolding: detection of an equilibrium unfolding intermediate and residual structure in the denatured state, Proc. Natl. Acad. Sci. U.S.A. 97, 8312-8317.
-
(2000)
Proc. Natl. Acad. Sci. U.S.A.
, vol.97
, pp. 8312-8317
-
-
Russell, B.S.1
Melenkivitz, R.2
Bren, K.L.3
-
13
-
-
0036968299
-
The unfolding of oxidized c-type cytochromes: The instructive case of B. pasteurii
-
Bartalesi, I., Bertini, I., Ghosh, K., Rosato, A., and Turano, P. (2002) The unfolding of oxidized c-type cytochromes: the instructive case of B. pasteurii, J. Mol. Biol. 321, 693-701.
-
(2002)
J. Mol. Biol.
, vol.321
, pp. 693-701
-
-
Bartalesi, I.1
Bertini, I.2
Ghosh, K.3
Rosato, A.4
Turano, P.5
-
14
-
-
0037433505
-
Structural model for an alkaline form of ferricytohrome c
-
Assfalg, M., Bertini, I., Dolfi, A., Turano, P., Mauk, A. G., Rosell, F. I., and Gray, H. B. (2003) Structural model for an alkaline form of ferricytohrome c, J. Am. Chem. Soc. 125, 2913-2922.
-
(2003)
J. Am. Chem. Soc.
, vol.125
, pp. 2913-2922
-
-
Assfalg, M.1
Bertini, I.2
Dolfi, A.3
Turano, P.4
Mauk, A.G.5
Rosell, F.I.6
Gray, H.B.7
-
15
-
-
0037007168
-
NMR solution structure, backbone mobility and homology modeling of c-type cytochromes from gram-positive bacteria
-
Banci, L., Bertini, I., Ciurli, S., Dikiy, A., Dittmer, J., Rosato, A., Sciara, G., and Thompsett, A. (2002) NMR solution structure, backbone mobility and homology modeling of c-type cytochromes from gram-positive bacteria, Chem. Biol. Chem. 3, 299-310.
-
(2002)
Chem. Biol. Chem.
, vol.3
, pp. 299-310
-
-
Banci, L.1
Bertini, I.2
Ciurli, S.3
Dikiy, A.4
Dittmer, J.5
Rosato, A.6
Sciara, G.7
Thompsett, A.8
-
16
-
-
6444222991
-
Use of glass electrodes to measure acidities in deuterium oxide
-
Glasoe, P. K., and Long, F. A. (1960) Use of glass electrodes to measure acidities in deuterium oxide, J. Phys. Chem. 64, 188-190.
-
(1960)
J. Phys. Chem.
, vol.64
, pp. 188-190
-
-
Glasoe, P.K.1
Long, F.A.2
-
17
-
-
0000195671
-
Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy
-
Bodenhausen, G., and Ruben, D. J. (1980) Natural abundance nitrogen-15 NMR by enhanced heteronuclear spectroscopy, Chem. Phys. Lett. 69, 185-188.
-
(1980)
Chem. Phys. Lett.
, vol.69
, pp. 185-188
-
-
Bodenhausen, G.1
Ruben, D.J.2
-
18
-
-
0001121381
-
Deuterium exchange of poly-D,L-alanine in aqueous solution
-
Berger, A., and Linderstrøm-Lang, K. (1957) Deuterium exchange of poly-D,L-alanine in aqueous solution, Arch. Biochem. Biophys. 69, 106-118.
-
(1957)
Arch. Biochem. Biophys.
, vol.69
, pp. 106-118
-
-
Berger, A.1
Linderstrøm-Lang, K.2
-
19
-
-
0013994339
-
Hydrogen exchange in proteins
-
Hvidt, A., and Nielsen, S. O. (1966) Hydrogen exchange in proteins, Adv. Protein Chem. 21, 287-386.
-
(1966)
Adv. Protein Chem.
, vol.21
, pp. 287-386
-
-
Hvidt, A.1
Nielsen, S.O.2
-
20
-
-
0020855355
-
Hydrogen exchange and structural dynamics of proteins and nucleic acids
-
Englander, S. W., and Kallenbach, N. R. (1983) Hydrogen exchange and structural dynamics of proteins and nucleic acids, Q. Rev. Biophys. 16, 521-655.
-
(1983)
Q. Rev. Biophys.
, vol.16
, pp. 521-655
-
-
Englander, S.W.1
Kallenbach, N.R.2
-
21
-
-
0035223640
-
Measuring the conformational stability of a protein by hydrogen exchange
-
Huyghues-Despointes, B. M., Pace, C. N., Englander, S. W., and Scholtz, J. M. (2001) Measuring the conformational stability of a protein by hydrogen exchange, Methods Mol. Biol. 168, 69-92.
-
(2001)
Methods Mol. Biol.
, vol.168
, pp. 69-92
-
-
Huyghues-Despointes, B.M.1
Pace, C.N.2
Englander, S.W.3
Scholtz, J.M.4
-
22
-
-
0027250665
-
Primary structure effects on peptide group hydrogen exchange
-
Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1993) Primary structure effects on peptide group hydrogen exchange, Proteins: Struct., Funct., Genet. 17, 75-86.
-
(1993)
Proteins: Struct., Funct., Genet.
, vol.17
, pp. 75-86
-
-
Bai, Y.1
Milne, J.S.2
Mayne, L.3
Englander, S.W.4
-
24
-
-
0028067152
-
Protein stability parameters measured by hydrogen exchange
-
Bai, Y., Milne, J. S., Mayne, L., and Englander, S. W. (1994) Protein stability parameters measured by hydrogen exchange, Proteins: Struct., Funct., Genet. 20, 4-14.
-
(1994)
Proteins: Struct., Funct., Genet.
, vol.20
, pp. 4-14
-
-
Bai, Y.1
Milne, J.S.2
Mayne, L.3
Englander, S.W.4
-
25
-
-
0027169975
-
Isotope effects in peptide group hydrogen exchange
-
Connelly, G. P., Bai, Y., Jeng, M. F., and Englander, S. W. (1993) Isotope effects in peptide group hydrogen exchange, Proteins: Struct., Funct., Genet. 17, 87-92.
-
(1993)
Proteins: Struct., Funct., Genet.
, vol.17
, pp. 87-92
-
-
Connelly, G.P.1
Bai, Y.2
Jeng, M.F.3
Englander, S.W.4
-
26
-
-
0036408312
-
Thermodynamic and kinetic exploration of the energy landscape of Borrelia burgdorferi OspA by native-state hydrogen exchange
-
Yan, S., Kennedy, S. D., and Koide, S. (2002) Thermodynamic and Kinetic Exploration of the Energy Landscape of Borrelia burgdorferi OspA by Native-state Hydrogen Exchange, J. Mol. Biol. 323, 363-375.
-
(2002)
J. Mol. Biol.
, vol.323
, pp. 363-375
-
-
Yan, S.1
Kennedy, S.D.2
Koide, S.3
-
27
-
-
0000159569
-
Protein structure and the energetics of protein stability
-
Robertson, A. D., and Murphy, K. P. (1997) Protein structure and the energetics of protein stability, Chem. Rev. 97, 1251-1267.
-
(1997)
Chem. Rev.
, vol.97
, pp. 1251-1267
-
-
Robertson, A.D.1
Murphy, K.P.2
-
28
-
-
0036182617
-
A residue-specific view of the association and dissociation pathway in protein-DNA recognition
-
Kalodimos, C. G., Boelens, R., and Kaptein, R. (2002) A residue-specific view of the association and dissociation pathway in protein-DNA recognition, Nat. Struct. Biol. 9, 193-197.
-
(2002)
Nat. Struct. Biol.
, vol.9
, pp. 193-197
-
-
Kalodimos, C.G.1
Boelens, R.2
Kaptein, R.3
-
29
-
-
0029643523
-
Protein folding intermediates: Native-state hydrogen exchange
-
Bai, Y. W., Sosnick, T. R., Mayne, L., and Englander, S. W. (1995) Protein folding intermediates: native-state hydrogen exchange, Science 269, 192-197.
-
(1995)
Science
, vol.269
, pp. 192-197
-
-
Bai, Y.W.1
Sosnick, T.R.2
Mayne, L.3
Englander, S.W.4
-
30
-
-
0037172787
-
Relationship between the native-state hydrogen exchange and folding pathways of a four-helix bundle protein
-
Chu, R., Pei, W., Takei, J., and Bai, Y. (2002) Relationship between the native-state hydrogen exchange and folding pathways of a four-helix bundle protein, Biochemistry 41, 7998-8003.
-
(2002)
Biochemistry
, vol.41
, pp. 7998-8003
-
-
Chu, R.1
Pei, W.2
Takei, J.3
Bai, Y.4
-
31
-
-
0037108164
-
Populating partially unfolded forms by hydrogen exchange-directed protein engineering
-
Takei, J., Pei, W., Vu, D., and Bai, Y. (2002) Populating partially unfolded forms by hydrogen exchange-directed protein engineering, Biochemistry 41, 12308-12312.
-
(2002)
Biochemistry
, vol.41
, pp. 12308-12312
-
-
Takei, J.1
Pei, W.2
Vu, D.3
Bai, Y.4
-
32
-
-
0030840017
-
Microsecond protein folding kinetics from native-state hydrogen exchange
-
Arrington, C. B., and Robertson, A. D. (1997) Microsecond protein folding kinetics from native-state hydrogen exchange, Biochemistry 36, 8686-8691.
-
(1997)
Biochemistry
, vol.36
, pp. 8686-8691
-
-
Arrington, C.B.1
Robertson, A.D.2
-
33
-
-
0035075187
-
Kinetics of unfolding and folding from amide hydrogen exchange in native ubiquitin
-
Sivaraman, T., Arrington, C. B., and Robertson, A. D. (2001) Kinetics of unfolding and folding from amide hydrogen exchange in native ubiquitin, Nat. Struct. Biol. 8, 331-333.
-
(2001)
Nat. Struct. Biol.
, vol.8
, pp. 331-333
-
-
Sivaraman, T.1
Arrington, C.B.2
Robertson, A.D.3
-
34
-
-
0033593247
-
Defining protein ensembles with native-state NH exchange: Kinetics of interconversion and cooperative units from combined NMR and MS analysis
-
Arrington, C. B., Teesch, L. M., and Robertson, A. D. (1999) Defining protein ensembles with native-state NH exchange: kinetics of interconversion and cooperative units from combined NMR and MS analysis, J. Mol. Biol. 285, 1265-1275.
-
(1999)
J. Mol. Biol.
, vol.285
, pp. 1265-1275
-
-
Arrington, C.B.1
Teesch, L.M.2
Robertson, A.D.3
-
35
-
-
0034733386
-
Correlated motions in native proteins from MS analysis of NH exchange: Evidence for a manifold of unfolding reactions in ovomucoid third domain
-
Arrington, C. B., and Robertson, A. D. (2000) Correlated motions in native proteins from MS analysis of NH exchange: evidence for a manifold of unfolding reactions in ovomucoid third domain, J. Mol. Biol. 300, 221-232.
-
(2000)
J. Mol. Biol.
, vol.300
, pp. 221-232
-
-
Arrington, C.B.1
Robertson, A.D.2
-
36
-
-
0031866483
-
Amide protection in an early folding intermediate of cytochrome c
-
Sauder, J. M., and Roder, H. (1998) Amide protection in an early folding intermediate of cytochrome c, Folding Des. 3, 293-301.
-
(1998)
Folding Des.
, vol.3
, pp. 293-301
-
-
Sauder, J.M.1
Roder, H.2
-
37
-
-
0037126070
-
Cytochrome c folding pathway: Kinetic native-state hydrogen exchange
-
Hoang, L., Bedard, S., Krishna, M. M., Lin, Y., and Englander, S. W. (2002) Cytochrome c folding pathway: kinetic native-state hydrogen exchange, Proc. Natl. Acad. Sci. U.S.A. 99, 12173-12178.
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 12173-12178
-
-
Hoang, L.1
Bedard, S.2
Krishna, M.M.3
Lin, Y.4
Englander, S.W.5
-
38
-
-
0037214137
-
Protein hydrogen exchange mechanism: Local fluctuations
-
Maity, H., Lim, W. K., Rumbley, J. N., and Englander, S. W. (2003) Protein hydrogen exchange mechanism: Local fluctuations, Protein Sci. 12, 153-160.
-
(2003)
Protein Sci.
, vol.12
, pp. 153-160
-
-
Maity, H.1
Lim, W.K.2
Rumbley, J.N.3
Englander, S.W.4
-
40
-
-
0037469128
-
Structure and dynamics of reduced Bacillus pasteurii cytochrome c: Oxidation state dependent properties and implications for electron-transfer processes
-
Bartalesi, I., Bertini, I., and Rosato, A. (2003) Structure and dynamics of reduced Bacillus pasteurii cytochrome c: oxidation state dependent properties and implications for electron-transfer processes, Biochemistry 42, 739-745.
-
(2003)
Biochemistry
, vol.42
, pp. 739-745
-
-
Bartalesi, I.1
Bertini, I.2
Rosato, A.3
-
42
-
-
36849127400
-
Nuclear magnetic resonance study of the protolysis of trimethylamminium ion in aqueous solution-order of the reaction with respect to solvent
-
Luz, Z., and Meiboom, S. (1963) Nuclear magnetic resonance study of the protolysis of trimethylamminium ion in aqueous solution-order of the reaction with respect to solvent., J. Chem. Phys. 39, 370.
-
(1963)
J. Chem. Phys.
, vol.39
, pp. 370
-
-
Luz, Z.1
Meiboom, S.2
-
43
-
-
0031912073
-
Determinants of protein hydrogen exchange studied in equine cytochrome c
-
Milne, J. S., Mayne, L., Roder, H., Wand, A. J., and Englander, S. W. (1998) Determinants of protein hydrogen exchange studied in equine cytochrome c, Protein Sci. 7, 739-745.
-
(1998)
Protein Sci.
, vol.7
, pp. 739-745
-
-
Milne, J.S.1
Mayne, L.2
Roder, H.3
Wand, A.J.4
Englander, S.W.5
-
45
-
-
0035933343
-
Snapshots of protein folding. A study on the multiple transition state pathway of cytochrome c(551) from Pseudomonas aeruginosa
-
Gianni, S., Travaglini-Allocatelli, C., Cutruzzolà, F., Bigotti, M. G., and Brunori, M. (2001) Snapshots of protein folding. A study on the multiple transition state pathway of cytochrome c(551) from Pseudomonas aeruginosa, J. Mol. Biol. 309, 1177-1187.
-
(2001)
J. Mol. Biol.
, vol.309
, pp. 1177-1187
-
-
Gianni, S.1
Travaglini-Allocatelli, C.2
Cutruzzolà, F.3
Bigotti, M.G.4
Brunori, M.5
-
46
-
-
0037094108
-
Mapping the cytochrome c folding landscape
-
Lyubovitsky, J. G., Gray, H. B., and Winkler, J. R. (2002) Mapping the cytochrome c folding landscape, J. Am. Chem. Soc. 124, 5481-5485.
-
(2002)
J. Am. Chem. Soc.
, vol.124
, pp. 5481-5485
-
-
Lyubovitsky, J.G.1
Gray, H.B.2
Winkler, J.R.3
-
47
-
-
0029881007
-
MOLMOL: A program for display and analysis of macromolecular structure
-
Koradi, R., Billeter, M., and Wüthrich, K. (1996) MOLMOL: a program for display and analysis of macromolecular structure, J. Mol. Graphics 14, 51-55.
-
(1996)
J. Mol. Graphics
, vol.14
, pp. 51-55
-
-
Koradi, R.1
Billeter, M.2
Wüthrich, K.3
-
48
-
-
0030878055
-
Solution structure of oxidized horse heart cytochrome c
-
Banci, L., Bertini, I., Gray, H. B., Luchinat, C., Reddig, T., Rosato, A., and Turano, P. (1997) Solution structure of oxidized horse heart cytochrome c, Biochemistry 36, 9867-9877.
-
(1997)
Biochemistry
, vol.36
, pp. 9867-9877
-
-
Banci, L.1
Bertini, I.2
Gray, H.B.3
Luchinat, C.4
Reddig, T.5
Rosato, A.6
Turano, P.7
-
49
-
-
0031715982
-
Protein structure alignment by incremental combinatorial extension (CE) of the optimal path
-
Shindyalov, I. N., and Bourne, P. E. (1998) Protein structure alignment by incremental combinatorial extension (CE) of the optimal path, Protein Eng. 11, 739-747.
-
(1998)
Protein Eng.
, vol.11
, pp. 739-747
-
-
Shindyalov, I.N.1
Bourne, P.E.2
|