메뉴 건너뛰기




Volumn 85, Issue 4, 2003, Pages 2525-2538

Dynamic NMR structures of [Rp]- and [Sp]-phosphorothioated DNA-RNA hybrids: Is flexibility required for RNase H recognition?

Author keywords

[No Author keywords available]

Indexed keywords

ANTISENSE OLIGONUCLEOTIDE; DEOXYRIBOSE; DNA; OLIGODEOXYNUCLEOTIDE PHOSPHOROTHIOATE; RIBONUCLEASE H; RNA; SODIUM ION;

EID: 0141530960     PISSN: 00063495     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0006-3495(03)74675-X     Document Type: Article
Times cited : (14)

References (63)
  • 1
    • 0031278019 scopus 로고    scopus 로고
    • Perspectives in antisense therapeutics
    • Agrawal, S., and R. P. Iyer. 1997. Perspectives in antisense therapeutics. Pharmacol. Ther. 76:151-160.
    • (1997) Pharmacol. Ther. , vol.76 , pp. 151-160
    • Agrawal, S.1    Iyer, R.P.2
  • 2
    • 0029791763 scopus 로고    scopus 로고
    • Second-generation antisense oligonucleotides: Structure-activity relationships and the design of improved signal-transduction inhibitors
    • Altmann, K.-H., D. Fabbrot, N. M. Dean, T. Geigert, B. P. Monia, M. Müller, and P. Nicklin. 1997. Second-generation antisense oligonucleotides: structure-activity relationships and the design of improved signal-transduction inhibitors. Biochem. Soc. Trans. 24:630-637.
    • (1997) Biochem. Soc. Trans. , vol.24 , pp. 630-637
    • Altmann, K.-H.1    Fabbrot, D.2    Dean, N.M.3    Geigert, T.4    Monia, B.P.5    Müller, M.6    Nicklin, P.7
  • 3
    • 0034501041 scopus 로고    scopus 로고
    • Conformational dynamics in mixed alpha/beta-oligonucleotides containing polarity reversals: A molecular dynamics study using time-averaged restraints
    • Aramini, J. M., A. Mujeeb, N. B. Ulyanov, and M. W. Germann. 2000. Conformational dynamics in mixed alpha/beta-oligonucleotides containing polarity reversals: a molecular dynamics study using time-averaged restraints. J. Biomol. NMR. 18:287-302.
    • (2000) J. Biomol. NMR , vol.18 , pp. 287-302
    • Aramini, J.M.1    Mujeeb, A.2    Ulyanov, N.B.3    Germann, M.W.4
  • 5
    • 0029022355 scopus 로고
    • Conformational variability of solution nuclear magnetic resonance structures
    • Bonvin, A. M. J. J., and A. T. Brünger. 1995. Conformational variability of solution nuclear magnetic resonance structures. J. Mol. Biol. 250:80-93.
    • (1995) J. Mol. Biol. , vol.250 , pp. 80-93
    • Bonvin, A.M.J.J.1    Brünger, A.T.2
  • 6
    • 0000425457 scopus 로고
    • MARDIGRAS - Procedure for matrix analysis of relaxation for discerning geometry of an aqueous structure
    • Borgias, B. A., and T. L. James. 1990. MARDIGRAS - procedure for matrix analysis of relaxation for discerning geometry of an aqueous structure. J. Magn. Reson. 87:475-487.
    • (1990) J. Magn. Reson. , vol.87 , pp. 475-487
    • Borgias, B.A.1    James, T.L.2
  • 7
    • 0021763144 scopus 로고
    • Complete assignment of the non-exchangeable proton NMR resonances of [d-(GGAATTCC)]2 using two-dimensional nuclear Overhauser effect spectra
    • Broido, M. S., G. Zon, and T. L. James. 1984. Complete assignment of the non-exchangeable proton NMR resonances of [d-(GGAATTCC)]2 using two-dimensional nuclear Overhauser effect spectra. Biochem. Biophys. Res. Commun. 119:663-670.
    • (1984) Biochem. Biophys. Res. Commun. , vol.119 , pp. 663-670
    • Broido, M.S.1    Zon, G.2    James, T.L.3
  • 10
    • 0030000245 scopus 로고    scopus 로고
    • Progress in antisense oligonucleotide therapeutics
    • Crooke, S. T., and C. F. Bennett. 1996. Progress in antisense oligonucleotide therapeutics. Annu. Rev. Pharmacol. Toxicol. 36:107-129.
    • (1996) Annu. Rev. Pharmacol. Toxicol. , vol.36 , pp. 107-129
    • Crooke, S.T.1    Bennett, C.F.2
  • 11
  • 12
    • 0030943935 scopus 로고    scopus 로고
    • Comparative pharmacokinetics, tissue distribution, and tumor accumulation of phosphorothioate, phosphorodithioate, and methylphosphonate oligonucleotides in nude mice
    • DeLong, R. K., A. Nolting, M. Fisher, Q. Chen, E. Wickstrom, M. Kligshteyn, S. Demirdji, M. Caruthers, and R. L. Juliano. 1997. Comparative pharmacokinetics, tissue distribution, and tumor accumulation of phosphorothioate, phosphorodithioate, and methylphosphonate oligonucleotides in nude mice. Antisense Nucleic Acid Drug Dev. 7:71-77.
    • (1997) Antisense Nucleic Acid Drug Dev. , vol.7 , pp. 71-77
    • DeLong, R.K.1    Nolting, A.2    Fisher, M.3    Chen, Q.4    Wickstrom, E.5    Kligshteyn, M.6    Demirdji, S.7    Caruthers, M.8    Juliano, R.L.9
  • 14
    • 0031556022 scopus 로고    scopus 로고
    • Solution structure of r(gaggacug):d(CAGTCCTC) hybrid: Implications for the initiation of HIV-1 (+)-strand synthesis
    • Fedoroff, O. Y., Y. Ge, and B. R. Reid. 1997. Solution structure of r(gaggacug):d(CAGTCCTC) hybrid: implications for the initiation of HIV-1 (+)-strand synthesis. J. Mol. Biol. 269:225-239.
    • (1997) J. Mol. Biol. , vol.269 , pp. 225-239
    • Fedoroff, O.Y.1    Ge, Y.2    Reid, B.R.3
  • 15
    • 0029365350 scopus 로고
    • Structure refinement with molecular dynamics and a Boltzmann-weighted ensemble
    • Fennen, J., A. E. Torda, and W. F. v. Gunsteren. 1995. Structure refinement with molecular dynamics and a Boltzmann-weighted ensemble. J. Biomol. NMR. 6:163-170.
    • (1995) J. Biomol. NMR , vol.6 , pp. 163-170
    • Fennen, J.1    Torda, A.E.2    Gunsteren, W.F.V.3
  • 17
    • 0030727765 scopus 로고    scopus 로고
    • The ups and downs of nucleic acid duplex stability: Structure-stability studies on chemically-modified DNA:RNA duplexes
    • Freier, S. M., and K. H. Altmann. 1997. The ups and downs of nucleic acid duplex stability: structure-stability studies on chemically-modified DNA:RNA duplexes. Nucleic Acids Res. 25:4429-4443.
    • (1997) Nucleic Acids Res. , vol.25 , pp. 4429-4443
    • Freier, S.M.1    Altmann, K.H.2
  • 18
    • 0033613999 scopus 로고    scopus 로고
    • Structural effect of complete Rp phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex
    • Furrer, P., T. M. Billeci, A. Donati, C. Kojima, B. Karwowski, A. Sierzchala, W. Stec, and T. L. James. 1999. Structural effect of complete Rp phosphorothioate and phosphorodithioate substitutions in the DNA strand of a model antisense inhibitor-target RNA complex. J. Mol. Biol. 285:1609-1622.
    • (1999) J. Mol. Biol. , vol.285 , pp. 1609-1622
    • Furrer, P.1    Billeci, T.M.2    Donati, A.3    Kojima, C.4    Karwowski, B.5    Sierzchala, A.6    Stec, W.7    James, T.L.8
  • 19
    • 0003784346 scopus 로고    scopus 로고
    • University of California, San Francisco
    • Goddard, T. D., and D. G. Kneller. 1998. SPARKY 3.0. University of California, San Francisco.
    • (1998) SPARKY 3.0
    • Goddard, T.D.1    Kneller, D.G.2
  • 20
    • 0027990236 scopus 로고
    • Structural study of a DNA-RNA hybrid duplex with a chiral phosphorothioate moiety by NMR: Extraction of distance and torsion angle constraints and imino proton exchange rates
    • Gonzàlez, C., W. Stec, A. Kobylanska, R. Hogrefe, M. Reynolds, and T. L. James. 1994. Structural study of a DNA-RNA hybrid duplex with a chiral phosphorothioate moiety by NMR: extraction of distance and torsion angle constraints and imino proton exchange rates. Biochemistry. 33:11062-11072.
    • (1994) Biochemistry , vol.33 , pp. 11062-11072
    • Gonzàlez, C.1    Stec, W.2    Kobylanska, A.3    Hogrefe, R.4    Reynolds, M.5    James, T.L.6
  • 21
    • 0028921962 scopus 로고
    • Structure and dynamics of a DNA-RNA hybrid duplex with a chiral phosphorothioate moiety. NMR and molecular dynamics with conventional and time-averaged restraints
    • Gonzàlez, C., W. Stec, M. Reynolds, and T. L. James. 1995. Structure and dynamics of a DNA-RNA hybrid duplex with a chiral phosphorothioate moiety. NMR and molecular dynamics with conventional and time-averaged restraints. Biochemistry. 34:4969-4982.
    • (1995) Biochemistry , vol.34 , pp. 4969-4982
    • Gonzàlez, C.1    Stec, W.2    Reynolds, M.3    James, T.L.4
  • 22
    • 0343550557 scopus 로고    scopus 로고
    • Determination of the populations and structures of multiple conformers in an ensemble from NMR data: Multiple-copy refinement of nucleic acid structures using floating weights
    • Görler, A., N. B. Ulyanov, and T. L. James. 2000. Determination of the populations and structures of multiple conformers in an ensemble from NMR data: multiple-copy refinement of nucleic acid structures using floating weights. J. Biomol. NMR. 16:147-164.
    • (2000) J. Biomol. NMR , vol.16 , pp. 147-164
    • Görler, A.1    Ulyanov, N.B.2    James, T.L.3
  • 23
    • 0032488608 scopus 로고    scopus 로고
    • Solution structures of DNA-RNA hybrids with purine-rich and pyrimidine-rich strands: Comparison with the homologous DNA and RNA duplexes
    • Gyi, J. I., A. N. Lane, G. L. Conn, and T. Brown. 1998. Solution structures of DNA-RNA hybrids with purine-rich and pyrimidine-rich strands: comparison with the homologous DNA and RNA duplexes. Biochemistry. 37:73-80.
    • (1998) Biochemistry , vol.37 , pp. 73-80
    • Gyi, J.I.1    Lane, A.N.2    Conn, G.L.3    Brown, T.4
  • 24
    • 0000577528 scopus 로고    scopus 로고
    • Chimera: An extensible molecular modeling application constructed using standard components
    • Huang, C. C., G. S. Couch, E. F. Pettersen, and T. E. Ferrin. 1996. Chimera: an extensible molecular modeling application constructed using standard components. Pac. Symp. Biocomp. 1:724.
    • (1996) Pac. Symp. Biocomp. , vol.1 , pp. 724
    • Huang, C.C.1    Couch, G.S.2    Pettersen, E.F.3    Ferrin, T.E.4
  • 25
    • 0028866812 scopus 로고
    • Solution structure of the CUUG hairpin loop: A novel RNA tetraloop motif
    • Jucker, F. M., and A. Pardi. 1995. Solution structure of the CUUG hairpin loop: a novel RNA tetraloop motif. Biochemistry. 34:14416-14427.
    • (1995) Biochemistry , vol.34 , pp. 14416-14427
    • Jucker, F.M.1    Pardi, A.2
  • 26
    • 0001053688 scopus 로고
    • A theoretical study of distance determinations from NMR. Two-dimensional nuclear Overhauser effect spectra
    • Keepers, J. W., and T. L. James. 1984. A theoretical study of distance determinations from NMR. Two-dimensional nuclear Overhauser effect spectra. J. Magn. Reson. 57:404-426.
    • (1984) J. Magn. Reson. , vol.57 , pp. 404-426
    • Keepers, J.W.1    James, T.L.2
  • 27
    • 0029334378 scopus 로고
    • Dynamic modelling of a helical peptide in solution using NMR data: Multiple conformations and multispin effects
    • Kemmink, J., and R. M. Scheek. 1995. Dynamic modelling of a helical peptide in solution using NMR data: multiple conformations and multispin effects. J. Biomol. NMR. 5:33-40.
    • (1995) J. Biomol. NMR , vol.5 , pp. 33-40
    • Kemmink, J.1    Scheek, R.M.2
  • 29
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: A program for display and analysis of macromolecular structures
    • Koradi, R., M. Billeter, and K. Wüthrich. 1996. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14:29-32.
    • (1996) J. Mol. Graph. , vol.14 , pp. 29-32
    • Koradi, R.1    Billeter, M.2    Wüthrich, K.3
  • 32
    • 0031019342 scopus 로고    scopus 로고
    • Binding affinity and specificity of Escherichia coli RNase H1: Impact on the kinetics of catalysis of antisense oligonucleotide-RNA hybrids
    • Lima, W. F., and S. T. Crooke. 1997. Binding affinity and specificity of Escherichia coli RNase H1: impact on the kinetics of catalysis of antisense oligonucleotide-RNA hybrids. Biochemistry. 36:390-398.
    • (1997) Biochemistry , vol.36 , pp. 390-398
    • Lima, W.F.1    Crooke, S.T.2
  • 33
    • 0029450044 scopus 로고
    • Interproton distance bounds from 2D-NOE intensities: Effect of experimental noise and peak integration errors
    • Liu, H., H. P. Spielmann, N. B. Ulyanov, D. E. Wemmer, and T. L. James. 1995. Interproton distance bounds from 2D-NOE intensities: effect of experimental noise and peak integration errors. J. Biomol. NMR. 6:390-402.
    • (1995) J. Biomol. NMR , vol.6 , pp. 390-402
    • Liu, H.1    Spielmann, H.P.2    Ulyanov, N.B.3    Wemmer, D.E.4    James, T.L.5
  • 34
    • 1642633533 scopus 로고    scopus 로고
    • Toxicological evaluation of oligonucleotide therapeutics
    • Marquis, J. K., and J. M. Grindel. 2000. Toxicological evaluation of oligonucleotide therapeutics. Curr. Opin. Mol. Ther. 2:258-263.
    • (2000) Curr. Opin. Mol. Ther. , vol.2 , pp. 258-263
    • Marquis, J.K.1    Grindel, J.M.2
  • 35
    • 0028804849 scopus 로고
    • The effects of sequence context on base dynamics at TpA steps in DNA studied by NMR
    • McAteer, K., P. D. Ellis, and M. A. Kennedy. 1995. The effects of sequence context on base dynamics at TpA steps in DNA studied by NMR. Nucleic Acids Res. 23:3962-3966.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 3962-3966
    • McAteer, K.1    Ellis, P.D.2    Kennedy, M.A.3
  • 36
    • 0033928295 scopus 로고    scopus 로고
    • NMR evidence for base dynamics at all TpA steps in DNA
    • McAteer, K., and M. A. Kennedy. 2000. NMR evidence for base dynamics at all TpA steps in DNA. J. Biomol. Struct. Dyn. 17:1001-1009.
    • (2000) J. Biomol. Struct. Dyn. , vol.17 , pp. 1001-1009
    • McAteer, K.1    Kennedy, M.A.2
  • 37
    • 0033555551 scopus 로고    scopus 로고
    • Characterization of a potent and specific class of antisense oligonucleotide inhibitor of human protein kinase C-alpha expression
    • McKay, R. A., L. J. Miraglia, L. L. Cummins, S. R. Owens, H. Sasmor, and N. M. Dean. 1999. Characterization of a potent and specific class of antisense oligonucleotide inhibitor of human protein kinase C-alpha expression. J. Biol. Chem. 274:1715-1722.
    • (1999) J. Biol. Chem. , vol.274 , pp. 1715-1722
    • McKay, R.A.1    Miraglia, L.J.2    Cummins, L.L.3    Owens, S.R.4    Sasmor, H.5    Dean, N.M.6
  • 38
    • 0030760355 scopus 로고    scopus 로고
    • First- and second-generation antisense inhibitors targeted to human c-raf kinase: In vitro and in vivo studies
    • Monia, B. P. 1997. First- and second-generation antisense inhibitors targeted to human c-raf kinase: in vitro and in vivo studies. Anticancer Drug Des. 12:327-339.
    • (1997) Anticancer Drug Des. , vol.12 , pp. 327-339
    • Monia, B.P.1
  • 39
    • 0026788541 scopus 로고
    • A potential gene target in HIV-1: Rationale, selection of a conserved sequence, and determination of NMR distance and torsion angle constraints
    • Mujeeb, A., S. M. Kerwin, W. Egan, G. L. Kenyon, and T. L. James. 1992. A potential gene target in HIV-1: rationale, selection of a conserved sequence, and determination of NMR distance and torsion angle constraints. Biochemistry. 31:9325-9338.
    • (1992) Biochemistry , vol.31 , pp. 9325-9338
    • Mujeeb, A.1    Kerwin, S.M.2    Egan, W.3    Kenyon, G.L.4    James, T.L.5
  • 40
    • 0027751258 scopus 로고
    • Solution structure of a conserved DNA sequence from the HIV-1 genome: Restrained molecular dynamics simulation with distance and torsion angle restraints derived from 2D NMR spectra
    • Mujeeb, A., S. M. Kerwin, G. L. Kenyon, and T. L. James. 1993. Solution structure of a conserved DNA sequence from the HIV-1 genome: restrained molecular dynamics simulation with distance and torsion angle restraints derived from 2D NMR spectra. Biochemistry. 32:13419-13431.
    • (1993) Biochemistry , vol.32 , pp. 13419-13431
    • Mujeeb, A.1    Kerwin, S.M.2    Kenyon, G.L.3    James, T.L.4
  • 41
    • 0001843949 scopus 로고    scopus 로고
    • FINGAR: A new genetic algorithm-based method for fitting NMR data
    • Pearlman, D. A. 1996. FINGAR: a new genetic algorithm-based method for fitting NMR data. J. Biomol. NMR. 8:49-66.
    • (1996) J. Biomol. NMR , vol.8 , pp. 49-66
    • Pearlman, D.A.1
  • 42
    • 0025778738 scopus 로고
    • Are time-averaged restraints necessary for NMR refinement? A model study for DNA
    • Pearlman, D. A., and P. A. Kollman. 1991. Are time-averaged restraints necessary for NMR refinement? A model study for DNA. J. Mol. Biol. 220:457-479.
    • (1991) J. Mol. Biol. , vol.220 , pp. 457-479
    • Pearlman, D.A.1    Kollman, P.A.2
  • 43
    • 0023111788 scopus 로고
    • Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: A graphical analysis
    • Rinkel, L. J., and C. Altona. 1987. Conformational analysis of the deoxyribofuranose ring in DNA by means of sums of proton-proton coupling constants: a graphical analysis. J. Biomol. Struct. Dyn. 4:621-649.
    • (1987) J. Biomol. Struct. Dyn. , vol.4 , pp. 621-649
    • Rinkel, L.J.1    Altona, C.2
  • 44
    • 33646940952 scopus 로고
    • Numerical integration of the cartesian equations of motion of a system with constraints: Molecular dynamics of n-alkanes
    • Ryckaert, J. P., G. Cicotti, and H. J. C. Berendsen. 1977. Numerical integration of the cartesian equations of motion of a system with constraints: molecular dynamics of n-alkanes. J. Comput. Phys. 233:327-341.
    • (1977) J. Comput. Phys. , vol.233 , pp. 327-341
    • Ryckaert, J.P.1    Cicotti, G.2    Berendsen, H.J.C.3
  • 46
    • 0032189738 scopus 로고    scopus 로고
    • Small structural ensembles for a 17-nucleotide mimic of the mRNA T psi C-loop via fitting dipolar relaxation rates with the quadratic programming algorithm
    • Schmitz, U., A. Donati, T. L. James, N. B. Ulyanov, and L. Yao. 1998. Small structural ensembles for a 17-nucleotide mimic of the mRNA T psi C-loop via fitting dipolar relaxation rates with the quadratic programming algorithm. Biopolymers. 46:329-342.
    • (1998) Biopolymers , vol.46 , pp. 329-342
    • Schmitz, U.1    Donati, A.2    James, T.L.3    Ulyanov, N.B.4    Yao, L.5
  • 47
    • 0001094253 scopus 로고
    • Dynamic interpretation of NMR structural data: Molecular dynamics with weighted time-averaged restraints and ensemble R-factor
    • Schmitz, U., A. Kumar, and T. L. James. 1992a. Dynamic interpretation of NMR structural data: molecular dynamics with weighted time-averaged restraints and ensemble R-factor. J. Am. Chem. Soc. 114:10654-10656.
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 10654-10656
    • Schmitz, U.1    Kumar, A.2    James, T.L.3
  • 48
    • 0026758712 scopus 로고
    • Solution structure of a DNA octamer containing the Pribnow box via restrained molecular dynamics simulation with distance and torsion angle constraints derived from 2D NMR spectral fitting
    • Schmitz, U., I. Sethson, W. Egan, and T. L. James. 1992b. Solution structure of a DNA octamer containing the Pribnow box via restrained molecular dynamics simulation with distance and torsion angle constraints derived from 2D NMR spectral fitting. J. Mol. Biol. 227:510-531.
    • (1992) J. Mol. Biol. , vol.227 , pp. 510-531
    • Schmitz, U.1    Sethson, I.2    Egan, W.3    James, T.L.4
  • 49
    • 0027432486 scopus 로고
    • Molecular dynamics with weighted time-averaged restraints of a DNA octamer: Dynamic interpretation of NMR data
    • Schmitz, U., N. B. Ulyanov, A. Kumar, and T. L. James. 1993. Molecular dynamics with weighted time-averaged restraints of a DNA octamer: dynamic interpretation of NMR data. J. Mol. Biol. 234:373-389.
    • (1993) J. Mol. Biol. , vol.234 , pp. 373-389
    • Schmitz, U.1    Ulyanov, N.B.2    Kumar, A.3    James, T.L.4
  • 50
    • 0025260868 scopus 로고
    • 2: Evaluation of sugar pucker by simulation of double-quantum-filtered COSY cross-peaks
    • 2: evaluation of sugar pucker by simulation of double-quantum-filtered COSY cross-peaks. Biochemistry. 29:2357-2368.
    • (1990) Biochemistry , vol.29 , pp. 2357-2368
    • Schmitz, U.1    Zon, G.2    James, T.L.3
  • 51
    • 0003023614 scopus 로고
    • MOIL-View - A program for visualization of structure and dynamics of biomolecules and STO - A program for computing stochastic paths
    • A. Pullman, editor. Academic Press, Kluwer, Netherlands
    • Simmerling, C., R. Elber, and J. Zhang. 1995. MOIL-View - a program for visualization of structure and dynamics of biomolecules and STO - a program for computing stochastic paths. In Modeling of Biomolecular Structures and Mechanisms. A. Pullman, editor. Academic Press, Kluwer, Netherlands. 241-65.
    • (1995) Modeling of Biomolecular Structures and Mechanisms , pp. 241-265
    • Simmerling, C.1    Elber, R.2    Zhang, J.3
  • 52
    • 0032578199 scopus 로고    scopus 로고
    • Deoxyribonucleoside 3′-O-(2-Thio- and 2-Oxo-"spiro" -4,4-pentamethylene-1,3,2-oxathiaphospholane)s: Monomers for stereocontrolled synthesis of oligo(deoxyribonucleoside phosphorothioate)s and chimeric PS/PO oligonucleotides
    • Stec, W. J., B. Karwowski, M. Boczkowska, P. Guga, M. Koziokiewicz, M. Sochacki, M. W. Wieczorek, and J. Baszczyk. 1998. Deoxyribonucleoside 3′-O-(2-Thio- and 2-Oxo-"spiro" -4,4-pentamethylene-1,3,2-oxathiaphospholane)s: monomers for stereocontrolled synthesis of oligo(deoxyribonucleoside phosphorothioate)s and chimeric PS/PO oligonucleotides. J. Am. Chem. Soc. 120:7156-7167.
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 7156-7167
    • Stec, W.J.1    Karwowski, B.2    Boczkowska, M.3    Guga, P.4    Koziokiewicz, M.5    Sochacki, M.6    Wieczorek, M.W.7    Baszczyk, J.8
  • 53
    • 0030819086 scopus 로고    scopus 로고
    • Antisense oligonucleotides: A new therapeutic approach
    • Temsamani, J., and P. Gunot. 1997. Antisense oligonucleotides: a new therapeutic approach. Biotechnol. Appl. Biochem. 26:65-71.
    • (1997) Biotechnol. Appl. Biochem. , vol.26 , pp. 65-71
    • Temsamani, J.1    Gunot, P.2
  • 55
    • 0032544177 scopus 로고    scopus 로고
    • Insights into the dynamic nature of DNA duplex structure via analysis of nuclear Overhauser effect intensities
    • Tonelli, M., and T. L. James. 1998. Insights into the dynamic nature of DNA duplex structure via analysis of nuclear Overhauser effect intensities. Biochemistry. 37:11478-11487.
    • (1998) Biochemistry , vol.37 , pp. 11478-11487
    • Tonelli, M.1    James, T.L.2
  • 57
    • 0025367860 scopus 로고
    • Time-average nuclear Overhauser effect distance restraints applied to tendamistat
    • Torda, A. E., R. M. Scheek, and W. F. van Gunsteren. 1990. Time-average nuclear Overhauser effect distance restraints applied to tendamistat. J. Mol. Biol. 214:223-235.
    • (1990) J. Mol. Biol. , vol.214 , pp. 223-235
    • Torda, A.E.1    Scheek, R.M.2    Van Gunsteren, W.F.3
  • 58
    • 0028815252 scopus 로고
    • Probability assessment of conformational ensembles: Sugar repuckering in a DNA duplex in solution
    • Ulyanov, N. B., U. Schmitz, A. Kumar, and T. L. James. 1995. Probability assessment of conformational ensembles: sugar repuckering in a DNA duplex in solution. Biophys. J. 68:13-24.
    • (1995) Biophys. J. , vol.68 , pp. 13-24
    • Ulyanov, N.B.1    Schmitz, U.2    Kumar, A.3    James, T.L.4
  • 59
    • 0026785555 scopus 로고
    • The octamer motif in immunoglobulin genes: Extraction of structural constraints from two-dimensional NMR studies
    • Weisz, K., R. H. Shafer, W. Egan, and T. L. James. 1992. The octamer motif in immunoglobulin genes: extraction of structural constraints from two-dimensional NMR studies. Biochemistry. 31:7477-7487.
    • (1992) Biochemistry , vol.31 , pp. 7477-7487
    • Weisz, K.1    Shafer, R.H.2    Egan, W.3    James, T.L.4
  • 60
    • 0028013525 scopus 로고
    • Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations
    • Weisz, K., R. H. Shafer, W. Egan, and T. L. James. 1994. Solution structure of the octamer motif in immunoglobulin genes via restrained molecular dynamics calculations. Biochemistry. 33:354-366.
    • (1994) Biochemistry , vol.33 , pp. 354-366
    • Weisz, K.1    Shafer, R.H.2    Egan, W.3    James, T.L.4
  • 62
    • 0031113361 scopus 로고    scopus 로고
    • The dynamic NMR structure of the TΨC-loop: Implications for the specificity of tRNA methylation
    • Yao, L. J., T. L. James, J. T. Kealey, D. V. Santi, and U. Schmitz. 1997. The dynamic NMR structure of the TΨC-loop: implications for the specificity of tRNA methylation. J. Biomol. NMR. 9:229-244.
    • (1997) J. Biomol. NMR , vol.9 , pp. 229-244
    • Yao, L.J.1    James, T.L.2    Kealey, J.T.3    Santi, D.V.4    Schmitz, U.5
  • 63
    • 0025800219 scopus 로고
    • Static and statistical bending of DNA evaluated by Monte Carlo simulations
    • Zhurkin, V. B., N. B. Ulyanov, A. A. Gorin, and R. L. Jemigan. 1991. Static and statistical bending of DNA evaluated by Monte Carlo simulations. Proc. Natl. Acad. Sci. USA. 88:7046-7050.
    • (1991) Proc. Natl. Acad. Sci. USA , vol.88 , pp. 7046-7050
    • Zhurkin, V.B.1    Ulyanov, N.B.2    Gorin, A.A.3    Jemigan, R.L.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.