Protein microarrays using liquid phase fractionation of cell lysates

Proteomics

Volumn 3, Issue 7, 2003, Pages 1228-1235

  Yan, Fang ^a   Sreekumar, Arun ^b   Laxman, Bharathi ^b   Chinnaiyan, Arul M ^a,b   Lubman, David M ^a   Barder, Timothy J ^c  

^a UNIVERSITY OF MICHIGAN   (United States)

^b UNIVERSITY OF MICHIGAN MEDICAL SCHOOL   (United States)

^c Eprogen Inc   (United States)

Author keywords

Liquid chromatography; Microarrays; Prostate cancer; Protein

Indexed keywords

ANALYTIC METHOD; CELL LYSATE; CONFERENCE PAPER; FRACTIONATION; HUMAN; HUMAN CELL; LIQUID PHASE FRACTIONATION; MASS SPECTROMETRY; PRIORITY JOURNAL; PROSTATE CANCER; PROTEIN ENGINEERING; PROTEIN MICROARRAY; PROTEIN PROCESSING; REVERSED PHASE HIGH PERFORMANCE LIQUID CHROMATOGRAPHY; SENSITIVITY AND SPECIFICITY;

AUTOMATION; CELL LINE, TUMOR; CHROMATOGRAPHY, HIGH PRESSURE LIQUID; CHROMATOGRAPHY, LIQUID; COLLODION; ELECTROPHORESIS, GEL, TWO-DIMENSIONAL; HUMANS; HYDROGEN-ION CONCENTRATION; MALE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROSTATIC NEOPLASMS; PROTEIN ARRAY ANALYSIS; PROTEIN PROCESSING, POST-TRANSLATIONAL; PROTEINS; SENSITIVITY AND SPECIFICITY; TIME FACTORS; ULTRAVIOLET RAYS;

EID: 0043166912     PISSN: 16159853     EISSN: None     Source Type: Journal    
DOI: 10.1002/pmic.200300443     Document Type: Conference Paper

References (41)

1. Slonim, D. K., Pharmacogenomics 2001, 2, 123-136.
2. Ramaswamy, S., Tamayo, P., Rifkin, R., Mukherjee, S. et al., Proc. Nat. Acad. Sci. USA 2001, 98, 15149-15154.
3. Ross, D. T., Scherf, U., Eisen, M. B., Perou, C. M. et al., Nature Genet. 2000, 24, 227-235.
4. Debouck, C., Goodfellow, P. N., Nature Genet. 1999, 21, 48-50.
5. Haab, B. B., Dunham, M. J., Brown, P. O., Genome Biol. 2001, 2, 1-13.
6. Macbeath, G., Schreiber, S. L., Science 2000, 289, 1760-1763.
7. Cahill, D. J., J. Immunol. Methods 2001, 250, 81-91.
8. Emili, A. Q., Cagney, G., Nature Am. 2000, 18, 393-397.
9. Paweletz, C. P., Charboneau, L., Bichsel, V. E., Simone, N. L. et al., Oncogene 2001, 20, 1981-1989.
10. Sreekumar, A., Nyati, M. K., Varambally, S., Barrette, T. R. et al., Cancer Res. 2001, 61, 7585-7593.
11. Walter, G., Bussow, K., Cahill, D., Lueking, A. et al., Curr. Opin. Microbiol. 2000, 3, 298-302.
12. Zhu, H., Klemic, J. F., Chang, S., Bertone, P. et al., Nature Am. 2000, 26, 283-289.
13. Bussow, K., Cahill, D., Nietfield, W., Bancroft, D. et al., Nucleic Acids Res. 1998, 26, 5007-5008.
14. Madoz-Gurpide, J., Wang, H., Misek, D. E., Brichory, F. et al., Proteomics 2001, 1, 1279-1287.
15. Lueking, A., Horn, M., Eickhoff, H., Bussow, K. et al., Anal. Biochem. 1999, 270, 103-111.
16. Arenkov, P., Kukhtin, A., Gemmell, A., Voloshchuk, S. et al., Anal. Biochem. 2000, 278, 123-131.
17. de Wildt, R. M. T., Mundy, C. R., Gorick, B. D., Tomlinson, I. M., Nature Am. 2000, 18, 989-994.
18. Ge, H., Nucleic Acids Res. 2000, 28, e3.
19. Neusub, C., Pelzing, M., Macht, M., Electrophoresis 2002, 23, 3149-3159.
20. Chong, B. E., Hamler, R. L., Lubman, D. M., Ethier, S. P. et al., Anal. Chem. 2001, 73, 1219-1227.
21. Minamoto, T., Buschmann, T., Habelhah, H., Matusevich, E. et al., Oncogene 2001, 20, 3341-3347.
22. Gottlieb, T. M., Oren, M., Biochim. Biophys. Acta 1996, 1287, 77-102.
23. Kallioniemi, O. P., Wagner, U., Kononen, J., Sauter, G., Hum. Molec. Genet. 2001, 10, 657-662.
24. Wilkens, M. R., Williams, K. L., Appel, R. D., Hochstrasser, D. F. (Eds.), Clinical and Biomedical Applications of Proteomics in Proteome Research: New Frontiers in Functional Genomics, Springer, Berlin 1997, pp. 187-212.
25. Janson, J. C. (Ed.), Protein Purification: Principles, High-Resolution Methods, and Application, 2nd ed., John Wiley & Sons, New York 1998, pp. 149-174.
26. Fountoulakis, M., Langen, H., Gray, C., Takacs, B., J. Chromatogr. A 1998, 806, 279-291.
27. Strong, J. C., Frey, D. D., J. Chromatogr. A 1997, 769, 129-143.
28. Liu, Y., Anderson, D. J., J. Chromatogr. A 1997, 762, 207-217.
29. Chong, B. E., Yan, F., Lubman, D. M., Miller, F. R., Rapid Commun. Mass Spectrom. 2001, 15, 291-296.
30. Itoh, H., Nimura, N., Kiroshita, T., Nagae, N., Nomura, M., Anal. Biochem. 1991, 199, 7-10.
31. Banks, J. F., Gulcicek, E. E., Anal. Chem. 1997, 69, 3973-3978.
32. Barder, T. J., Wohlman, P. J., Thrall, C., DuBols, P. D., LC-GC 1997, 15, 918-926.
33. Hanson, M., Unger, K. K., Mant, C. T., Hodges, R. S., Trends Anal. Chem. 1996, 15, 102-110.
34. Chong, B. E., Lubman, D. M., Miller, F. R., Rosenspire, A. J., Rapid Commun. Mass Spectrom. 1999, 13, 1808-1812.
35. Wall, D. B., Lubman, D. M., Flynn, S. J., Anal. Chem. 1999, 71, 3894-3900.
36. Kawinski, E., Levine, E., Chadha, K., Prostate 2002, 50, 145-153.
37. Minamoto, T., Buschmann, T., Habelhah, H., Matusevich, E. et al., Oncogene 2001, 20, 3341-3347.
38. Horak, E., Smith, K., Bromley, L., LeJeune, S. et al., Oncogene 1991, 6, 2277-2284.
39. Wall, D. B., Kachman, M. T., Gong, S. S., Parus, S. J. et al., Rapid Commun. Mass Spectrom. 2001, 15, 1649-1661.
40. Pratt, R., Vallis, L. M., Lim, C. W., Chisnall, W. N., Pathology 1987, 19, 162-165.
41. Prasannan, L., Misek, D. E., Hinderer, R., Michon, J. et al., Clin. Cancer Res. 2000, 6, 3949-3956.