Differential gene expression analysis of strawberry cultivars that differ in fruit-firmness

Physiologia Plantarum

Volumn 118, Issue 4, 2003, Pages 571-578

  Salentijn, Elma M J ^a   Aharoni, Asaph ^a   Schaart, Jan G ^a   Boone, Marjan J ^a   Krens, Frans A ^a  

^a WAGENINGEN UNIVERSITY   (Netherlands)

Author keywords

[No Author keywords available]

Indexed keywords

CLONING; CROPS; CULTIVATION; DNA; METABOLISM; PLANTS (BOTANY);

CULTIVARS;

GENETIC ENGINEERING;

EMBRYOPHYTA; EUKARYOTA; FRAGARIA X ANANASSA;

EID: 0042068178     PISSN: 00319317     EISSN: None     Source Type: Journal    
DOI: 10.1034/j.1399-3054.2003.00138.x     Document Type: Article

References (43)

1. Abbott JC, Barakate A, Pincon G, Legrand M, Lapierre C, Mila I, Schuch W, Halpin C (2002) Simultaneous suppression of multiple genes by single transgenes. Downregulation of three unrelated lignin biosynthetic genes in tobacco. Plant Physiol 128: 844-853
2. Abeles FB, Takeda F (1990) Cellulase activity and ethylene in ripening strawberry and apple fruits. Sci Hortic 42: 269-275
3. Aharoni A, Keizer LCP, Bouwmeester HJ, Sun Z, Alvarez Huerta M, Verhoeven HA, Blaas J, Houwelingen AV, Vos RCHD, Voet H, vd Jansen RC, Guis M, Mol J, Davis RW, Schena M, Tunen AJV, O'Connell AP (2000) Identification of the SAAT gene involved in strawberry flavor biogenesis by use of DNA microarrays. Plant Cell 12: 647-661
4. Aharoni A, Keizer LCP, Van den Broeck HC, Blanco Portales R, Munoz Blanco J, Bois G, Smit P, De Vos RCH, O'Connell AP (2002) Novel insight into vascular, stress, and auxin-dependent and -independent gene expression programs in strawberry, a non-climacteric fruit. Plant Physiol 129: 1019-1031
5. Aharoni A, O'Connell AP (2002) Gene expression analysis of strawberry achene and receptacle maturation using DNA microarrays. J Exp Bot 53: 2073-2087
6. Aharoni A, Vorst O (2002) DNA microarrays for functional plant genomics. Plant Mol Biol 48: 99-118
7. Barnes MF, Patchett BJ (1976) Cell wall degrading enzymes and the softening of senescent strawberry fruit. J Food Sci 41: 1392-1395
8. Blanco-Portales R, Medina-Escobar N, López-Ráez JA, González-Reyes JA, Villalba JM, Moyano E, Caballero JL, Muños-Blanco J (2002) Cloning, expression and immunolocalization pattern of a cinnamyl alcohol dehydrogenase gene from strawberry (Fragaria x ananassa cv. Chandler). J Exp Bot 53: 1723-1734
9. Brummell DA, Harpster MH (2001) Cell wall metabolism in fruit softening and quality and its manipulation in transgenic plants. Plant Mol Biol 47: 311-340
10. Brummell DA, Harpster MH, Civello PM, Palys JM, Bennett AB, Dunsmuir P (1999) Modification of expansin protein abundance in tomato fruit alters softening and cell wall polymer metabolism during ripening. Plant Cell 11: 2203-2216
11. Chapple C, Carpita N (1998) Plant cell walls as targets for biotechnology. Curr Opin Plant Biol 1: 179-185
12. Civello PM, Powell ALT, Sabehat A, Bennett AB (1999) An expansin gene expressed in ripening strawberry fruit. Plant Physiol 121: 1273-1279
13. Hadfield KA, Bennett AB (1998) Polygalacturonases: many genes in search of a function. Plant Physiol 117: 337-343
14. Halpin C, Knight ME, Foxon GA, Campbell MM, Boudet AM, Boon JJ, Chabbert B, Tollier M-T, Schuch W (1994) Manipulation of lignin quality by downregulation of cinnamyl alcohol dehydrogenase. Plant J 6: 339-350
15. Harpster MH, Brummell DA, Dunsmuir P (1998) Expression analysis of a ripening-specific, auxin-repressed endo-1,4-beta-glucanase gene in strawberry. Plant Physiol 118: 1307-1316
16. Harrison EP, McQueen Mason SJ, Manning K (2001) Expression of six expansin genes in relation to extension activity in developing strawberry fruit. J Exp Bot 52: 1437-1446
17. Hertzberg M, Aspeborg H, Schrader J, Andersson A, Erlandsson R, Blomqvist K, Bhalerao R, Uhlen M, Teeri TT, Lundeberg J, Sundberg B, Nilsson P, Sandberg G (2001) A transcriptional roadmap to wood formation. Proc Natl Acad Sci USA 98: 14732-14737
18. Huber DJ (1984) Strawberry fruit softening: the potential roles of polyuronides and hemicelluloses. J Food Sci 49: 1310-1315
19. Humphreys JM, Chapple C (2002) Rewriting the lignin roadmap. Curr Opin Plant Biol 5: 224-229
20. Jewell GG, Rantsios A, Scholey J (1973) Factors influencing the breakdown of fruit in strawberry jam. J Texture Stud 4: 363-370
21. Jiménéz-Bermudez S, Redondo Nevado J, Munoz Blanco J, Caballero JL, Lopez Aranda JM, Valpuesta V, Pliego Alfaro F, Quesada MA, Mercado JA (2002) Manipulation of strawberry fruit softening by antisense expression of a pectate lyase gene. Plant Physiol 128: 751-775
22. Kroon PA, Williamson G (1999) Hydroxycinnamates in plants and food: Current and future perspectives. J Sci Food Agric 79: 355-361
23. Llop-Tous I, Dominguez Puigjaner E, Palomer X, Vendrell M (1999) Characterization of two divergent endo-beta-1,4-glucanase cDNA clones highly expressed in the nonclimacteric strawberry fruit. Plant Physiol 119: 1415-1421
24. Manning K (1993) Soft fruits. In: Seymour GB, Taylor JE, Tucker GA (eds) Biochemistry of Fruit Ripening. Chapman & Hall, London, pp 347-378, ISBN 0 412 40830 9
25. Manning K (1998a) Genes for fruit quality in strawberry. In: Cockshull KE, Gray D, Seymour GB, Thomas B (eds) Genetic and Environmental Manipulation of Horticultural Crops. CAB International, Wallingford, UK, pp 51-61, ISBN 0-85199-281-1
26. Manning K (1998b) Isolation of a set of ripening-related genes from strawberry: their identification and possible relationship to fruit quality traits. Planta 205: 622-631
27. Markovic O, Jornvall H (1992) Disulfide bridges in tomato pectinesterase: variations from pectinesterases of other species; conservation of possible active site segments. Protein Sci 1: 1288-1292
28. Medina-Escobar N, Cardenas J, Moyano E, caballero JL, Munoz Blanco J (1997) Cloning, molecular characterization and expression pattern of a strawberry ripening-specific cDNA with sequence homology to pectate lyase from higher plants. Plant Mol Biol 34: 867-877
29. Mitchell WC, Jelenkovic G (1995) Characterizing NAD- and NADP-dependent alcohol dehydrogenase enzymes of strawberries. J Am Soc Hortic Sci 120: 798-801
30. Nogata Y, Ohta H, Voragen AGJ (1993) Polygalacturonase in strawberry fruit. Phytochemistry 34: 617-620
31. Rajeevan MS, Vernon SD, Taysavang N, Unger ER (2001) Validation of array-based gene expression profiles by real-time (kinetic) RT-PCR. J Mol Diag 3: 26-31
32. Redondo-Nevado J, Moyano E, Medina Escobar N, Caballero JL, Munoz Blanco J (2001) A fruit-specific and developmentally regulated endopolygalacturonase gene from strawberry (Fragaria x ananassa cv. Chandler). J Exp Bot 52: 1941-1945
33. Rose JKC, Bennett AB (1999) Cooperative disassembly of the cellulose-xyloglucan network of plant cell walls: parallels between cell expansion and fruit ripening. Trends Plant Sci 4: 176-183
34. Ruel K, Chabannes M, Boudet AM, Legrand M, Joseleau J-P (2001) Reassessment of qualitative changes in lignification of transgenic tobacco plants and their impact on cell wall assembly. Phytochemistry 57: 875-882
35. Russell WR, Provan GJ, Burkitt MJ, Chesson A (2000) Extent of incorporation of hydroxycinnamaldehydes into lignin in cinnamyl alcohol dehydrogenase-downregulated plants. J Biotechnol 79: 73-85
36. Schultz DJ, Craig R, Cox Foster DL, Mumma RO, Medford JI, Markovic O, Jornvall H (1994) RNA isolation from recalcitrant plant tissue. Plant Mol Biol Rep 12: 310-316
37. Suutarinen J, Anakainen L, Autio K (1998) Comparison of light microscopy and spatially resolved Fourier transform infrared (FT-IR) microscopy in the examination of cell wall components of strawberries. Food Sci Technol Lebensmittel Wissenschaft Technologie 31: 595-601
38. Tebbutt SJ, Rogers HJ, Lonsdale DM (1994) Characterisation of a tobacco gene encoding a pollen-specific polygalacturonase. Plant Mol Biol 25: 283-297
39. Trainotti L, Ferrarese L, Dalla-Vecchia F, Rascio N, Casadoro G (1999b) Two different endo-beta-1,4-glucanases contribute to the softening of strawberry fruits. Plant Physiol 154: 355-362
40. Trainotti L, Spinello R, Piovan A, Spolaore S, Casadoro G, Schultz DJ, Craig R, Cox Foster DL, Mumma RO, Medford JI (2001) Beta-galactosidases with a lectin-like domain are expressed in strawberry. J Exp Bot 52: 1635-1645
41. Trainotti L, Spolaore S, Pavanello A, Baldan B, Casadoro G (1999a) A novel E-type endo-beta-1,4-glucanase with a putative cellulose-binding domain is highly expressed in ripening strawberry fruits. Plant Mol Biol 40: 323-332
42. Wein M, Lavid N, Lunkenbein S, Lewinsohn E, Schwab W, Kaldenhoff R (2002) Isolation, cloning and expression of a multifunctional O-methyltransferase capable of forming 2,5-dimethyl-4-methoxy-3(2H)-furanone, one of the key aroma compounds in strawberry. Plant J 31: 755-765
43. Woolley L, James D, Kenneth M (2001) Purification and properties of an endo-beta-1,4-glucanase from strawberry and downregulation of the corresponding gene, cell. Planta 214: 11-21