Microsatellite DNA evidence for gene flow in neotropical lek-mating long-tailed Manakins

Condor

Volumn 105, Issue 3, 2003, Pages 580-586

  McDonald, David B ^a  

^a UNIVERSITY OF WYOMING   (United States)

Author keywords

Allelic absence test; Asymmetric gene flow; Genetic distance; Microsatellite; Sexual selection; Speciation

Indexed keywords

AVES; CHIROXIPHIA; CHIROXIPHIA LINEARIS; ROSA;

EID: 0041629068     PISSN: 00105422     EISSN: None     Source Type: Journal    
DOI: 10.1650/7022     Document Type: Article

References (57)

1. ABBOTT, C. L., T PÕLDMAA, S. LOUGHEED, M. CLARKE, AND P. T. BOAG. 2002. Hierarchical analysis of genetic population structure in the Noisy Miner using DNA microsatellite markers. Condor 104:652-656.
2. AVISE, J. C. 2000. Phylogeography: the history and formation of species. Harvard University Press, Cambridge, MA.
3. BEERLI, P., AND J. FELSENSTEIN. 2001. Maximum likelihood estimation of a migration matrix and effective population sizes in n subpopulations by using a coalescent approach. Proceedings of the National Academy of Sciences 98:4563-4568.
4. BEERLI, P., AND J. FELSENSTEIN [ONLINE]. 2002. Migrate download area. 〈http://evolution.genetics. washington.edu/lamarc/migrate.download.html〉 (15 April 2003).
5. BELKHIR, K., P. BORSA, L. CHIKHI, N. RAUFASTE, AND F. BONHOMME [ONLINE]. 2002. GENETIX v.4.04. 〈http://www.univ-montp2.fr/~genetix/genetix/genetix.htm〉 (15 April 2003).
6. BENSCH, S., T. ANDERSSON, AND S. AKESSON. 1999. Morphological and molecular variation across a migratory divide in Willow Warblers, Phylloscopus trochilus. Evolution 53:1925-1935.
7. BOUZAT, J. L., H. H. CHENG, H. A. LEWIN, R. L. WESTEMEIER, J. D. BRAWN, AND K. N. PAIGE. 1998. Genetic evaluation of a demographic bottleneck in the Greater Prairie-Chicken. Conservation Biology 12:836-843.
8. BRUMFIELD, R. T., AND A. P. CAPPARELLA. 1996. Historical diversification of birds in northwestern South America: a molecular perspective on the role of vicariant events. Evolution 50:1607-1624.
9. BRZUSTOWSKI, J. [ONLINE]. 2002. Doh assignment test calculator. 〈http://www2.biology.ualberta.ca/jbrzusto/Doh.php〉 (15 April 2003).
10. CAPPARELLA, A. P. 1991. Neotropical avian diversity and riverine barriers. Proceedings of the International Ornithological Congress 20:307-316.
11. CAVALLI-SFORZA, L. L., AND A. W. F. EDWARDS. 1967. Phylogenetic analysis: models and estimation procedures. American Journal of Human Genetics 19:233-257.
12. CORNUET, J. M. [ONLINE]. 1999. GeneClass 1.0.02. 〈http://www.ensam.inra.fr/URLB/geneclass/geneclass.html〉 (19 March 2003).
13. CRACRAFT, J., AND R. O. PRUM. 1988. Patterns and processes of diversification: speciation and historical congruence in some Neotropical birds. Evolution 42:603-620.
14. EL MOUSADIK, A, AND R. J. PETIT. 1996. High levels of genetic differentiation for allelic richness among populations of the argan tree [Argania spinosa (L.) Skeels]. Theoretical and Applied Genetics 92:832-839.
15. ENDLER, J. A. 1982. Pleistocene forest refuges: fact or fancy?, p. 641-657. In G. T. Prance [ED.], Biological diversification in the tropics. Columbia University Press, New York.
16. FELSENSTEIN, J. [ONLINE]. 1993. PHYLIP 3.5. 〈http://evolution.genetics.washington.edu/phylip.html〉 (19 March 2003).
17. GIBBS, H. L., R. J. DAWSON, AND K. A. HOBSON. 2000. Limited differentiation in microsatellite DNA variation among northern populations of the Yellow Warbler: evidence for male-biased gene flow? Molecular Ecology 9:2137-2147.
18. ST Calc: a collection of computer-programs for calculating estimates of genetic differentiation from microsatellite data and determining their significance. Molecular Ecology 6:881-885.
19. GOUDET, J. [ONLINE]. 2002. FSTAT 2.9.3.2. 〈http://www.unil.ch/izea/softwares/fstat.html〉 (19 March 2003).
20. HAAVIE, J., G.-P. SAETRE, AND T. MOUM. 2000. Discrepancies in population differentiation at microsatellites, mitochondrial DNA and male plumage colour in the Pied Flycatcher - inferring evolutionary processes. Molecular Ecology 9:1137-1148.
21. HANSSON, M. C., S. BENSCH, AND O. BRANNSTROM. 2000. Range expansion and the possibility of an emerging contact zone between two subspecies of Chiffchaff Phylloscopus collybita. Journal of Avian Biology 31:548-558.
22. HARTL, D. L., AND A. G. CLARK. 1989. Principles of poplation genetics. Sinauer Associates, Sunderland, MA.
23. HEDRICK, P. W. 1999. Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution 53:313-318.
24. KALINOWSKI, S. T. 2002. Evolutionary and statistical properties of three genetic distances. Molecular Ecology 11:1263-1273.
25. LANDE, R. 1981. Models of speciation by sexual selection on polygenic traits. Proceedings of the National Academy of Sciences 78:3721-3725.
26. MAYR, E., AND R. J. O'HARA. 1986. The biogeographic evidence supporting the Pleistocene forest refuge hypothesis. Evolution 40:55-67.
27. MCDONALD, D. B. 1989. Cooperation under sexual selection: age-graded changes in a lekking bird. American Naturalist 134:709-730.
28. MCDONALD, D. B. 1993. Demographic consequences of sexual selection in the Long-tailed Manakin. Behavioral Ecology 4:297-309.
29. MCDONALD, D. B., AND W. K. POTTS. 1994. Cooperative display and relatedness among males in a lekmating bird. Science 266:1030-1032.
30. McDONALD, D. B., AND W. K. POTTS. 1997. Microsatellite DNA as a genetic marker at several scales, p. 29-49. In D. Mindell [ED.], Avian molecular evolution and systematics. Academic Press, New York.
31. MCDONALD, D. B., W. K. POTTS, J. W. FITZPATRICK, AND G. E. WOOLFENDEN. 1999. Contrasting genetic structures in sister species of North American scrub-jays. Proceedings of the Royal Society of London Series B 266:1117-1125.
32. MONROE, B. L., JR., AND C. G. SIBLEY. 1993. A world checklist of birds. Yale University Press, New Haven, CT.
33. MUNDY, N. I., C. S. WINCHELL, T, BURR, AND D. S. WOODRUFF. 1997. Microsatellite variation and microevolution in the critically endangered San Clemente Island Loggerhead Shrike (Lanius ludovicianus mearnsi). Proceedings of the Royal Society of London Series B 264:869-875.
34. NEEL, J. V. 1973. "Private" genetic variants and the frequency of mutation among South American Indians. Proceedings of the National Academy of Sciences 70:3311-3315.
35. NEI, M. 1973. Analysis of gene diversity in subdivided populations. Proceedings of the National Academy of Sciences 70:3321-3323.
36. ST obsolete? Conservation Genetics 3:167-173.
37. NIELSEN, R. 1997a. A maximum likelihood approach to population samples of microsatellite alleles. Genetics 146:711-716.
38. NIELSEN, R. [ONLINE]. 1997b. MISAT 1.0. 〈http://www.biom.cornell.edu/Homepages/Rasmus_Nielsen/files. html#MISAT〉 (15 April 2003).
39. OYLER-MCCANCE, S. J., N. W. KAHN, K. P. BURNHAM, C. E. BRAUN, AND T. W. QUINN. 1999. A population genetic comparison of large- and small-bodied sage-grouse in Colorado using microsatellite and mitochondrial DNA markers. Molecular Ecology 8:1457-1465.
40. PAETKAU, D., W. CALVERT, I. STIRLING, AND C. STROBECK. 1995. Microsatellite analysis of population structure in Canadian polar bears. Molecular Ecology 4:347-354.
41. PAETKAU, D., L. P. WAITS, P. L. CLARKSON, L. CRAIGHEAD, AND C. STROBECK. 1997. An empirical evaluation of genetic distance statistics using microsatellite data from bear (Ursidae) populations. Genetics 147:1943-1957.
42. PAINTER, J. N., R. H. CROZIER, A. POIANI, R. J. ROBERTSON, AND M. F. CLARKE. 2000. Complex social organization reflects genetic structure and relatedness in the cooperatively breeding Bell Miner, Manorina melanophrys. Molecular Ecology 9:1339-1347.
43. PARKER, T. A., III, AND J. V. REMSEN JR. 1987. Fifty-two Amazonian bird species new to Bolivia. Bulletin of the British Ornithological Club 107:94-107.
44. PETREN, K., B. R. GRANT, AND P. R. GRANT. 1999. A phylogeny of Darwin's finches based on microsatellite DNA length variation. Proceedings of the Royal Society of London Series B 266:321-329.
45. PIERTNEY, S. B., A. D. C. MACCOLL, P. J. BACON, AND J. F. DALLAS. 1999. Local genetic structure in Red Grouse (Lagopus lagopus scoticus): evidence from microsatellite DNA markers. Molecular Ecology 7:1645-1654.
46. PRITCHARD, J. K. [ONLINE]. 2000. Structure v. 1.0. 〈http://pritch.bsd.uchicago.edu/〉 (19 March 2003).
47. PRITCHARD, J. K., M. STEPHENS, AND P. DONNELLY. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
48. SCRIBNER, K. T., M. R. PETERSEN, R. L. FIELDS, S. L. TALBOT, J. M. PEARCE, AND R. K. CHESSER. 2001. Sex-biased gene flow in Spectacled Eiders (Anatidae): inferences from molecular markers with contrasting modes of inheritance. Evolution 55:2105-2115.
49. SLATKIN, M. 1985. Rare alleles as indicators of gene flow. Evolution 39:53-65.
50. SLATKIN, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139:457-462.
51. TAKEZAKI, N., AND M. NEI. 1996. Genetic distances and reconstruction of phylogenetic trees from microsatellite DNA. Genetics 144:389-399.
52. TARR, C. L., S. CONANT, AND R. C. FLEISCHER. 1998. Founder events and variation at microsatellite loci in an insular passerine bird, the Laysan Finch (Tetespiza cantans). Molecular Ecology 7:719-731.
53. TITTERINGTON, D. M., G. D. MURRAY, L. S. MURRAY, D. J. SPIEGELHALTER, A. M. SKENE, J. D. F. HABBEMA, AND G. J. GELKE. 1981. Comparison of discrimination techniques applied to a complex data set of head injured patients. Journal of the Royal Statistical Society Series A 144:145-175.
54. UY, J. A. C., AND G. BORGIA. 2000. Sexual selection drives rapid divergence in bowerbird display traits. Evolution 54:273-278.
55. WALLACE, A. R. 1853. A narrative of travels on the Amazon and Rio Negro. Reeve and Co., London.
56. WEIR, B. S., AND C. C. COCKERHAM. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38:1358-1370.
57. WEST EBERHARD, M. J. 1983. Sexual selection, social competition and speciation. Quarterly Review of Biology 58:155-183.