Three-dimensional maximum probability atlas of the human brain, with particular reference to the temporal lobe

Human Brain Mapping

Volumn 19, Issue 4, 2003, Pages 224-247

  Hammers, Alexander ^a,c   Allom, Richard ^a   Koepp, Matthias J ^a,c   Free, Samantha L ^b,c   Myers, Ralph ^a   Lemieux, Louis ^b   Mitchell, Tejal N ^b,c   Brooks, David J ^a   Duncan, John S ^b  

^a HAMMERSMITH HOSPITAL   (United Kingdom)

^b UNIVERSITY COLLEGE LONDON   (United Kingdom)

^c EPILEPSY SOCIETY   (United Kingdom)

Author keywords

Anatomy; Atlases; Brain mapping; Computer assisted; Cross sectional; Image processing; Methods; Neuroanatomy

Indexed keywords

ANTERIOR COMMISSURE; ARTICLE; BRAIN; BRAIN COMMISSURE; BRAIN MAPPING; FEMALE; HUMAN; HUMAN EXPERIMENT; IMAGE PROCESSING; MALE; NEUROANATOMY; NORMAL HUMAN; PRIORITY JOURNAL; STEREOTAXIS; TEMPORAL LOBE;

ADULT; ALGORITHMS; BRAIN MAPPING; FEMALE; HUMANS; IMAGE INTERPRETATION, COMPUTER-ASSISTED; MAGNETIC RESONANCE IMAGING; MALE; REFERENCE VALUES; STEREOTAXIC TECHNIQUES; TEMPORAL LOBE;

EID: 0041569918     PISSN: 10659471     EISSN: None     Source Type: Journal    
DOI: 10.1002/hbm.10123     Document Type: Article

References (94)

1. Adair T, Karp P, Stein A, Bajcsy R, Reivich M. (1981): Technical note. Computer assisted analysis of tomographic images of the brain. J Comput Assist Tomogr 5:929-932.
2. Amunts K, Malikovic A, Mohlberg H, Schormann T, Zilles K. (2000): Brodmann's areas 17 and 18 brought into stereotaxic space: where and how variable? Neuroimage 11:66-84.
3. Andrew J, Watkins ES. (1969): A stereotaxic atlas of the human thalamus and adjacent structures. A variability study. Baltimore: Williams & Wilkins.
4. Ashburner J, Friston KJ. (1997): Multimodal image coregistration and partitioning: a unified framework. Neuroimage 6:209-217.
5. Ashburner J, Friston KJ. (1999): Nonlinear spatial normalization using basis functions. Hum Brain Mapp 7:254-266.
6. Ashburner J, Neelin P, Collins DL, Evans A, Friston K. (1997): Incorporating prior knowledge into image registration. Neuroimage 6:344-352.
7. Bajcsy R, Lieberson R, Reivich M. (1983): A computerized system for the elastic matching of deformed radiographic images to idealised atlas images. J Comput Assist Tomogr 7:618-625.
8. Bergin PS, Raymond AA, Free SL, Sisodiya SM, Stevens JM. (1994): Magnetic resonance volumetry. Neurology 44:1770-1771.
9. Bohm C, Greitz T, Kingsley D, Berggren BM, Olsson L. (1983): Adjustable computerized stereotaxic brain atlas for transmission and emission tomography. AJNR Am J Neuroradiol 4:731-733.
10. Brierley JB, Beck E. (1959): The significance in human stereotactic brain surgery of individual variation in the diencephalon and globus pallidus. J Neurol Neurosurg Psychiatr 22:287-298.
11. Chiavaras MM, LeGoualher G, Evans A, Petrides M. (2001): Three-dimensional probabilistic atlas of the human orbitofrontal sulci in standardized stereotaxic space. Neuroimage 13:479-496.
12. Collins DL, Zijdenbos AP, Baaré WFC, Evans AC. (1999): ANIMAL+INSECT: Improved cortical structure segmentation. LNCS 1613:210-223.
13. Crespo-Facorro B, Kim J-J, Andreasen NC, Spinks R, O'Leary D, Bockolt HJ, et al. (2000): Cerebral cortex: a topographic segmentation method using magnetic resonance imaging. Psychiatry Res 100:97-126.
14. Dann R, Hoford J, Kovacic S, Reivich M, Bajcsy R. (1989): Evaluation of elastic matching system for anatomic (CT, MR) and functional (PET) cerebral images. J Comput Assist Tomogr 13:603-611.
15. Duncan J, Seitz RJ, Kolodny J, Bor D, Herzog H, Ahmed A, et al. (2000): A neural basis for general intelligence. Science 289:457-460.
16. Duncan JS, Fish DR. (1998): Integration of structural and functional data. Curr Opin Neurol 11:119-122.
17. Duvernoy HM. (1991): The human brain. Surface, three-dimensional sectional anatomy, and MRI. New York: Springer Verlag.
18. Duvernoy HM. (1998): The human hippocampus. Functional anatomy, vascularization and serial sections with MRI. New York: Springer.
19. Duvernoy HM. (1999): The human brain. Surface, blood supply, and three-dimensional sectional anatomy. New York: Springer.
20. Evans AC, Beil C, Marrett S, Thompson CJ, Hakim A. (1988): Anatomical-functional correlation using an adjustable MRI-based region of interest atlas with positron emission tomography. J Cereb Blood Flow Metab 8:513-530.
21. Evans AC, Collins DL, Milner B. (1992): An MRI-based stereotactic brain atlas from 300 young normal subjects. Proc 22nd Annu Symp Soc Neurosci 1992:408.
22. Evans AC, Kamber M, Collins DL, MacDonald D. (1994): An MRI-based probabilistic atlas of neuroanatomy. In: Shorvon SD, Fish DR, Andermann F, Bydder GM, Stefan H, editors. Magnetic resonance scanning and epilepsy. New York: Plenum Press. p 263-274.
23. Evans AC, Marett S, Torrescorzo J, Ku S, Collins L. (1991): MRI-PET correlation in three dimensions using a volume-of-interest (VOI) atlas. J Cereb Blood Flow Metab 11:A69-A78.
24. Filimonoff IN. (1932): Über die Variabilität der Grosshirnrinden-struktur. Mitteilung II. Regio occipitalis beim erwachsenen Menschen. J Psychol Neurol 44:1-96.
25. Fischl B, Sereno MI, Tootell RBH, Dale AM. (1999): High-resolution inter-subject averaging and a coordinate system for the cortical surface. Hum Brain Mapp 8:272-284.
26. Fox PT, Huang A, Parsons LM, Xiong JH, Zamarippa F, Rainey L, et al. (2001): Location-probability profiles for the mouth region of human primary motor-sensory cortex: model and validation. Neuroimage 13:196-209.
27. Free SL, O'Higgins P, Maudgil DD, Dryden IL, Lemieux L, Fish DR, et al. (2001): Landmark-based morphometrics of the normal adult brain using MRI. Neuroimage 13:801-813.
28. Gee JC, Reivich M, Bajcsy R. (1993): Elastically deforming 3D atlas to match anatomical brain images. J Comput Assist Tomogr 17:225-236.
29. Geschwind N, Galaburda AM. (1985): Cerebral lateralization. Biological mechanisms, associations, and pathology: I. A hypothesis and a program for research. Arch Neurol 42:428-459.
30. Geyer S, Schleicher A, Zilles K. (1999): Areas 3a, 3b, and 1 of human primary somatosensory cortex. 1. Microstructural organization and interindividual variability. Neuroimage 10:63-83.
31. Geyer S, Schormann T, Mohlberg H, Zilles K. (2000): Areas 3a, 3b, and 1 of human primary somatosensory cortex. 2. Spatial normalization to standard anatomical space. Neuroimage 11:684-696.
32. Good CD, Johnsrude I, Ashburner J, Henson RNA, Friston KJ, Frackowiack RSJ. (2001): Cerebral asymmetry and the effects of sex and handedness on brain structure: a voxel-based morphometric analysis of 465 normal adult human brains. Neuroimage 14:685-700.
33. Grefkes C, Geyer S, Schormann T, Roland P, Zilles K. (2001): Human somatosensory area 2: ovserver-independent cytoarchitectonic mapping, interindividual variability, and population map. Neuroimage 14:617-631.
34. Greitz T, Bohm C, Holte S, Eriksson L. (1991): A computerized brain atlas: Construction, anatomical content, and some applications. J Comput Assist Tomogr 15:26-38.
35. Hammers A, Koepp MJ, Free SL, Brett M, Richardson MP, Labbé C, et al. (2002): Implementation and application of a brain template for multiple volumes of interest. Hum Brain Mapp 15:165-174.
36. Jackson GD, Duncan JS. (1996): MRI neuroanatomy: A new angle on the brain. London: Churchill Livingstone.
37. Kahle W. (1986): Nervensysteme und Sinnesorgane, Vol 3. New York: Georg Thieme Verlag.
38. Kennedy DN, Lnage N, Makris N, Bates J, Meyer J, Caviness VSJ. (1998): Gyri of the human neocortex: an MRI-based analysis of volume and variance. Cereb Cortex 8:372-384.
39. Kiebel SJ, Ashburner J, Poline JB, Friston KJ. (1997): MRI and PET coregistration: a cross validation of statistical parametric mapping and automated image registration. Neuroimage 5:271-279.
40. Kim JJ, Crespo-Facorro B, Andreasen NC, O'Leary DS, Zhang B, Harris G, et al. (2000): An MRI-based parcellation method for the temporal lobe. Neuroimage 11:271-288.
41. Labbé C, Koepp MJ, Ashburner J, Spinks TJ, Richardson MP, Duncan JS, et al. Absolute PET quantification with correction for partial volume effects within cerebral structures. In: Carson C, Daube-Witherspoon M, Herscovitch P, editors. Quantitative functional brain imaging with positron emission tomography. San Diego: Academic Press. p 59-66.
42. Lange N, Gjedd JN, Castellanos FX, Vaituzis AC, Rapoport JL. (1997): Variability of human brain structure size: ages 4-20 years. Psychiatry Res 74:1-12.
43. Lemieux L, Hammers A, MacKinnon T, Liu RS. (2003): Automatic segmentation of the brain and intracranial cerebrospinal fluid in T1-weighted volume MRI scans of the head, and its application to serial cerebral and intracranial volumetry. Magn Reson Med 49:872-884.
44. 1-weighted volume MRI data. Magn Reson Med 42:127-135.
45. Lohmann G, Yves von Cramon D, Steinmetz H. (1999): Sulcal variability of twins. Cerebral Cortex 9:754-763.
46. Lorente de Nó R. (1934): Studies on the structure of the cerebral cortex. II: Continuation of the study of the Ammonic system. J Psychol Neurol 46:113-177.
47. Maes F, Collignon A, Vandermeulen D, Marchal G, Suetens P. (1997): Multimodality image registration by maximazation of mutual information. IEEE Trans Med Imag 16:187-198.
48. Mai JK, Assheuer J, Paxinos G. (1997): Atlas of the human brain. Boston: Academic Press.
49. Mazziotta JC, Toga AW, Evans AC, Fox P, Lancaster J. (1995): A probabilistic atlas of the human brain: Theory and rationale for its development. Neuroimage 2:89-101.
50. Mazziotta J, Toga A, Evans A, Fox P, Lancaster J, Zilles K, et al. (2001): A probabilistic atlas and reference system for the human brain: International Consortium for Brain Mapping (ICBM). Phil Trans R Soc Lond B Biol Sci 356:1293-1322.
51. Meyer JH, Gunn RN, Myers R, Grasby PM. (1999): Assessment of spatial normalization of PET ligand images using ligand-specific templates. Neuroimage 9:545-553.
52. Miller MI, Christensen GE, Amit Y, Grenander U. (1993): Mathematical textbook of deformable neuroanatomies. Proc Natl Acad Sci U S A 90:11944-11948.
53. Moran NF, Lemieux L, Maudgil D, Kitchen ND, Fish DR, Shorvon SD. (1999): Analysis of temporal lobe resections in MR images. Epilepsia 40:1077-1084.
54. Morosan P, Rademacher J, Schleicher A, Amunts K, Schormann T, Zilles K. (2001): Human primary auditory cortex: cytoarchitectonic subdivisions and mapping into a spatial reference system. Neuroimage 13:684-701.
55. Niemann K, van Nieuwenhofen I. (1999): One atlas, three anatomies: relationships of the Schaltenbrand and Wahren microscopic data. Acta Neurochir (Wien) 141:1025-1038.
56. Niemann K, Hammers A, Coenen VA, Thron A, Klosterkötter J. (2000a): Evidence for smaller left hippocampus and left temporal horn in both patients with first episode schizophrenia and normal controls. Psychiatry Res Neuroimaging 99:93-110.
57. Niemann K, Mennicken VR, Jeanmonod D, Morel A. (2000b): The Morel stereotactic atlas of the human thalamus: Atlas-to-MR registration of internally consistent canonical model. Neuroimage 12:601-616.
58. Nieuwenhuys R, Voogd J, van Huijzen C. (1988): The human central nervous system. A synopsis and atlas. New York: Springer-Verlag.
59. Ono M, Kubik S, Abernathey CD. (1990): Atlas of the cerebral sulci. New York: Georg Thieme Verlag.
60. Paus T, Otaky N, Caramanos Z, MacDonald D, Zijdenbos A, D'Avirro D, et al. (1996): In vivo morphometry of the intrasulcal gray matter in the human cingulate, paracingulate and superior rostral sulci: hemispheric asymmetries, gender differences and probability maps. J Comp Neurol 376:664-673.
61. Penhune VB, Zatorre RJ, MacDonald JD, Evans AC. (1996): Interhemispheric anatomical differences in human primary auditory cortex: Probabilistic mapping and volume measurement from MR scans. Cerebral Cortex 6:617-672.
62. Rademacher J, Caviness VS, Steinmetz H, Galaburda AM. (1993): Topographical variation of the human primary cortices: implications for neuroimaging, brain mapping and neurobiology. Cerebral Cortex 3:313-329.
63. Rademacher J, Burgerl U, Geyer S, Schormann T, Schleicher A, Freund HJ, et al. (2001a): Variability and asymmetry in the human precentral motor system: a cytoarchitectonic and myeloarchitectonic brain mapping study. Brain 124:2232-2258.
64. Rademacher J, Morosan P, Schormann T, Schleicher A, Werner C, Freund HJ, et al. (2001b): Probabilistic mapping and volume measurement of human primary auditory cortex. Neuroimage 13:669-683.
65. Ramón y Cajal S. (1929): Etudes sur la neurogenèse de quelques vertébrés: recueil de mes principales recherches concernant la genèse des nerfs, la morphologie et la structure neuronale, l'origine de la névroglie, les terminaisons nerveuses sensorielles, etc. Madrid: Tipografía Artística.
66. Rizzo G, Scifo P, Gilardi MC, Bettinardi V, Grassi F, Cerutti S, et al. (1997): Matching a computerized brain atlas to multimodal medical images. Neuroimage 6:59-69.
67. Robb RA, Hanson DP. (1991): A software system for interactive and quantitative visualization of multidimensional biomedical images. Australas Phys Eng Sci Med 14:9-30.
68. Roberts M, Hanaway J. (1970): Atlas of the human brain in section. Philadelphia: Lea and Feibiger.
69. Rousset OG, Ma Y, Marenco S, Wong DF, Evans AC. (1995): In vivo correction for partial volume effects in PET: accuracy and precision. Neuroimage 2:S33.
70. Sandor S, Leahy R. (1997): Surface-based labeling of cortical anatomy using a deformable atlas. IEEE Trans Med Imaging 16:41-54.
71. Schaltenbrand G, Wahren W. (1977): Atlas for stereotaxy of the human brain. Chicago: Year Book Medical Publishers.
72. Seitz RJ, Bohm C, Greitz T, Roland PE, Eriksson L, Blomqvist G, et al. (1990): Accuracy and precision of the computerized brain atlas programme for localization and quantification in positron emission tomography. J Cereb Blood Flow Metab 10:443-457.
73. Sisodiya SM, Free SL, Williamson KA, Mitchell TN, Willis C, Stevens JM, et al. (2001): PAX6 haploinsufficiency causes cerebral malformation and olfactory dysfunction in humans. Nat Genet 28:214-216.
74. Sled JG, Zijdenbos AP, Evans AC. (1998): A nonparametric method for automatic correction of intensity nonuniformity in MRI data. IEEE Trans Med Imag 17:87-97.
75. Steinmetz H, Furst G, Freund HJ. (1990): Variation of perisylvian and calcarine anatomic landmarks within stereotactic proportional coordinates. AJNR Am J Neuroradiol 11:1123-1130.
76. Stephan H, Baron G, Frahm HD. (1988): Comparative size of brains and brain components. In: Steklis HD, Erwin J, editors. Neurosciences, Vol 4. New York: Alan R. Liss, Inc. p 1-38.
77. Studholme C, Hill DLG, Hawkes DJ. (1997): Automated three-dimensional registration of magnetic resonance and positron emission tomography brain images by multiresolution optimization of voxel similarity measures. Med Phys 24:25-35.
78. Talairach J, Tournoux P. (1988): Co-planar stereotaxic atlas of the human brain. New York: Georg Thieme Verlag.
79. Talairach J, Szikla G, Tournoux P, Prossalentis A, Bornas-Ferrier M. (1967): Atlas d'anatomie stéréotaxique du télencéphale. Etudes anatomo-radiologiques. Paris: Masson.
80. Thompson PM, Schwartz C, Lin RT, Khan AA, Toga AW. (1996): Three-dimensional statistical analysis of sulcal variability in the human brain. J Neurosci 16:4261-4274.
81. Thompson PM, MacDonald D, Mega MS, Holmes CJ, Evans AC, Toga AW. (1997): Detection and mapping of abnormal brain structure with a probabilistic atlas of cortical surfaces. J Comput Assist Tomogr 4:567-581.
82. Thompson PM, Mega MS, Woods RP, Zoumalan CI, Lindshield CJ, Blanton RE, et al. (2001): Cortical change in Alzheimer's disease detected with a disease-specific population-based brain atlas. Cereb Cortex 11:1-16.
83. Tomaioulo F, MacDonald JD, Caramanos Z, Posner G, Chiavaras M, Evans AC, et al. (1999): Morphology, morphometry and probability mapping of the pars opercularis of the inferior frontal gyrus: an in vivo MRI analysis. Eur J Neurosci 11:3033-3046.
84. Tzourio-Mazoyer N, Landeau B, Papathanassiou D, Crivello F, Etard O, Delcroix N, et al. (2002): Automated anatomical labeling of activations in SPM using a macroscopic anatomical parcellation of the MNI MRI single-subject brain. Neuroimage 15:273-289.
85. Van Buren J, Maccubbin D. (1962): An outline atlas of the human basal ganglia with estimation of anatomical variants. J Neurosurg 19:811-839.
86. van den Elsen PA, Pol E-JD, Viergever MA. (1993): Medical image matching: a review with classification. IEEE Eng Med Biol 12:26-39.
87. Van Essen DC, Drury HA. (1997): Structural and functional analyses of human cerebral cortex using a surface-based atlas. J Neurosci 17:7079-7102.
88. Van Essen DC, Lewis JW, Drury HA, Hadjikhani N, Tootell RB, Bakircioglu M, et al. (2001): Mapping visual cortex in monkeys and humans using surface-based atlases. Vision Res 41:1359-1378.
89. Vesalius A. (1543): De humani corporis fabrica libri septem. Basilea: Ex officina I. Oporini.
90. Watkins KE, Paus T, Lerch JP, Zijdenbos A, Collins DL, Neelin P, et al. (2001): Structural asymmetries in the human brain: a voxel-based statistical analysis of 142 MRI scans. Cereb Cortex 11:868-877.
91. Westbury CF, Zatorre RJ, Evans AC. (1999): Quantifying variability in the planum temporale: a probability map. Cereb Cortex 9:392-405.
92. Woods RP, Mazziotta JC, Cherry SR. (1993): MRI-PET registration with automated algorithm. J Comp Assist Tomogr 17:536-546.
93. Yousry TA, Schmid UD, Alkadhi H, Schmidt D, Peraud A, Buettner A, et al. (1997): Localization of the motor hand area to a knob on the precentral gyrus. A new landmark. Brain 120:141-157.
94. Zilles K, Schleicher A, Langemann C, Amunts K, Morosan P, Palomero-Gallagher N, et al. (1997): Quantitative analysis of sulci in the human cerebral cortex: development, regional heterogeneity, gender difference, asymmetry, inter-subject variability and cortical architecture. Hum Brain Mapp 5:218-221.