Can energy landscape roughness of proteins and RNA be measured by using mechanical unfolding experiments?

Proceedings of the National Academy of Sciences of the United States of America

Volumn 100, Issue 18, 2003, Pages 10249-10253

  Hyeon, Changbong ^a   Thirumalai, D ^a  

^a UNIVERSITY OF MARYLAND   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTEIN; RNA;

ARTICLE; ENERGY; LOW TEMPERATURE; MATHEMATICAL ANALYSIS; MECHANICS; PRIORITY JOURNAL; PROTEIN FOLDING; TEMPERATURE DEPENDENCE;

PROTEIN FOLDING; PROTEINS; RNA; TEMPERATURE; THERMODYNAMICS;

EID: 0041335634     PISSN: 00278424     EISSN: None     Source Type: Journal    
DOI: 10.1073/pnas.1833310100     Document Type: Article

References (23)

1. Bryngelson, J. D., Onuchic, J. N., Socci, N. D. & Wolynes, P. G. (1995) Protein Struct. Funct. Genet. 21, 167-195.
2. Thirumalai, D. & Woodson, S. A. (1996) Acc. Chem. Res. 29, 433-439.
3. Dill, K. A. & Chan, H. S. (1997) Nat. Struct. Biol. 4, 10-19.
4. Jackson, S. E. (1998) Folding Des. 3, R81-R91.
5. Lapidus, L. J., Eaton, W. A. & Hofrichter, J. (2000) Proc. Natl. Acad. Sci. USA 97, 7220-7225.
6. Kellermeyer, M. Z., Smith, S. B., Granzier, H. L. & Bustamante, C. (1997) Science 276, 1112-1116.
7. Tskhovrebova, L., Trinick, J., Sleep, J. A. & Simmons, R. M. (1997) Nature 387, 308-312.
8. Reif, M., Gautel, H., Oesterhelt, F., Fernandez, J. M. & Gaub, H. E. (1999) Science 276, 1109-1112.
9. Isralewitz, B., Gao, M. & Schulten, K. (2001) Curr. Opin. Struct. Biol. 11, 224-230.
10. Zhuang, X. & Reif, M. (2003) Curr. Opin. Struct. Biol. 13, 86-97.
11. Liphardt, J., Onoa, B., Smith, S. B., Tinoco, I. & Bustamante, C. (2001) Science 292, 733-737.
12. Liphardt, J., Dumont, S., Smith, S. B., Tinoco, I. & Bustamante, C. (2002) Science 296, 1832-1835.
13. Onoa, B., Dumont, S., Liphardt, J., Smith, S. B., Tinoco, I. & Bustamante, C. (2003) Science 299, 1892-1895.
14. Hummer, G. & Szabo, A. (2001) Proc. Natl. Acad. Sci. USA 98, 3658-3661.
15. Klimov, D. K. & Thirumalai, D. (2000) Proc. Natl. Acad. Sci. USA 97, 7254-7259.
16. Klimov, D. K. & Thirumalai, D. (2001) J. Phys. Chem. B 105, 6648-6654.
17. Nymeyer, H., Socci, N. D. & Onuchic, J. N. (2000) Proc. Natl. Acad. Sci. USA 97, 634-639.
18. Zwanzig, R. (1988) Proc. Natl. Acad. Sci. USA 85, 2029-2030.
19. Lifson, S. & Jackson, J. L. (1962) J. Chem. Phys. 36, 2410-2414.
20. Hanggi, P., Talkner, P. & Borkovec, M. (1990) Rev. Mod. Phys. 62, 251-341.
21. Evans, E. & Ritchie, K. (1997) Biophys. J. 72, 1541-1555.
22. Rossky, P. J., Doll, J. D. & Friedman, H. L. (1978) J. Chem. Phys. 69, 4628-4633.
23. Lide, D. R. (1995) Handbook of Chemistry and Physics (CRC Press, Boca Raton, FL), 76th Ed.