PlmA, a new member of the GntR family, has plasmid maintenance functions in Anabaena sp. strain PCC 7120

Journal of Bacteriology

Volumn 185, Issue 15, 2003, Pages 4315-4325

  Lee, Martin H ^a   Scherer, Michael ^a,c   Rigali, Sébastien ^b   Golden, James W ^a  

^a TEXAS A AND M UNIVERSITY   (United States)

^b UNIVERSITY OF LIÈGE   (Belgium)

^c US ARMY INSTITUTE OF SURGICAL RESEARCH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

TRANSCRIPTION FACTOR;

ANABAENA; ARTICLE; BACTERIAL GENOME; BACTERIAL STRAIN; CHROMOSOME; CYANOBACTERIUM; MUTATION; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PHYLOGENY; PLASMID; PRIORITY JOURNAL; WILD TYPE;

ANABAENA; BACTERIAL PROTEINS; CULTURE MEDIA; DNA-BINDING PROTEINS; ESCHERICHIA COLI PROTEINS; GENE DOSAGE; GENE EXPRESSION REGULATION, BACTERIAL; GENES, BACTERIAL; GLUTAMATE-AMMONIA LIGASE; MUTATION; PHYLOGENY; PLASMIDS; POLYMERASE CHAIN REACTION; REPRESSOR PROTEINS; TRANSCRIPTION FACTORS;

ANABAENA; ANABAENA SP.; BACTERIA (MICROORGANISMS); CYANOBACTERIA; NEGIBACTERIA; NOSTOC; PROKARYOTA;

EID: 0041313851     PISSN: 00219193     EISSN: None     Source Type: Journal    
DOI: 10.1128/JB.185.15.4315-4325.2003     Document Type: Article

References (53)

1. Adams, D. G. 2000. Symbiotic interactions, p. 523-561. In B. A. Whitton and M. Potts (ed.), The ecology of cyanobacteria. Kluwer Academic Publishers, Dordrecht, The Netherlands.
2. Altschul, S. F., W. Gish, W. Miller, E. W. Myers, and D. J. Lipman. 1990. Basic local alignment search tool. J. Mol. Biol. 215:403-410.
3. Ausubel, F. M., R. Brent, R. E. Kingston, D. D. Moore, J. G. Seidman, J. A. Smith, and K. Struhl. 1987. Current protocols in molecular biology. Greene Publishing Associates and Wiley-Interscience, New York, N.Y.
4. Bateman, A., E. Birney, L. Cerruti, R. Durbin, L. Etwiller, S. R. Eddy, S. Griffiths-Jones, K. L. Howe, M. Marshall, and E. L. Sonnhammer. 2002. The Pfam protein families database. Nucleic Acids Res. 30:276-280.
5. Black, T. A., Y. Cai, and C. P. Wolk. 1993. Spatial expression and autoregulation of hetR, a gene involved in the control of heterocyst development in Anabaena. Mol. Microbiol. 9:77-84.
6. Brasier, M. D., O. R. Green, A. P. Jephcoat, A. K. Kleppe, M. J. Van Kranendonk, J. F. Lindsay, A. Steele, and N. V. Grassineau. 2002. Questioning the evidence for Earth's oldest fossils. Nature 416:76-81.
7. Buikema, W. J., and R. Haselkorn. 1991. Characterization of a gene controlling heterocyst differentiation in the cyanobacterium Anabaena 7120. Genes Dev. 5:321-330.
8. Buikema, W. J., and R. Haselkorn. 2001. Expression of the Anabaena hetR gene from a copper-regulated promoter leads to heterocyst differentiation under repressing conditions. Proc. Natl. Acad. Sci. USA 98:2729-2734.
9. Callahan, S. M., and W. J. Buikema. 2001. The role of HetN in maintenance of the heterocyst pattern in Anabaena sp. PCC 7120. Mol. Microbiol. 40:941-950.
10. Cao, G. J., and N. Sarkar. 1992. Identification of the gene for an Escherichia coli poly(A) polymerase. Proc. Natl. Acad. Sci. USA 89:10380-10384.
11. Castenholz, R. W. 2001. Phylum BX. Cyanobacteria, p: 473-487. In D. R. Boone and R. W. Castenholz (ed.), Bergey's manual of systematic bacteriology, 2nd ed., vol. 1. Springer, New York, N.Y.
12. Cormack, B. P., R. H. Valdivia, and S. Falkow. 1996. FACS-optimized mutants of the green fluorescent protein (GFP). Gene 173:33-38.
13. Craig, I. W., C. K. Leach, and N. G. Carr. 1969. Studies with deoxyribonucleic acid from blue-green algae. Arch. Mikrobiol. 65:218-227.
14. Del Solar, G., A. M. Hernandez-Arriaga, F. X. Gomis-Ruth, M. Coll, and M. Espinosa. 2002. A genetically economical family of plasmid-encoded transcriptional repressors involved in control of plasmid copy number. J. Bacteriol. 184:4943-4951.
15. Elhai, J. 1993. Strong and regulated promoters in the cyanobacterium Anabaena PCC 7120. FEMS Microbiol. Lett. 114:179-184.
16. Elhai, J., A. Vepritskiy, A. M. Muro-Pastor, E. Flores, and C. P. Wolk. 1997. Reduction of conjugal transfer efficiency by three restriction activities of Anabaena sp. strain PCC 7120. J. Bacteriol. 179:1998-2005.
17. Elhai, J., and C. P. Wolk. 1990. Developmental regulation and spatial pattern of expression of the structural genes for nitrogenase in the cyanobacterium Anabaena. EMBO J. 9:3379-3388.
18. Ernst, A., T. Black, Y. Cai, J. M. Panoff, D. N. Tiwari, and C. P. Wolk. 1992. Synthesis of nitrogenase in mutants of the cyanobacterium Anabaena sp. strain PCC 7120 affected in heterocyst development or metabolism. J. Bacteriol. 174:6025-6032.
19. Figurski, D. H., and D. R. Helinski. 1979. Replication of an origin-containing derivative of plasmid RK2 dependent on a plasmid function provided in trans. Proc. Natl. Acad. Sci. USA 76:1648-1652.
20. Golden, J. W., L. L. Whorff, and D. R. Wiest. 1991. Independent regulation of nifHDK operon transcription and DNA rearrangement during heterocyst differentiation in the cyanobacterium Anabaena sp. strain PCC 7120. J. Bacteriol. 173:7098-7105.
21. Haselkorn, R. 1992. Developmentally regulated gene rearrangements in prokaryotes. Annu. Rev. Genet. 26:113-130.
22. Haydon, D. J., and J. R. Guest. 1991. A new family of bacterial regulatory proteins. FEMS Microbiol. Lett. 63:291-295.
23. He, L., F. Soderbom, E. G. Wagner, U. Binnie, N. Binns, and M. Masters. 1993. PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColEl-related plasmids. Mol. Microbiol. 9:1131-1142.
24. Herdman, M., M. Janvier, R. Rippka, and R. Y. Stanier. 1979. Genome size of cyanobacteria. J. Gen. Microbiol. 111:73-85.
25. Jones, K. M., and R. Haselkorn. 2002. Newly identified cytochrome c oxidase operon in the nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120 specifically induced in heterocysts. J. Bacteriol. 184:2491-2499.
26. Kaneko, T., T. Matsubayashi, M. Sugita, and M. Sugiura. 1996. Physical and gene maps of the unicellular cyanobacterium Synechococcus sp. strain PCC6301 genome. Plant Mol. Biol. 31:193-201.
27. Kaneko, T., Y. Nakamura, C. P. Wolk, T. Kuritz, S. Sasamoto, A. Watanabe, M. Iriguchi, A. Ishikawa, K. Kawashima, T. Kimura, Y. Kishida, M. Kohara, M. Matsumoto, A. Matsuno, A. Muraki, N. Nakazaki, S. Shimpo, M. Sugimoto, M. Takazawa, M. Yamada, M. Yasuda, and S. Tabata. 2001. Complete genomic sequence of the filamentous nitrogen-fixing cyanobacterium Anabaena sp. strain PCC 7120. DNA Res. 8:205-213, 227-253.
28. Lang, J. D., and R. Haselkorn. 1991. A vector for analysis of promoters in the cyanobacterium Anabaena sp. strain PCC 7120. J. Bacteriol. 173:2729-2731.
29. Li, B., X. Huang, and J. Zhao. 2002. Expression of hetN during heterocyst differentiation and its inhibition of hetR up-regulation in the cyanobacterium Anabaena sp. PCC 7120. FEBS Lett. 517:87-91.
30. Liu, D., and J. W. Golden. 2002. hetL overexpression stimulates heterocyst formation in Anabaena sp. strain PCC 7120. J. Bacteriol. 184:6873-6881.
31. Mann, N., and N. G. Carr. 1974. Control of macromolecular composition and cell division in the blue-green algae Anacystis nidulans. J. Gen. Microbiol. 83:399-405.
32. Meeks, J. C., and J. Elhai. 2002. Regulation of cellular differentiation in filamentous cyanobacteria in free-living and plant-associated symbiotic growth states. Microbiol. Mol. Biol. Rev. 66:94-121.
33. Meeks, J. C., J. Elhai, T. Thiel, M. Potts, F. Larimer, J. Lamerdin, P. Predki, and R. Atlas. 2001. An overview of the genome of Nostoc punctiforme, a multicellular, symbiotic cyanobacterium. Photosyn. Res. 70:85-106.
34. Osborn, A. M., F. M. da Silva Tatley, L. M. Steyn, R. W. Pickup, and J. R. Saunders. 2000. Mosaic plasmids and mosaic replicons: evolutionary lessons from the analysis of genetic diversity in IncFII-related replicons. Microbiology 146:2267-2275.
35. Paerl, H. W., J. L. Pinckney, and T. F. Steppe. 2000. Cyanobacterial-bacterial mat consortia: examining the functional unit of microbial survival and growth in extreme environments. Environ. Microbiol. 2:11-26.
36. Rigali, S., A. Derouaux, F. Giannotta, and J. Dusart. 2002. Subdivision of the helix-turn-helix GntR family of bacterial regulators in the FadR, HutC, MocR, and YtrA subfamilies. J. Biol. Chem. 277:12507-12515.
37. Roberts, T. M., and K. E. Koths. 1976. The blue-green alga Agmenellum quadruplicatum contains covalently closed DNA circles. Cell 9:551-557.
38. Schopf, J. W. 2000. The paleobiologic record of cyanobacterial evolution, p. 105-129. In Y. V. Brun and L. J. Shimkets (ed.), Prokaryotic development. American Society for Microbiology, Washington, D.C.
39. Schopf, J. W., A. B. Kudryavtsev, D. G. Agresti, T. J. Wdowiak, and A. D. Czaja. 2002. Laser-Raman imagery of Earth's earliest fossils. Nature 416:73-76.
40. Sezonov, G., A. M. Duchene, A. Friedmann, M. Guerineau, and J. L. Pernodet. 1998. Replicase, excisionase, and integrase genes of the Streptomyces element pSAM2 constitute an operon positively regulated by the pra gene. J. Bacteriol. 180:3056-3061.
41. Sezonov, G., J. Hagege, J. L. Pernodet, A. Friedmann, and M. Guerineau. 1995. Characterization of pra, a gene for replication control in pSAM2, the integrating element of Streptomyces ambofaciens. Mol. Microbiol. 17:533-544.
42. Sezonov, G., C. Possoz, A. Friedmann, J. L. Pernodet, and M. Guerineau. 2000. KorSA from the Streptomyces integrative element pSAM2 is a central transcriptional repressor: target genes and binding sites. J. Bacteriol. 182:1243-1250.
43. Simon, R. D. 1977. Macromolecular composition of spores from the filamentous cyanobacterium Anabaena cylindrica. J. Bacteriol. 129:1154-1155.
44. Subramaniam, S. 1998. The Biology Workbench - a seamless database and analysis environment for the biologist. Proteins 32:1-2.
45. Takeyama, H., H. Nakayama, and T. Matsunaga. 2000. Salinity-regulated replication of the endogenous plasmid pSY10 from the marine cyanobacterium Synechococcus sp. Appl. Biochem. Biotechnol. 84-86:447-453.
46. Tandeau de Marsac, N. 1994. Differentiation of hormogonia and relationships with other biological processes, p. 825-842. In D. A. Bryant (ed.), The molecular biology of cyanobacteria, vol. 1. Kluwer Academic Publishers, Dordrecht, The Netherlands.
47. Wei, T.-F., T. S. Ramasubramanian, and J. W. Golden. 1994. Anabaena sp. strain PCC 7120 ntcA gene required for growth on nitrate and heterocyst development. J. Bacteriol. 176:4473-4482.
48. Wolk, C. P. 1967. Physiological basis of the pattern of vegetative growth of a blue-green alga. Proc. Natl. Acad. Sci. USA 57:1246-1251.
49. Wolk, C. P., A. Vonshak, P. Kehoe, and J. Elhai. 1984. Construction of shuttle vectors capable of conjugative transfer from Escherichia coli to nitrogen-fixing filamentous cyanobacteria. Proc. Natl. Acad. Sci. USA 81:1561-1565.
50. Xu, X., and C. P. Wolk. 2001. Role for hetC in the transition to a nondividing state during heterocyst differentiation in Anabaena sp. J. Bacteriol. 183:393-396.
51. Yanisch-Perron, C., J. Vieira, and J. Messing. 1985. Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors. Gene 33:103-119.
52. Yoon, H. S., and J. W. Golden. 1998. Heterocyst pattern formation controlled by a diffusible peptide. Science 282:935-938.
53. Yoon, H. S., and J. W. Golden. 2001. PatS and products of nitrogen fixation control heterocyst pattern. J. Bacteriol. 183:2605-2613.