A comparison between the crystal and solution structures of Escherichia coli asparaginase II

Acta Biochimica Polonica

Volumn 49, Issue 2, 2002, Pages 509-513

  Kozak, Maciej ^a   Jurga, Stefan ^a  

^a ADAM MICKIEWICZ UNIVERSITY   (Poland)

Author keywords

Asparaginase; Small angle X ray scattering; Structure in solution

Indexed keywords

ESCHERICHIA COLI;

ASPARAGINASE;

ARTICLE; CHEMICAL STRUCTURE; CHEMISTRY; COMPARATIVE STUDY; CRYSTALLIZATION; ENZYMOLOGY; ESCHERICHIA COLI; SOLUTION AND SOLUBILITY; X RAY DIFFRACTION;

ASPARAGINASE; CRYSTALLIZATION; ESCHERICHIA COLI; MODELS, MOLECULAR; SOLUTIONS; X-RAY DIFFRACTION;

EID: 0040074702     PISSN: 0001527X     EISSN: None     Source Type: Journal    
DOI: 10.18388/abp.2002_3810     Document Type: Article

References (20)

1. Boulin C, Kempf R, Koch MHJ, McLaughlin S. (1986) Data acquisition systems for linear and area X-ray detectors using delay line readout. Nucl Instrum Methods.; A249: 399-407.
2. Boulin CJ, Kempf R, Gabriel A, Koch MHJ. (1988) Data acquisition systems for linear and area X-ray detectors using delay line readout. Nucl Instrum Methods Phys Res.; A269: 312-20.
3. Bu Z, Koide S, Engelman DM. (1998) A solution SAXS study of Borrelia burgdorferi OspA a protein containing a single-layer β-sheet. Protein Sci.; 7: 2681-3.
4. Chakrabarti R. (1997) L-Asparaginase perspectives on the mechanisms of action and resistance. Int J Pediatr Hematol Oncol.; 4: 597-611.
5. Guinier A. (1939) La diffraction des rayons X aux trés petits angles; application à l'étude de phénomènes ultramicroscopiques. Ann Phys.; 12: 166-237.
6. Janowski R, Kozak M, Jankowska E, Grzonka Z, Grubb A, Abrahamson M, Jaskólski M. (2001) Human cystatin C, an amyloidogenic protein, dimerizes through three-dimensional domain swapping. Nature Struc Biol.; 8: 316-20.
7. Jaskolski M, Kozak M, Lubkowski J, Palm G, Wlodawer A. (2001) Structures of two highly homologous bacterial L-asparaginases: a case of enantiomorphic space groups. Acta Cryst.; D57: 369-77.
8. Koch MHJ, Bordas J. (1983) X-Ray diffraction and scattering on disordered systems using synchrotron radiation. Nucl Instrum Methods.; 208: 461-9.
9. Kozak M, Jaskólski M. (2000) Crystallization and preliminary crystallographic studies of a new crystal form of Escherichia coli L-asparaginase II (S58A mutant) Acta Cryst; D56: 509-11.
10. Kozak M, Jaskólski M, Röhm KH. (2000) Preliminary crystallographic studies of Y25F mutant of periplasmic Escherichia coli L-asparaginase Acta Biochim Polon.; 47: 807-14.
11. Kozak M, Borek D, Janowski R, Jaskólski M. (2002) Crystallization and preliminary crystallographic studies of five crystal forms of Escherichia coli L-asparaginase II (Asp90Glu mutant) Acta Cryst.; D58: 130-2.
12. Lindqvist Y, Schneider G, Ermler U, Sundström M. (1992) Three-dimensional structure of transketolase, a thiamine diphosphate-dependent enzyme, at 2.5 Å resolution. EMBO J.; 11: 2373-9.
13. Lubkowski J, Wlodawer A, Housset D, Weber IT, Ammon HL, Murphy KC, Swain AL. (1994) Refined crystal structure of Acinebacter glutaminaficans glutaminase-asparaginase. Acta Cryst; D50, 826-32.
14. Murthy NS, Knox JR. (1976) Small-angle X-ray scattering studies of Escherichia coli L-asparaginase. J Mol Biol; 30: 567-75.
15. Palm GJ, Lubkowski J, Derst C, Schleper S, Rohm KH, Wlodawer A. (1996) A covalently bound catalytic intermediate in Escherichia coli asparaginase: crystal structure of a Thr-89-Val mutant. FEBS Lett.; 390: 211-6.
16. Semenyuk AV, Svergun DI. (1991) GNOM - A program package for small-angle scattering data processing. J Appl Cryst; 24: 537-40.
17. Svergun DI, Barberato D, Koch MHJ. (1995) CRYSOL - a program to evaluate X-ray solution scattering of biological macromolecules from atomic coordinates J Appl Cryst; 28: 768-73.
18. Svergun DI, Burkhardt N, Skov Pedersen J, Koch MHJ, Volkov W, Kozin MB, Meervink W, Stuhrmann HB, Diedrich G, Nierhaus KH. (1997) Solution scattering structural analysis of the 70 S Escherichia coli ribosome by contrast variation. J Mol Biol; 271: 588-601, 602-18.
19. Svergun DI, Petoukhov MV, Koch MHJ, König S. (2000) Crystal versus solution structures of thiamine diphosphate-dependent enzymes. J Biol Chem.; 275: 297-302.
20. Swain AL, Jaskólski M, Housset D, Rao JKM, Wlodawer A. (1993) Crystal structure of Escherichia coli L-asparaginase, an enzyme used in cancer therapy. Proc Natl Acad Sci U S A.; 90: 1472-8.