Recruitment of octamer transcription factors to DNA by glucocorticoid receptor

Molecular and Cellular Biology

Volumn 18, Issue 6, 1998, Pages 3416-3430

  Préfontaine, Gratien G ^a   Lemieux, Madeleine E ^a   Giffin, Ward ^a   Schild Poulter, Caroline ^a   Pope, Louise ^a   LaCasse, Eric ^a   Walker, Peter ^a   Haché, Robert J G ^a  

^a OTTAWA HOSPITAL RESEARCH INSTITUTE   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

DNA; GLUCOCORTICOID RECEPTOR; HEAT SHOCK PROTEIN; TRANSCRIPTION FACTOR;

ANIMAL CELL; ARTICLE; BINDING SITE; CHO CELL; CONTROLLED STUDY; HORMONE RESPONSIVE ELEMENT; NONHUMAN; POINT MUTATION; PRIORITY JOURNAL; PROTEIN DNA BINDING; PROTEIN PROTEIN INTERACTION; RAT; TRANSCRIPTION REGULATION;

ANIMALIA; MAMMALIA; MAMMARY TUMOR VIRUS; MOUSE MAMMARY TUMOR VIRUS; TUMOR VIRUS;

EID: 0039316318     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.18.6.3416     Document Type: Article

References (106)

1. Andrews, N. C., and D. V. Faller. 1991. A rapid micropreparation technique for extraction of DNA-binding proteins from limiting numbers of mammalian cells. Nucleic Acids Res. 19:2499.
2. Archer, T. K., M. G. Cordingley, R. G. Wolford, and G. L. Hager. 1991. Transcription factor access is mediated by accurately positioned nucleosomes on the mouse mammary tumor virus promoter. Mol. Cell. Biol. 11:688-698.
3. Archer, T. K., P. Lefebvre, R. G. Wolford, and G. L. Hager. 1992. Transcription factor loading on the MMTV promoter: a bimodal mechanism for promoter activation. Science 255:1573-1576.
4. Baumann, H., K. Paulsen, H. Kovacs, H. Berglund, A. P. H. Wright, J.-Å. Gustafsson, and T. Härd. 1993. Refined solution structure of the glucocorticoid receptor DNA-binding domain. Biochemistry 32:13463-13471.
5. Beato, M. 1989. Gene regulation by steroid hormones. Cell 56:335-344.
6. Beato, M., and K. Eisfeld. 1997. Transcription factor access to chromatin. Nucleic Acids Res. 25:3559-3563.
7. Beato, M., P. Herrlich, and G. Schütz. 1995. Steroid receptors: many actors in search of a plot. Cell 83:851-857.
8. Brüggemeier, U., M. Kalff, S. Franke, C. Scheidereit, and M. Beato. 1991. Ubiquitous transcription factor OTF-1 mediates induction of the MMTV promoter through synergistic interaction with hormone receptors. Cell 64:565-572.
9. Brüggemeier, U., L. Rogge, E. L. Winnacker, and M. Beato. 1990. Nuclear factor I acts as a transcription factor on the MMTV promoter but competes with steroid hormone receptors for DNA binding. EMBO J. 9:2233-2239.
10. Buetti, E. 1994. Stably integrated mouse mammary tumor virus long terminal repeat DNA requires the octamer motifs for basal promoter activity. Mol. Cell. Biol. 14:1191-1203.
11. Buetti, E., B. Kühnel, and H. Diggelmann. 1989. Dual function of a nuclear factor I binding site in MMTV transcription regulation. Nucleic Acids Res. 17:3065-3078.
12. Cato, A. C. B., R. Miksicek, G. Schütz, J. Arnemann, and M. Beato. 1986. The hormone regulatory element of mouse mammary tumor virus mediates progesterone induction. EMBO J. 5:2237-2240.
13. Cato, A. C. B., P. Skroch, J. Weinmann, P. Butkeraitis, and H. Ponta. 1988. DNA sequences outside the receptor-binding sites differently modulate the responsiveness of the mouse mammary tumour virus promoter to various steroid hormones. EMBO J. 7:1403-1410.
14. Chakravarti, D., V. J. LaMorte, M. C. Nelson, T. Nakajima, I. G. Schulman, H. Juguilon, M. Montminy, and R. M. Evans. 1996. Role of CBP/P300 in nuclear receptor signalling. Nature 383:99-103.
15. Chalepakis, G., J. Arnemann, E. Slater, H. J. Bruller, B. Gross, and M. Beato. 1988. Differential gene activation by glucocorticoids and progestins through the hormone regulatory element of mouse mammary tumor virus. Cell 53:371-382.
16. Chan, S. K., L. Jaffe, M. Capovilla, J. Botas, and R. S. Mann. 1994. The DNA binding specificity of Ultrabithorax is modulated by cooperative interactions with extradenticle, another homeoprotein. Cell 78:603-615.
17. Chavez, S., and M. Beato. 1997. Nucleosome-mediated synergism between transcription factors on the mouse mammary tumor virus promoter. Proc. Natl. Acad. Sci. USA 94:2885-2890.
18. Cleary, M. A., and W. Herr. 1995. Mechanisms for flexibility in DNA sequence recognition and VP16-induced complex formation by the Oct-1 POU domain. Mol. Cell. Biol. 15:2090-2100.
19. Cleary, M. A., S. Stern, M. Tanaka, and W. Herr. 1993. Differential positive control by Oct-1 and Oct-1: activation of a transcriptionally silent motif through Oct-1 and VP-16 corecruitment. Genes Dev. 7:72-83.
20. Clerc, R., L. Corcoran, H. LeBowitz, D. Baltimore, and P. Sharp. 1988. The B-cell specific Oct-2 protein contains a POU box and homeo-box-type domains. Genes Dev. 2:1570-1581.
21. Cordingley, M. G., A. T. Riegel, and G. L. Hager. 1987. Steroid-dependent interaction of transcription factors with the inducible promoter of mouse mammary tumor virus in vivo. Cell 48:261-270.
22. Dalman, F. C., E. H. Bresnick, P. D. Patel, G. H. Perdew, S. J. Watson, Jr., and W. B. Pratt. 1989. Direct evidence that the glucocorticoid receptor hinds to hsp90 at or near the termination of receptor translation in vitro. J. Biol. Chem. 264:19815-19821.
23. Dang, C. V., J. Barrett, M. Villa-Garcia, L. M. Resar, G. J. Kato, and E. R. Fearon. 1991. Intracellular leucine zipper interactions suggest c-Myc hetero-oligomerization. Mol. Cell. Biol. 11:954-962.
24. de Groot, R. P., V. Delmas, and P. Sassone-Corsi. 1994. DNA bending by transcription factors CREM and CREB. Oncogene 9:463-468.
25. Denis, M., L. Poellinger, A.-C. Wilstom, and J.-Å. Gustafsson. 1988. Requirement of hormone for thermal conversion of the glucocorticoid receptor to the DNA-binding state. Nature 333:686-688.
26. Diamond, M. I., J. N. Miner, S. K. Yoshinaga, and K. R. Yamamoto. 1990. c-Jun and c-Fos levels specify positive or negative glucocorticoid regulation from a composite GRE. Science 249:1266-1272.
27. Falkner, F. G., and H. G. Zachau. 1984. Correct transcription of an immunoglobulin kappa gene requires an upstream fragment containing conserved sequence elements. Nature 310:71-74.
28. Falzon, M., and E. L. Kuff. 1990. A variant binding sequence for transcription factor EBP-80 confers increased promoter activity on a retroviral long terminal repeat. J. Biol. Chem. 265:13084-13090.
29. Freedman, L. P., B. F. Luisi, Z. R. Korszun, R. Basavappa, P. B. Sigler, and K. R. Yamamoto. 1988. The function and structure of the metal coordination sites within the glucocorticoid receptor DNA binding domain. Nature 334:543-546.
30. Giffin, W., H. Torrance, D. J. Rodda, G. G. Préfontaine, L. Pope, and R. J. G. Haché. 1996. Sequence-specific DNA binding by Ku autoantigen and its effects on transcription. Nature 380:265-268.
31. Gill, G., and M. Ptashne. 1988. Negative effect of the transcriptional activator GAL4. Nature 334:721-724.
32. Gstaiger, M., O. Georgiev, H. van Leeuwen, P. van der Vliet, and W. Schaffner. 1996. The B cell coactivator Bob1 shows DNA sequence-dependent complex formation with Oct-1/Oct-2 factors, leading to differential promoter activation. EMBO J. 15:2781-2790.
33. Gstaiger, M., L. Knoepfel, O. Georgiev, W. Schaffner, and C. M. Hovens. 1995. A B-cell coactivator of octamer-hinding transcription factors. Nature 373:360-362.
34. Guichet, A., J. W. Copeland, M. Erdelyi, D. Hlousek, P. Zavorszky, J. Ho, S. Brown, A. Percival-Smith, H. M. Krause, and A. Ephrussi. 1997. The nuclear receptor homologue Ftz-F1 and the homeodomain protein Ftz are mutually dependent cofactors. Nature 385:548-552.
35. Hassan, B., L. Li, K. A. Bremer, W. Chang, J. Pinsonneault, and H. Vaessin. 1997. Prospero is a panneural transcription factor that modulates homeodomain protein activity. Proc. Natl. Acad. Sci. USA 94:10991-10996.
36. Hayashi, S., and M. P. Scott. 1990. What determines the specificity of action of Drosophila homeo domain proteins? Cell 63:883-894.
37. Heck, S., M. Kullmann, A. Gast, H. Ponta, H. J. Rahmsdorf, P. Herrlich, and A. C. Cato. 1994. A distinct modulating domain in glucocorticoid receptor monomers in the repression of activity of the transcription factor AP-1. EMBO J. 13:4087-4095.
38. Howard, K. J., S. J. Holley, K. R. Yamamoto, and C. W. Distelhorst. 1990. Mapping the HSP90 binding region of the glucocorticoid receptor. J. Biol. Chem. 265:11928-11935.
39. Hutchison, K. A., G. Matic, M. J. Czar, and W. B. Pratt. 1992. DNA-binding and non-DNA-binding forms of the transformed glucocorticoid receptor. J. Steroid Biochem. Mol. Biol. 41:715-718.
40. Kalff, M., B. Gross, and M. Beato. 1990. Progesterone receptor stimulates transcription of mouse mammary tumour virus in a cell-free system. Nature 344:360-362.
41. Klemm, J. D., M. A. Rould, R. Aurora, W. Herr, and C. O. Pabo. 1994. Crystal structure of the Oct-1 POU domain bound to an octamer site: DNA recognition with tethered DNA-binding modules. Cell 77:21-32.
42. Kristie, T. M., and P. A. Sharp. 1990. Interactions of the Oct-1 POU subdomains with specific DNA sequences and with the HSV alpha-transactivator protein. Genes Dev. 4:2383-2396.
43. Kurokawa, R., M. Soderström, A. Horlein, S. Halachmi, M. Brown, M. G. Rosenfeld, and C. K. Glass. 1995. Polarity-specific activities of retinoic acid receptors determined by a co-repressor. Nature 377:451-454.
44. Kurokawa, R., V. C. Yu, A. Naar, S. Kyakumoto, Z. Han, S. Silverman, M. G. Rosenfeld, and C. K. Glass. 1993. Differential orientations of the DNA-binding domain and carboxy-terminal dimerization interface regulate binding site selection by nuclear receptor heterodimers. Genes Dev. 7:1423-1435.
45. Kutoh. E., P.-E. Strömstedt, and L. Poellinger. 1992. Functional interference between the ubiquitous and constitutive octamer transcription factor 1 (OTF-1) and the glucocorticoid receptor by direct protein-protein interaction involving the homeo subdomain of OTF-1. Mol. Cell. Biol. 12:4960-4969.
46. Lai, J.-S., M. A. Cleary, and W. Herr. 1992. A single amino acid exchange transfers VP16-induced positive control from the Oct-1 to the Oct-2 homeo domain. Genes Dev. 6:2058-2065.
47. Lai, J.-S., and W. Herr. 1992. Ethidium bromide provides a simple tool for identifying genuine DNA-independent protein associations. Proc. Natl. Acad. Sci. USA 89:6958-6962.
48. Laudet, V., C. Hanni, J. Coll, F. Catzeflis, and D. Stehelin. 1992. Evolution of the nuclear receptor gene superfamily. EMBO J. 11:1003-1013.
49. Leach, K. L., M. K. Dahmer, N. D. Hammond, J. J. Sando, and W. B. Pratt. 1979. Molybdate inhibition of glucocorticoid receptor inactivation and transformation. J. Biol. Chem. 254:11884-11890.
50. Lee, H. L., and T. K. Archer. 1994. Nucleosome-mediated disruption of transcription factor-chromatin initiation complexes at the mouse mammary tumor virus long terminal repeat in vivo. Mol. Cell. Biol. 14:32-41.
51. Lee, J. W., P. G. Moffitt, K. L. Morley, and D. O. Peterson. 1991. Multipartite structure of a negative regulatory element associated with a steroid hormone-inducible promoter. J. Biol. Chem. 266:24101-24108.
52. Lemieux, M. E., G. G. Préfontaine, L. Pope, and R. J. G. Haché. Unpublished data.
53. Li, P., X. He, M. R. Gerrero, M. Mok, A. Aggarwal, and M. G. Rosenfeld. 1993. Spacing and orientation of bipartite DNA-binding motifs as potential functional determinants for POU domain factors. Genes Dev. 7:2483-2496.
54. Lillie, J. W., and M. R. Green. 1989. Transcription activation by the adenovirus E1a protein. Nature 338:39-44.
55. Lu, Q., L. L. Wallrath, and S. C. Elgin. 1995. The role of a positioned nucleosome at the Drosophila melanogaster hsp26 promoter. EMBO J. 14:4738-4746.
56. Luisi, B. F., W. X. Xu, Z. Otwinowski, L. P. Freedman, K. R. Yamamoto, and P. B. Sigler. 1991. Crystallographic analysis of the interaction of the glucocorticoid receptor with DNA. Nature 352:497-505.
57. Luo, X., Y. Ikeda, and K. L. Parker. 1994. A cell-specific nuclear receptor is essential for adrenal and gonadal development and sexual differentiation. Cell 77:481-490.
58. Miesfeld, R., S. Rusconi, P. J. Godowski, B. A. Maler, S. Okret, A.-C. Wilkström, J.-Å. Gustafsson, and K. R. Yamamoto. 1986. Genetic complementation of a glucocorticoid receptor deficiency by expression of cloned receptor cDNA. Cell 46:389-399.
59. Miksicek, R., U. Borgmeyer, and J. Nowock. 1987. Interaction of the TGGCA-binding protein with upstream sequences is required for efficient transcription of mouse mammary tumor virus. EMBO J. 6:1355-1360.
60. Mueller, P. R., and B. Wold. 1989. In vivo footprinting of a muscle specific enhancer by ligation mediated PCR. Science 246:780-786.
61. Mymryk, J., and T. Archer. 1994. Detection of transcription factor binding in vivo using lambda exonuclease. Nucleic Acids Res. 22:4344-4345.
62. Näär, A. M., J. M. Boutin, S. M. Lipkin, V. C. Yu, J. M. Holloway, C. K. Glass, and M. G. Rosenfeld. 1991. The orientation and spacing of core DNA-binding motifs dictate selective transcriptional responses to three nuclear receptors. Cell 65:1267-1279.
63. Nishio, Y., H. Isshiki, T. Kishimoto, and S. Akira. 1993. A nuclear factor for interleukin-6 expression (NF-IL6) and the glucocorticoid receptor synergistically activate transcription of the rat alpha 1-acid glycoprotein gene via direct protein-protein interaction. Mol. Cell. Biol. 13:1854-1862.
64. Ostlund Farrants, A.-K., P. Blomquist, H. Kwon, and Ö. Wrange. 1997. Glucocorticoid receptor-glucocorticoid response element binding stimulates nucleosome disruption by the SWI/SNF complex. Mol. Cell. Biol. 17:895-905.
65. Parks, W. P., E. S. Hubbell, R. J. Goldberg, F. J. O'Neill, and E. M. Scolnick. 1976. High frequency variation in mammary tumor virus expression in cell culture. Cell 8:87-93.
66. Pearce, D., and K. R. Yamamoto. 1993. Mineralocorticoid and glucocorticoid receptor activities distinguished by nonreceptor factors at a composite response element. Science 259:1161-1165.
67. Perlmann, T., and Ö. Wrange. 1988. Specific glucocorticoid receptor binding to DNA reconstituted in a nucleosome. EMBO J. 7:3073-3079.
68. Philips, A., M. Maira, A. Mullick, M. Chamberland, S. Lesage, P. Hugo, and J. Drouin. 1997. Antagonism between Nur77 and glucocorticoid receptor for control of transcription. Mol. Cell. Biol. 17:5952-5959.
69. Picard, D., and K. R. Yamamoto. 1987. Two signals mediate hormone-dependent nuclear localization of the glucocorticoid receptor. EMBO J. 6:3333-3340.
70. Piña, B., U. Brüggemeier, and M. Beato. 1990. Nucleosome positioning modulates accessibility of regulatory proteins to the mouse mammary tumor virus promoter. Cell 60:719-731.
71. Power, S. C., and S. Cereghini. 1996. Positive regulation of the vHNF1 promoter by the orphan receptors COUP-TFI/Ear3 and COUP-TFII/Arp1. Mol. Cell. Biol. 16:778-791.
72. Pratt, W. B., and D. O. Toft. 1997. Steroid receptor interactions with heat shock protein and immunophilin chaperones. Endocr. Rev. 18:306-360.
73. Préfontaine, G. G., and R. J. G. Haché. Unpublished data.
74. Pugh, B. 1996. Mechanisms of transcription complex assembly. Curr. Opin. Cell Biol. 8:303-311.
75. Reeves, R., C. M. Gorman, and B. Howard. 1985. Minichromosome assembly of non-integrated plasmid DNA transfected into mammalian cells. Nucleic Acids Res. 13:3599-3615.
76. Rusconi, S., and K. R. Yamamoto. 1987. Functional dissection of the hormone and DNA-binding activities of the glucocorticoid receptor. EMBO J. 6:1309-1315.
77. Sadowski, I., J. Ma, S. Trienzenberg, and M. Ptashne. 1988. GAL4-VP16 is an unusually potent transcriptional activator. Nature 335:563-564.
78. Scheidereit, C., S. Geisse, H. M. Westphal, and M. Beato. 1983. The glucocorticoid receptor binds to defined nucleotide sequences near the promoter of mouse mammary tumour virus. Nature 304:749-752.
79. Schena, M., L. P. Freedman, and K. R. Yamamoto. 1989. Mutations in the glucocorticoid receptor zinc finger region that distinguish interdigitated DNA binding and transcriptional enhancement activities. Genes Dev. 3:1590-1601.
80. Schüle, R., M. Müller, C. Kaltschmidt, and R. Renkawitz. 1988. Many transcription factors interact synergistically with steroid receptors. Science 242:1418-1420.
81. Schüle, R., P. Rangarajan, S. Kliewer, L. J. Ransone, J. Bolado, N. Yang, I. M. Verma, and R. M. Evans. 1990. Functional antagonism between oncoprotein c-Jun and the glucocorticoid receptor. Cell 62:1217-1226.
82. Stöcklin, E., M. Wissler, F. Gouilleux, and B. Groner. 1996. Functional interactions between Stat5 and the glucocorticoid receptor. Nature 383:726-728.
83. Strahle, U., G. Klock, and G. Schütz. 1987. A DNA sequence of 15 base pairs is sufficient to mediate both glucocorticoid and progesterone induction of gene expression. Proc. Natl. Acad. Sci. USA 84:7871-7875.
84. Strubin, M., J. W. Newell, and P. Matthias. 1995. OBF-1, a novel B cell-specific coactivator that stimulates immunoglobulin promoter activity through association with octamer-binding proteins. Cell 80:497-506.
85. Sturm, R. A., G. Das, and W. Herr. 1988. The ubiquitous octamer-binding protein Oct-1 contains a POU domain with a homeo box subdomain. Genes Dev. 2:1582-1599.
86. Tanaka, M., and W. Herr. 1990. Differential transcriptional activation by Oct-1 and Oct-2: interdependent activation domains induce Oct-2 phosphorylation. Cell 60:375-386.
87. Tienrungroj, W., S. Meshinchi, E. R. Sanchez, S. E. Pratt, J. F. Grippo, A. Holmgren, and W. B. Pratt. 1987. The role of sulfhydryl groups in permitting transformation and DNA binding of the glucorticoid recepetor. J. Biol. Chem. 262:6992-7000.
88. Tjian, R., and T. Maniatis. 1994. Transcriptional activation: a complex puzzle with few easy pieces. Cell 77:5-8.
89. Toohey, M. G., J. W. Lee, M. Huang, and D. O. Peterson. 1990. Functional elements of the steroid hormone-responsive promoter of mouse mammary tumor virus. J. Virol. 64:4477-4488.
90. Treisman, R., R. Marais, and J. Wynne. 1992. Spatial flexibility in ternary complexes between SRF and its accessory proteins. EMBO J. 11:4631-4640.
91. Truss, M., J. Bartsch, A. Schelbert, R. J. G. Haché, and M. Beato. 1995. Hormone induces binding of receptors and transcription factors to a rear-ranged nucleosome on the MMTV promoter in vivo. EMBO J. 14:1737-1751.
92. Truss, M., G. Chalepakis, and M. Beato. 1992. Interplay of steroid hormone receptors and transcription factors on the mouse mammary tumor virus promoter. J. Steroid Biochem. Mol. Biol. 43:365-378.
93. Truss, M., G. Chalepakis, E. P. Slater, S. Mader, and M. Beato. 1991. Functional interaction of hybrid response elements with wild-type and mutant steroid hormone receptors. Mol. Cell. Biol. 11:3247-3258.
94. Umesono, K., K. K. Murakami, C. C. Thompson, and R. M. Evans. 1991. Direct repeats as selective response elements for the thyroid hormone, retinoic acid, and vitamin D3 receptors. Cell 65:1255-1266.
95. van Dijk, M. A., and C. Murre. 1994. Extradenticle raises the DNA binding specificity of homeotic selector gene products. Cell 78:617-624.
96. van Dijk, M. A., L. T. Peltenburg, and C. Murre. 1995. Hox gene products modulate the DNA binding activity of Pbx1 and Pbx2. Mech. Dev. 52:99-108.
97. Verrijzer, C. P., M. J. Alkema, W. W. van Weperen, H. C. Van Leeuwen, M. J. Strating, and P. C. van der Vliet. 1992. The DNA binding specificity of the bipartite POU domain and its subdomains. EMBO J. 11:4993-5003.
98. Walker, S., S. Hayes, and P. O'Hare. 1994. Site-specific conformational alteration of the oct-1 POU domain-DNA complex as the basis for differential recognition by vmw65 (VP16). Cell 79:841-852.
99. Walther, R., and R. J. G. Haché. Unpublished data.
100. Wang, J. M., et al. Unpublished data.
101. Wegner, M., D. W. Drolet, and M. G. Rosenfeld. 1993. POU-domain proteins: structure and function of developmental regulators. Curr. Opin. Cell Biol. 5:488-498.
102. Wieland, S., U. Döbbeling, and S. Rusconi. 1991. Interference and synergism of glucocorticoid receptor and octamer factors. EMBO J. 10:2513-2521.
103. Wrange, Ö., J. Carlstedt-Duke, and J. Å. Gustafsson. 1986. Stoichiometric analysis of the specific interaction of the glucocorticoid receptor with DNA. J. Biol. Chem. 261:11770-11778.
104. Wu, C. 1984. Two protein-binding sites in chromatin implicated in the activation of heat-shock genes. Nature 309:229-234.
105. Yang-Yen, H. F., J. C. Chambard, Y. L. Sun, T. Smeal, T. J. Schmidt, J. Drouin, and M. Karin. 1990. Transcriptional interference between c-Jun and the glucocorticoid receptor: mutual inhibition of DNA binding due to direct protein-protein interaction. Cell 62:1205-1215.
106. Yu, Y., W. Li, K. Su, M. Yussa, W. Han, N. Perrimon, and L. Pick. 1997. The nuclear hormone receptor Ftz-F1 is a cofactor for the Drosophila homeodomain protein Ftz. Nature 385:552-555.