-
1
-
-
0027990373
-
Structure and stability of human telomeric sequence
-
Balagurumoorthy P., Brahmachari K. Structure and stability of human telomeric sequence. J. Biol. Chem. 269:1994;21858-21869.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 21858-21869
-
-
Balagurumoorthy, P.1
Brahmachari, K.2
-
2
-
-
0031030491
-
A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates
-
Bashkirov V.I., Scherthan H., Solinger J.A., Buerstedde W.D. A mouse cytoplasmic exoribonuclease (mXRN1p) with preference for G4 tetraplex substrates. J. Cell Biol. 136:1997;761-773.
-
(1997)
J. Cell Biol.
, vol.136
, pp. 761-773
-
-
Bashkirov, V.I.1
Scherthan, H.2
Solinger, J.A.3
Buerstedde, W.D.4
-
3
-
-
0026742978
-
The Nucleic Acid Database: A comprehensive relational data base of three-dimensional structure of nucleic acids
-
Berman H.M., Olson W.K., Beveridge D.L., Westbrook J., Gelbin A., Demeny T., Hsieh S.-H., Srinivasan A.R., Schneider B. The Nucleic Acid Database. a comprehensive relational data base of three-dimensional structure of nucleic acids Biophys. J. 63:1992;751-759.
-
(1992)
Biophys. J.
, vol.63
, pp. 751-759
-
-
Berman, H.M.1
Olson, W.K.2
Beveridge, D.L.3
Westbrook, J.4
Gelbin, A.5
Demeny, T.6
Hsieh, S.-H.7
Srinivasan, A.R.8
Schneider, B.9
-
4
-
-
0025731583
-
Structure and function of telomeres
-
Blackburn E.H. Structure and function of telomeres. Nature. 350:1991;569-573.
-
(1991)
Nature
, vol.350
, pp. 569-573
-
-
Blackburn, E.H.1
-
5
-
-
0024967079
-
Translation of chloroplast-encoded mRNA: Potential initiation and termination signals
-
Bonham-Smith P.C., Bourque D.P. Translation of chloroplast-encoded mRNA. potential initiation and termination signals Nucleic Acids Res. 17:1989;2057-2080.
-
(1989)
Nucleic Acids Res.
, vol.17
, pp. 2057-2080
-
-
Bonham-Smith, P.C.1
Bourque, D.P.2
-
6
-
-
0032566709
-
A K cation-induced conformational switch within a loop spanning segment of a DNA quadruplex containing G-G-G-C repeats
-
Bouaziz S., Kettani A., Patel D.J. A K cation-induced conformational switch within a loop spanning segment of a DNA quadruplex containing G-G-G-C repeats. J. Mol. Biol. 282:1998;637-652.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 637-652
-
-
Bouaziz, S.1
Kettani, A.2
Patel, D.J.3
-
7
-
-
3543012707
-
Crystallography and NMR System: A new software suite for macromolecular structure determination
-
Brünger A.T., Adams P.D., Clore G.M., DeLano W.L., Gros P., Grosse-Kunstleve R.W., Jiang J.S., Kuszewski J., Nilges M., Pannu N.S.et al. Crystallography and NMR System. a new software suite for macromolecular structure determination Acta Crystallogr. D Biol. Crystallogr. 54:1998;905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
-
8
-
-
0026737313
-
Solution structure of an unusually stable RNA tetraplex containing G and U-quartet structures
-
Cheong C., Moore P.B. Solution structure of an unusually stable RNA tetraplex containing G and U-quartet structures. Biochemistry. 36:1992;8406-8414.
-
(1992)
Biochemistry
, vol.36
, pp. 8406-8414
-
-
Cheong, C.1
Moore, P.B.2
-
9
-
-
0028556501
-
A guanosine quadruplex and two stable hairpins flank a major cleavage site in insulin-like growth factor II mRNA
-
Christiansen J., Kofod M., Nielsen F.C. A guanosine quadruplex and two stable hairpins flank a major cleavage site in insulin-like growth factor II mRNA. Nucleic Acids Res. 22:1994;5709-5716.
-
(1994)
Nucleic Acids Res.
, vol.22
, pp. 5709-5716
-
-
Christiansen, J.1
Kofod, M.2
Nielsen, F.C.3
-
11
-
-
0001123515
-
The structure, stability, H bonding pattern, and electrostatic potential of adenine tetrads
-
Gu J., Leszczynski J. The structure, stability, H bonding pattern, and electrostatic potential of adenine tetrads. Chem. Phys. Lett. 335:2001;465-474.
-
(2001)
Chem. Phys. Lett.
, vol.335
, pp. 465-474
-
-
Gu, J.1
Leszczynski, J.2
-
12
-
-
0025649498
-
Four-stranded nucleic acid structure 25 years later: From guanosine gels to telomer DNA
-
Guschlbauer W., Chantot J.-F., Thiele D. Four-stranded nucleic acid structure 25 years later. from guanosine gels to telomer DNA J. Biomol. Struct. Dyn. 8:1990;491-511.
-
(1990)
J. Biomol. Struct. Dyn.
, vol.8
, pp. 491-511
-
-
Guschlbauer, W.1
Chantot, J.-F.2
Thiele, D.3
-
13
-
-
0036290781
-
Crystal structure of the potassion form of an oxytricha nova G-quadruplex
-
Haider S., Parkinson G.N., Neidle S. Crystal structure of the potassion form of an oxytricha nova G-quadruplex. J. Mol. Biol. 320:2002;189-200.
-
(2002)
J. Mol. Biol.
, vol.320
, pp. 189-200
-
-
Haider, S.1
Parkinson, G.N.2
Neidle, S.3
-
14
-
-
0034637462
-
Identification of a GA-rich sequence as a protein-binding site in the 3′-untranslated region of chicken elastin mRNA with a potential role in the developmental regulation of elastin mRNA stability
-
Hew Y., Lau C., Grzelczak Z., Keeley F.W.J. Identification of a GA-rich sequence as a protein-binding site in the 3′-untranslated region of chicken elastin mRNA with a potential role in the developmental regulation of elastin mRNA stability. Biol. Chem. 275:2000;24857-24864.
-
(2000)
Biol. Chem.
, vol.275
, pp. 24857-24864
-
-
Hew, Y.1
Lau, C.2
Grzelczak, Z.3
Keeley, F.W.J.4
-
15
-
-
0030595330
-
Translational recoding induced by G-rich mRNA sequences that form unusual structure
-
Horsburgh B.C., Kollmus H., Hauser H., Coen D.M. Translational recoding induced by G-rich mRNA sequences that form unusual structure. Cell. 86:1996;949-959.
-
(1996)
Cell
, vol.86
, pp. 949-959
-
-
Horsburgh, B.C.1
Kollmus, H.2
Hauser, H.3
Coen, D.M.4
-
16
-
-
0026591751
-
Crystal structure of four-stranded Oxytricha telomeric DNA
-
Kang C., Zhang X., Ratliff R., Moyzis R., Rich A. Crystal structure of four-stranded Oxytricha telomeric DNA. Nature. 356:1992;126-131.
-
(1992)
Nature
, vol.356
, pp. 126-131
-
-
Kang, C.1
Zhang, X.2
Ratliff, R.3
Moyzis, R.4
Rich, A.5
-
17
-
-
0032566629
-
Solution structure of a Na cation stabilized DNA quadruplex containing G-G-G-G and G-C-G-C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA
-
Kettani A., Bouaziz S., Gorin A., Zhao J., Jones R.A., Patel D.J. Solution structure of a Na cation stabilized DNA quadruplex containing G-G-G-G and G-C-G-C tetrads formed by G-G-G-C repeats observed in adeno-associated viral DNA. J. Mol. Biol. 282:1998;619-636.
-
(1998)
J. Mol. Biol.
, vol.282
, pp. 619-636
-
-
Kettani, A.1
Bouaziz, S.2
Gorin, A.3
Zhao, J.4
Jones, R.A.5
Patel, D.J.6
-
18
-
-
0034737307
-
A dimeric DNA interface stabilized by stacked A-(G-G-G-G)-A hexads and coordinated monovalent cations
-
Kettani A., Gorin A., Majumdar A., Hermann T., Skripkin E., Zhao H., Jones R., Patel D.J. A dimeric DNA interface stabilized by stacked A-(G-G-G-G)-A hexads and coordinated monovalent cations. J. Mol. Biol. 297:2000;627-644.
-
(2000)
J. Mol. Biol.
, vol.297
, pp. 627-644
-
-
Kettani, A.1
Gorin, A.2
Majumdar, A.3
Hermann, T.4
Skripkin, E.5
Zhao, H.6
Jones, R.7
Patel, D.J.8
-
19
-
-
0028024737
-
The high-resolution crystal structure of a parallel-stranded guanine tetraplex
-
Laughlan G., Murchie A.I.H., Norman D.G., Moore M.H., Moody P.C.E., Lilley D.M.J., Luisi B. The high-resolution crystal structure of a parallel-stranded guanine tetraplex. Science. 265:1994;520-524.
-
(1994)
Science
, vol.265
, pp. 520-524
-
-
Laughlan, G.1
Murchie, A.I.H.2
Norman, D.G.3
Moore, M.H.4
Moody, P.C.E.5
Lilley, D.M.J.6
Luisi, B.7
-
20
-
-
0036411968
-
A dimeric RNA quadruplex architecture comprised of two G:G(:A):G:G(:A) hexads, G:G:G:G tetrads and UUUU loops
-
Liu H., Matsugami A., Katahira M., Uesugi S. A dimeric RNA quadruplex architecture comprised of two G:G(:A):G:G(:A) hexads, G:G:G:G tetrads and UUUU loops. J. Mol. Biol. 322:2002;955-970.
-
(2002)
J. Mol. Biol.
, vol.322
, pp. 955-970
-
-
Liu, H.1
Matsugami, A.2
Katahira, M.3
Uesugi, S.4
-
21
-
-
0035914469
-
An intramolecular quadruplex of (GGA)4 triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction
-
Matsugami A., Ouhashi K., Kanagawa M., Liu H., Kanagawa S., Uesugi S., Katahira M. An intramolecular quadruplex of (GGA)4 triplet repeat DNA with a G:G:G:G tetrad and a G(:A):G(:A):G(:A):G heptad, and its dimeric interaction. J. Mol. Biol. 313:2001;255-269.
-
(2001)
J. Mol. Biol.
, vol.313
, pp. 255-269
-
-
Matsugami, A.1
Ouhashi, K.2
Kanagawa, M.3
Liu, H.4
Kanagawa, S.5
Uesugi, S.6
Katahira, M.7
-
22
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski Z., Minor W. Processing of X-ray diffraction data collected in oscillation mode. Methods Enzymol. 276:1997;307-326.
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
23
-
-
0037142071
-
Crystal structure of parallel quadruplexes from human telomeric DNA
-
Parkinson G.N., Lee M.P.H., Neidle S. Crystal structure of parallel quadruplexes from human telomeric DNA. Nature. 417:2002;876-880.
-
(2002)
Nature
, vol.417
, pp. 876-880
-
-
Parkinson, G.N.1
Lee, M.P.H.2
Neidle, S.3
-
24
-
-
0002216849
-
Structures of guanine-rich and cytosine-rich quadruplexes formed in vitro by telomeric, centromeric, and triplet repeat disease DNA sequences
-
S. Neidle. Oxford: Oxford University Press. a 389-453.pp
-
Patel D.J., Bouaziz S., Kettani A., Wang Y. Structures of guanine-rich and cytosine-rich quadruplexes formed in vitro by telomeric, centromeric, and triplet repeat disease DNA sequences. Neidle S. Oxford Handbook of Nucleic Acid Structure. 1999;Oxford University Press, Oxford. a 389-453.pp.
-
(1999)
Oxford Handbook of Nucleic Acid Structure
-
-
Patel, D.J.1
Bouaziz, S.2
Kettani, A.3
Wang, Y.4
-
25
-
-
0033215357
-
NMR studies on truncated sequences of human telomeric DNA: Observation of a novel A-tetrad
-
b
-
Patel P.K., Koti A.S.R., Hosur R.V. NMR studies on truncated sequences of human telomeric DNA. observation of a novel A-tetrad Nucleic Acids Res. 27:1999;3836-3843. b.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 3836-3843
-
-
Patel, P.K.1
Koti, A.S.R.2
Hosur, R.V.3
-
26
-
-
0031576353
-
The crystal structure of a parallel-stranded guanine tetraplex at 0.95 Å resolution
-
Phillips K., Dauter Z., Murchie A.I.H., Lilley D.M.J., Luisi B. The crystal structure of a parallel-stranded guanine tetraplex at 0.95 Å resolution. J. Mol. Biol. 273:1997;171-182.
-
(1997)
J. Mol. Biol.
, vol.273
, pp. 171-182
-
-
Phillips, K.1
Dauter, Z.2
Murchie, A.I.H.3
Lilley, D.M.J.4
Luisi, B.5
-
27
-
-
0037213906
-
Sequences downstream of the 5′ splice donor site are required for both packaging and dimerization of human immunodeficiency virus type 1 RNA
-
Russell R.S., Hu J., Beriault V., Mouland A.J., Kleiman L., Wainberg M.A., Liang C. Sequences downstream of the 5′ splice donor site are required for both packaging and dimerization of human immunodeficiency virus type 1 RNA. J. Virol. 77:2003;84-96.
-
(2003)
J. Virol.
, vol.77
, pp. 84-96
-
-
Russell, R.S.1
Hu, J.2
Beriault, V.3
Mouland, A.J.4
Kleiman, L.5
Wainberg, M.A.6
Liang, C.7
-
29
-
-
0035801393
-
The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif
-
Schaeffer C., Bardoni B., Mandel J.-L., Ehresmann B., Ehresmann C., Moine H. The fragile X mental retardation protein binds specifically to its mRNA via a purine quartet motif. EMBO J. 20:2001;4803-4813.
-
(2001)
EMBO J.
, vol.20
, pp. 4803-4813
-
-
Schaeffer, C.1
Bardoni, B.2
Mandel, J.-L.3
Ehresmann, B.4
Ehresmann, C.5
Moine, H.6
-
30
-
-
14344275144
-
Biological aspects of DNA/RNA quadruplexes
-
Shafer R.H., Smirnov I. Biological aspects of DNA/RNA quadruplexes. Biopolymers. 56:2001;209-227.
-
(2001)
Biopolymers
, vol.56
, pp. 209-227
-
-
Shafer, R.H.1
Smirnov, I.2
-
32
-
-
0027533742
-
Evidence for interstrand quadruplex formation in the dimerization of human immunodeficiency virus 1 genomic RNA
-
Sundquist W.I., Heaphy S. Evidence for interstrand quadruplex formation in the dimerization of human immunodeficiency virus 1 genomic RNA. Proc. Natl. Acad. Sci. USA. 90:1993;3393-3397.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3393-3397
-
-
Sundquist, W.I.1
Heaphy, S.2
-
33
-
-
0038057893
-
-
Los Alamos, NM: Los Alamos National Laboratory
-
Terwilliger T. SOLVE/RESOLVE Manual. 2001;Los Alamos National Laboratory, Los Alamos, NM.
-
(2001)
SOLVE/RESOLVE Manual
-
-
Terwilliger, T.1
-
35
-
-
0024787884
-
Monovalent cation-induced structure of telomeric DNA: The G-quartet model
-
Williamson J.R., Raghuraman M.K., Cech T.R. Monovalent cation-induced structure of telomeric DNA. the G-quartet model Cell. 59:1989;871-880.
-
(1989)
Cell
, vol.59
, pp. 871-880
-
-
Williamson, J.R.1
Raghuraman, M.K.2
Cech, T.R.3
-
36
-
-
0030731928
-
Normal human chromosomes have long G-rich telomeric overhangs at one end
-
Wright W.E., Tesmer V.M., Huffman K.E., Levene S.D., Shay J.W. Normal human chromosomes have long G-rich telomeric overhangs at one end. Genes Dev. 11:1997;2801-2809.
-
(1997)
Genes Dev.
, vol.11
, pp. 2801-2809
-
-
Wright, W.E.1
Tesmer, V.M.2
Huffman, K.E.3
Levene, S.D.4
Shay, J.W.5
-
37
-
-
0035979714
-
V-shaped scaffold: A new architectural motif identified in an A-(G-G-G-G) pentad-containing dimeric DNA quadruplex involving stacked G(anti)-G(anti)-G(anti)-G(syn) tetrads
-
Zhang N., Corin A., Majumdar A., Kettani A., Chernichenko N., Skripkin E., Patel D.J. V-shaped scaffold. a new architectural motif identified in an A-(G-G-G-G) pentad-containing dimeric DNA quadruplex involving stacked G(anti)-G(anti)-G(anti)-G(syn) tetrads J. Mol. Biol. 311:2001;1063-1079.
-
(2001)
J. Mol. Biol.
, vol.311
, pp. 1063-1079
-
-
Zhang, N.1
Corin, A.2
Majumdar, A.3
Kettani, A.4
Chernichenko, N.5
Skripkin, E.6
Patel, D.J.7
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