Design and characterization of a homodimeric antiparallel coiled coil

Journal of the American Chemical Society

Volumn 125, Issue 25, 2003, Pages 7518-7519

  Gurnon, Daniel G ^a   Whitaker, Jennifer A ^a   Oakley, Martha G ^a  

^a INDIANA UNIVERSITY   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ALANINE; AMINO ACID; ARGININE; ASPARAGINE; DIMER; GLUTAMIC ACID; LYSINE; PROTEIN;

ALPHA HELIX; AMINO ACID SEQUENCE; ARTICLE; COILED COIL; HYDROPHOBICITY; OLIGOMERIZATION; PROTEIN MOTIF; PROTEIN STRUCTURE;

CIRCULAR DICHROISM; DIMERIZATION; HYDROPHOBICITY; PROTEIN STRUCTURE, SECONDARY; PROTEIN STRUCTURE, TERTIARY; PROTEINS; THERMODYNAMICS;

EID: 0038546882     PISSN: 00027863     EISSN: None     Source Type: Journal    
DOI: 10.1021/ja0357590     Document Type: Article

References (34)

1. Lupas, A. Trends Biochem. Sci. 1996, 21, 375-382.
2. Burkhard, P.; Strelkov, S. V.; Stetefeld, J. Trends Cell Biol. 2001, 11, 82-88.
3. Vinson, C.; Myakishev, M.; Acharya, A.; Mir, A. A.; Moll, J. R.; Bonovich, M. Mol. Cell. Biol. 2002, 22, 6321-6335.
4. Kohn, W. D.; Hodges, R. S. Trends Biotechnol. 1998, 16, 379-389.
5. Muller, K. M.; Arndt, K. M.; Alber, T. Methods Enzymol. 2000, 328, 261-282.
6. Rieker, J. D.; Hu, J. C. Methods Enzymol. 2000, 328, 282-296.
7. Chao, H. M.; Bautista, D. L.; Litowski, J.; Irvin, R. T.; Hodges, R. S. J. Chromatogr. B 1998, 715, 307-329.
8. Eckert, D. M.; Kim, P. S. Annu. Rev. Biochem. 2001, 70, 777-810.
9. Petka, W. A.; Hardin, J. L.; McGrath, K. P.; Wirtz, D.; Tirrell, D. A. Science 1998, 281, 389-392.
10. Wang, C.; Stewart, R. J.; Kopecek, J. Nature 1999, 397, 417-420.
11. Oakley, M. G.; Hollenbeck, J. J. Curr. Opin. Struct. Biol. 2001, 11, 450-457.
12. Betz, S. F.; Bryson, J. W.; DeGrado, W. F. Curr. Opin. Struct. Biol. 1995, 5, 457-463.
13. Knappenberger, J. A.; Smith, J. E.; Thorpe, S. H.; Zitzewitz, J. A.; Matthews, C. R. J. Mol. Biol. 2002, 321, 1-6.
14. Lumb, K. J.; Kim, P. S. Biochemistry 1995, 34, 8642-8648.
15. O'Shea, E. K.; Lumb, K. J.; Kim, P. S. Curr. Biol. 1993, 3, 658-667.
16. Oakley, M. G.; Kim, P. S. Biochemistry 1998, 37, 12603-12610.
17. Harbury, P. B.; Zhang, T.; Kim, P. S.; Alber, T. Science 1993, 262, 1401-1407.
18. Acharya, A.; Ruvinov, S. B.; Gal, J.; Moll, J. R.; Vinson, C. Biochemistry 2002, 41, 14122-14131.
19. O'Shea, E. K.; Klemm, J. D.; Kim, P. S.; Alber, T. Science 1991, 254, 539-544.
20. McClain, D. L.; Gurnon, D. G.; Oakley, M. G. J. Mol. Biol. 2002, 324, 257-270.
21. Campbell, K. M.; Lumb, K. J. Biochemistry 2002, 41, 7169-7175.
22. Cusack, S.; Berthet-Colominas, C.; Hartlein, M.; Nassar, N.; Leberman, R. Nature 1990, 347, 249-255.
23. Zuccola, H. J.; Rozzelle, J. E.; Lemon, S. M.; Erickson, B. W.; Hogle, J. M. Structure 1998, 6, 821-830.
24. DeGrado, W. F.; Summa, C. M.; Pavone, V.; Nastri, F.; Lombardi, A. Annu. Rev. Biochem. 1999, 68, 779-819.
25. Schnarr, N. A.; Kennan, A. J. J. Am. Chem. Soc. 2003, 125, 667-671.
26. McClain, D. L.; Binfet, J. P.; Oakley, M. G. J. Mol. Biol. 2001, 313, 371-383.
27. McClain, D. L.; Woods, H. L.; Oakley, M. G. J. Am. Chem. Soc. 2001, 123, 3151-3152.
28. Schnarr, N. A.; Kennan, A. J. J. Am. Chem. Soc. 2002, 124, 9779-9783.
29. Gernert, K. M.; Surles, M. C.; Labean, T. H.; Richardson, J. S.; Richardson, D. C. Protein Sci. 1995, 4, 2252-2260.
30. Wagschal, K.; Tripet, B.; Lavigne, P.; Mant, C.; Hodges, R. S. Protein Sci. 1999, 8, 2312-2329.
31. See Supporting Information.
32. A four-heptad construct with design features similar to those of APH was not stable at room temperature (see Supporting Information).
33. O'Shea, E. K.; Rutkowski, R.; Kim, P. S. Science 1989, 243, 538-542.
34. Holmes, T. C. Trends Biotechnol. 2002, 20, 16-21.