TagA, a putative serine protease/ABC transporter of Dictyostelium that is required for cell fate determination at the onset of development

Development

Volumn 130, Issue 13, 2003, Pages 2953-2965

  Good, J Randall ^a,b   Cabral, Matthew ^a   Sharma, Sujata ^a   Yang, Jun ^a   Van Driessche, Nancy ^a   Shaw, Chad A ^a   Shaulsky, Gad ^a   Kuspa, Adam ^a  

^a BAYLOR COLLEGE OF MEDICINE   (United States)

^b INSTITUTE FOR DEFENSE ANALYSES   (United States)

Author keywords

Cell cycle; Cell fate; Dictyostelium; Differentiation; Starvation

Indexed keywords

ABC TRANSPORTER; MESSENGER RNA; PROTEIN TAGA; SERINE PROTEINASE; UNCLASSIFIED DRUG;

ARTICLE; CELL DIFFERENTIATION; CELL FATE; CELL MUTANT; CELL POPULATION; CELL VIABILITY; CONTROLLED STUDY; DEVELOPMENTAL STAGE; DICTYOSTELIUM; FRUITING BODY; GENE ACTIVATION; GENE EXPRESSION; GENE EXPRESSION PROFILING; GENE IDENTIFICATION; GENETIC CODE; GENETIC TRANSCRIPTION; NONHUMAN; PHENOTYPE; PREDICTION; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN FUNCTION; SPOROGENESIS; WILD TYPE;

AMINO ACID SEQUENCE; ANIMALS; ATP-BINDING CASSETTE TRANSPORTERS; CELL DIFFERENTIATION; DICTYOSTELIUM; GENE EXPRESSION PROFILING; GENE EXPRESSION REGULATION, DEVELOPMENTAL; GENES, REPORTER; HUMANS; MOLECULAR SEQUENCE DATA; MORPHOGENESIS; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PHENOTYPE; PROTEIN STRUCTURE, TERTIARY; PROTOZOAN PROTEINS; RECOMBINANT FUSION PROTEINS; SEQUENCE ALIGNMENT; SERINE ENDOPEPTIDASES; TRANSCRIPTION, GENETIC;

DICTYOSTELIUM; EUKARYOTA;

EID: 0038444692     PISSN: 09501991     EISSN: None     Source Type: Journal    
DOI: 10.1242/dev.00523     Document Type: Article

References (58)

1. Adachi, H., Hasebe, T., Yoshinaga, K., Ohta, T. and Sutoh, K. (1994). Isolation of Dictyostelium discoideum cytokinesis mutants by restriction enzyme-mediated integration of the blasticidin s resistance marker. Biochem. Biophys. Res. Commun. 205, 1808-1814.
2. Ambudkar, S. V. and Gottesman, M. M., eds. (1998). ABC transporters: biochemical, cellular, and molecular aspects. Methods Enzymol. 292, 1-853.
3. Anjard, C., Zeng, C., Loomis, W. F. and Nellen, W. (1998). Signal transduction pathways leading to spore differentiation in Dictyostelium discoideum. Dev. Biol. 193, 146-155.
4. Anjard, C., the Dictyostelium Sequencing Consortium and Loomis, W. F. (2002). Evolution of the ABC transporters of Dictyostelium. Eukaryotic Cell 1, 643-652.
5. 2+ and development in Dictyostelium discoideum. Int. J. Dev. Biol. 45, 405-414.
6. Bai, C. and Elledge, S. J. (1997). Gene identification using the yeast two-hybrid system. Meth. Enzymol. 283, 141-156.
7. Chang, W. T., Newell, P. C. and Gross, J. D. (1996). Identification of the cell fate gene stalky in Dictyostelium. Cell 87, 471-481.
8. Clay, J. L., Ammann, R. R. and Gomer, R. H. (1995). Initial cell-type choice in a simple eukaryote: Cell-autonomous or morphogen-gradient dependent? Dev. Biol. 172, 665-674.
9. Detmers, F. J., Lanfermeijer, F. C. and Poolman, B. (2001). Peptides and ATP binding cassette peptide transporters. Res Microbiol. 152, 245-258.
10. Detterbeck, S., Morandini, P., Wetterauer, B., Bachmair, A., Fischer, K. and MacWilliams, H. K. (1994). The 'prespore-like cells' of Dictyostelium have ceased to express a prespore gene: analysis using short-lived beta-galactosidases as reporters. Development 120, 2847-2855.
11. Early, A. E., Gaskell, M. J., Traynor, D. and Williams, J. G. (1993). Two distinct populations of prestalk cells within the tip of the migratory Dictyostelium slug with differing fates at culmination. Development 118, 353-362.
12. Fosnaugh, K. L. and Loomis, W. F. (1991). Coordinate regulation of the spore coat genes in Dictyostelium discoideum. Dev. Genet. 12, 123-132.
13. Fosnaugh, K. L. and Loomis, W. F. (1993). Enhancer regions responsible for temporal and cell-type-specific expression of a spore coat gene in Dictyostelium. Dev. Biol. 157, 38-48.
14. Gomer, R. H. and Firtel, R. A. (1987). Cell-autonomous determination of cell-type choice in Dictyostelium development by cell-cycle phase. Science 237, 758-762.
15. Good, J. R. and Kuspa, A. (2000). Evidence that a cell-type-specific efflux pump regulates cell differentiation in Dictyostelium. Dev. Biol. 220, 53-61.
16. Gross, J. D., Bradbury, J., Kay, R. R. and Peacey, M. J. (1983). Intracellular pH and the control of cell differentiation in Dictyostelium discoideum. Nature 303, 244-245.
17. Haberstroh, L. and Firtel, R. A. (1990). A spatial gradient of expresssion of a cAMP-regulated prespore cell type-specific gene in Dictyostelium. Genes Dev. 4, 596-612.
18. Harrington, B. J. and Raper, K. B. (1968). Use of a fluorescent brightener to demonstrate cellulose in the cellular slime mold. J. Appl. Microbiol. 16, 106-113.
19. Harwood, A. J. and Drury, L. (1990). New vectors for expression of the E. coli lacZ gene in Dictyostelium. Nucleic Acids Res. 18, 4292.
20. Harwood, A. J., Early, A. and Williams, J. G. (1993). A repressor controls the timing and spatial localisation of stalk cell-specific gene expression in Dictyostelium. Development 118, 1041-1048.
21. Harwood, A. J., Plyte, S. E., Woodgett, J., Strutt, H. and Kay, R. R. (1995). Glycogen synthase kinase 3 regulates cell fate in Dictyostelium. Cell 80, 139-148.
22. Hughes, T. R., Marton, M. J., Jones, A. R., Roberts, C. J., Stoughton, R., Armour, C. D., Bennett, H. A., Coffey, E., Dai, H., He, Y. D. et al. (2000). Functional discovery via a compendium of expression profiles. Cell 102, 109-126.
23. Iranfar, N., Fuller, D., Sasik, R., Hwa, T., Laub, M. and Loomis, W. F. (2001). Expression patterns of cell-type-specific genes in Dictyostelium. Mol. Biol. Cell 12, 2590-2600.
24. Johnstone, R. W., Cretney, E. and Smyth, M. J. (1999). P-glycoprotein protects leukemia cells against caspase-dependent, but not caspase-independent, cell death. Blood 93, 1075-1085.
25. Johnstone, R. W., Ruelli, A. A. and Smyth, M. J. (2000a). Multiple physiological functions for multidrug transporter P-glycoprotein? Trends Biochem. Sci. 25, 1-6.
26. Johnstone, R. W., Ruefli, A. A., Tainton, K. M. and Smyth, M. J. (2000b). A role for P-glycoprotein in regulating cell death. Leuk. Lymphoma 38, 1-11.
27. Kay, R. R. (1998). The biosynthesis of differentiation-inducing factor, a chlorinated signal molecule regulating Dictyostelium development. J. Biol. Chem. 273, 2669-2675.
28. Kessin, R. H. (2001). Dictyostelium: Evolution, cell biology, and the development of multicellularity. New York: Cambridge University Press.
29. Kim, S. K., Lund, J., Kiraly, M., Duke, K., Jiang, M., Stuart, J. M., Eizinger, A., Wylie, B. N. and Davidson, G. S. (2001). A gene expression map for Caenorhabditis elegans. Science 293, 2087-2092.
30. Knecht, D. A., Cohen, S. M. and Loomis, W. F. (1986). Developmental regulation of Dictyostelium discoideum actin gene fusions carried on low-copy and high-copy transformation vectors. Mol. Cell. Biol. 6, 3973-3983.
31. Kuchler, K. and Thorner, J. (1992). Secretion of peptides and proteins lacking hydrophobic signal sequences: the role of adenosine triphosphate-driven membrane translocators. Endocrinol. Rev. 13, 499-514.
32. Leach, C. K., Ashworth, J. M. and Garrod, D. R. (1973). Cell sorting out during the differentiation of mixtures of metabolically distinct populations of Dictyostelium discoideum. J. Embryol. Exp. Morphol. 29, 647-661.
33. Lindsey, K., Casson, S. and Chilley, P. (2002). Peptides: new signalling molecules in plants. Trends Plant Sci. 7, 78-83.
34. Ma, Y., Erkner, A., Gong, R., Yao, S., Thipale, J., Basler, K. and Beachy, P. (2002). Hedgehog-mediated patterning of the mammalian embryo requires transporter-like function of Dispatched. Cell 111, 63.
35. Maeda, Y. (1997). Cellular and molecular mechanisms of the transition from growth to differentiation in Dictyostelium cells. In Dictyostelium - A Model System for Cell and Developmental Biology, pp. 207-218. Tokyo, Japan: Universal Academy Press.
36. Maeda, Y. and Maeda, M. (1974). Heterogeneity of the cell population of the cellular slime mold Dictyostelium discoideum before aggregation, and its relation to the subsequent locations of the cells. Exp. Cell Res. 84, 88-94.
37. Manstein, D. J. and Hunt, D. M. (1995). Overexpression of myosin motor domains in Dictyostelium: Screening of transformants and purification of the affinity tagged protein. J. Muscle Res. Cell Motil. 16, 325-332.
38. Nellen, W. and Firtel, R. A. (1985). High-copy-number transformants and co-transformation in Dictyostelium. Gene 39, 155-163.
39. Richardson, D. L. and Loomis, W. F. (1992). Disruption of the sporulation-specific gene spia in Dictyostelium discoideum leads to spore instability. Genes Dev. 6, 1058-1070.
40. Richardson, D. L., Loomis, W. F. and Kimmel, A. R. (1994). Progression of an inductive signal activates sporulation in Dictyostelium discoideum. Development 120, 2891-2900.
41. Sharom, F. J., Lu, P., Liu, R. and Yu, X. (1998). Linear and cyclic peptides as substrates and modulators of P-glycoprotein: peptide binding and effects on drug transport and accumulation. Biochem. J. 333, 621-630.
42. Shaulsky, G. and Loomis, W. F. (1993). Cell type regulation in response to expression of ricin-A in Dictyostelium. Dev. Biol. 160, 85-98.
43. Shaulsky, G. and Loomis, W. F. (1996). Initial cell type divergence in Dictyostelium is independent of DIF- 1. Dev. Biol. 174, 214-220.
44. Shaulsky, G., Kuspa, A. and Loomis, W. F. (1995). A multidrug resistance transporter serine protease gene is required for prestalk specialization in Dictyostelium. Genes Devel. 9, 1111-1122.
45. Smyth, M. J., Krasovskis, E., Sutton, V. R., Johnstone, R. W. (1998). The drug efflux protein, P-glycoprotein, additionally protects drug-resistant tumor cells from multiple forms of caspase-dependent apoptosis. Proc. Natl. Acad. Sci., USA 95, 7024-7029.
46. Solomon, J. M., Lazazzera, B. A. and Grossman, A. D. (1996). Purification and characterization of an extracellular peptide factor that affects two different developmental pathways in Bacillus subtilis. Genes Dev. 10, 2014-2024.
47. Souza, G. M., Lu, S. and Kuspa, A. (1998). YakA, a protein kinase required for the transition from growth to development in Dictyostelium. Development 125, 2291-2302.
48. Stacey, G., Koh, S., Granger, C. and Becker, J. M. (2002). Peptide transport in plants. Trends Plant Sci. 7, 257-263.
49. Sussman, M. (1987). Cultivation and synchronous morphogenesis of Dictyostelium under controlled experimental conditions. Methods Cell Biol. 28, 9-29.
50. Taglicht, D. and Michaelis, S. (1998). Saccharomyces cerevisiae ABC proteins and their relevance to human health and disease. Methods Enzymol. 292, 130-162.
51. Thompson, C. R. and Kay, R. R. (2000). Cell fate choice in Dictyostelium: intrinsic biases modulate sensitivity to DIF signailing. Dev. Biol. 227, 56-64.
52. Van Driessche, N., Shaw, C., Katoh, M., Morio, T., Sucgang, R., lbarra, M., Kuwayama, H., Saito, T., Urushihara, H., Maeda, M., Takeuchi, I., Ochiai, H., Eaton, W., Tollett, J., Halter, J., Kuspa, A., Tanaka, Y., Shaulsky, G. (2002). A transcriptional profile of multicellular development in Dictyostelium discoideum. Development 129, 1543-1552.
53. Wang, B. and Kuspa, A. (2002). CulB, a putative ubiquitin ligase subunit, regulates prestalk cell differentiation and morphogenesis in Dictyostelium. Eukaryotic Cell 1, 126-136.
54. Williams, J. G., Duffy, K. T., Lane, D. P., McRobbie, S. J., Harwood, A. J., Traynor, D., Kay, R. R. and Jermyn, K. A. (1989). Origins of the prestalk-prespore pattern in Dictyostelium development. Cell 59, 1157-1163.
55. Williams, J. G. (1997). Prestalk and stalk heterogeneity in Dictyostelium. In Dictyostelium - A Model System for Cell and Developmental Biology, pp. 293-304. Tokyo, Japan: Universal Academy Press.
56. Wood, S. A., Ammann, R. R., Brock, D. A., Li, L., Spann, T. and Gomer, R. H. (1996). RtoA links initial cell type choice to the cell cycle in Dictyostelium. Development 122, 3677-3685.
57. Yang, Y. H., Dudoit, S., Lu, P., Lin, D. M., Peng, V., Ngai, J. and Speed, T. P. (2002). Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation. Nucleic Acids Res. 30, E15.
58. Zhou, S., Schuetz, J. D., Bunting, K. D., Colapietro, A., Sampath, J., Morris, J. J., Irina Lagutina, L., Grosveld, G. C., Osawa, M., Nakauchi, H. and Sorrentino, B. P. (2001). The ABC transporter Bcrp1/ABCG2 is expressed in a wide variety of stem cells and is a molecular determinant of the side-population phenotype. Nat. Med. 7, 1028-1034.