Sequences and replication of genomes of the archaeal rudiviruses SIRV1 and SIRV2: Relationships to the archaeal lipothrixvirus SIFV and some eukaryal viruses

Virology

Volumn 291, Issue 2, 2001, Pages 226-234

  Peng, Xu ^a   Blum, Helmut ^b   She, Qunxin ^a   Mallok, Sylvia ^b   Brügger, Kim ^a   Garrett, Roger A ^a   Zillig, Wolfram ^c   Prangishvili, David ^d  

^a UNIVERSITY OF COPENHAGEN   (Denmark)

^b UNIVERSITY OF MUNICH   (Germany)

^c MAX PLANCK INSTITUTE OF BIOCHEMISTRY   (Germany)

^d UNIVERSITY OF REGENSBURG   (Germany)

Author keywords

Archaea; Genome; Recombination; Replication; Virus; Virus evolution

Indexed keywords

DEOXYURIDINE TRIPHOSPHATE PYROPHOSPHATASE; DNA POLYMERASE; DOUBLE STRANDED DNA;

ARTICLE; DNA VIRUS; GENE SEQUENCE; HOLLIDAY JUNCTION; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; PRIORITY JOURNAL; RUDIVIRUS; SULFOLOBUS; VIRUS CHARACTERIZATION; VIRUS GENE; VIRUS GENOME; VIRUS ISOLATION; VIRUS RECOMBINATION; VIRUS REPLICATION;

AFRICAN SWINE FEVER VIRUS; ARCHAEA; CHLORELLA VIRUS; CLASSICAL SWINE FEVER VIRUS; EUKARYOTA; LIPOTHRIXVIRIDAE; LIPOTHRIXVIRUS; RUDIVIRIDAE; RUDIVIRUS; SULFOLOBUS; SUS SCROFA;

EID: 0035694680     PISSN: 00426822     EISSN: None     Source Type: Journal    
DOI: 10.1006/viro.2001.1190     Document Type: Article

References (51)

1. Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
2. A novel lipothrixvirus, SIFV, of the extremely thermophilic crenarchaeon Sulfolobus
3. SNDV, a novel virus of the extremely thermophilic and acidophilic archaeon Sulfolobus
4. Evolution and horizontal transfer of dUTPase-encoding genes in viruses and their hosts
5. Incompletely base-paired flip-flop terminal loops link the two DNA strands of the vaccinia virus genomes into one uninterrupted polynucleotide chain
6. Complete genomic sequence of the Amsacta moorei entomopox virus: Analysis and comparison with other pox viruses
7. Holliday junction resolving enzymes of archaeal viruses SIRV1 and SIRV2
8. The linear genome of the archaeal virus SIRV1 has features in common with genomes of eukaryal viruses
9. The unusual conformation adopted by the adenine tracts in kinetoplast DNA
10. Enzymatic multiplex DNA sequencing
11. Multiplex DNA sequencing
12. Genetic variation and multigene families in African swine fever virus
13. Identification of a variable region of the African swine fever virus genome that has undergone separate DNA rearrangements leading to expansion of minisatellite-like sequences
14. Bacterialtype DNA Holliday junction resolvases in eukaryotic viruses
15. Hairpin loop structure of African swine fever virus DNA
16. The immunity-conferring plasmid pHL from Halobacterium salinarium phage φH: Nucleotide sequence and transcription
17. The long evolutionary reach of viruses
18. Evolution of T4-related phages
19. Two Holliday junction resolving enzymes in Sulfolobus solfataricus
20. Widespread protein sequence similarities: Origins of Escherichia coli genes
21. Sequence and transcriptional analyses of the fish retroviruses walleye epidermal hyperplasia virus types 1 and 2: Evidence for a gene duplication
22. Resolving the relationships of resolving enzymes
23. Stress genes and proteins in the archaea
24. Mutational analysis of the resolution sequence of vaccinia virus DNA: Essential sequence consists of two separate AT-rich regions highly conserved among pox viruses
25. Poxviruses and their replication
26. Genetic variation of Chlorella viruses: Variable regions localized on the CVK2 genomic DNA
27. Complete nucleotide sequence of the virus SSV1 of the archaebacterium Sulfolobus shibatae
28. Molecular analysis of Methanobacterium phage ψM2
29. Biochemical and phylogenetic characterization of the dUTPase from the archaeal virus SIRV
30. A novel virus family, the Rudiviridae: Structure, virus-host interactions and genome variability of the Sulfolobus viruses SIRV1 and SIRV2
31. Viruses of the extremely thermophilic archaeon Sulfolobus
32. Replication of African swine fever virus in infected cells
33. Genetic profile of pNOB8 from Sulfolobus: The first conjugative plasmid from an archaeon
34. The complete genome of the Crenarchaeote Sulfolobus solfataricus P2
35. In vitro resolution of pox virus replicative intermediates into linear minichromosomes with hairpin termini by a virally induced Holliday junction endonuclease
36. Blast 2 sequences - A new tool for comparing protein and nucleotide sequences
37. DNA sequence homology between the terminal inverted repeats of Shope fibroma virus and an endogenous cellular plasmid species
38. Tumorigenic pox viruses: Fine analysis of the recombination junctions in malignant rabbit fibroma virus, a recombinant between Shope fibroma virus and myxoma virus
39. Phylogenetic structure of the prokaryotic domain: The primary kingdoms
40. Predictions of gene family distributions in microbial genomes: Evolution by gene duplication and modification
41. Structure of a Gelasinopora linear plasmid closely related to the kalilo plasmid of Neurospora intermedia
42. Hairpin loop structure at the termini of the Chlorella virus PBCV-1 genome
43. Genetic elements in the extremely thermophilic archaeon Sulfolobus
44. Screening for Sulfolobales, their plasmids, and their viruses in Icelandic sulfataras
45. Viruses, plasmids and other genetic elements of thermophilic and hyperthermophilic archaea
46. Viruses of archaebacteria