-
1
-
-
0020696905
-
The gene structure and replication of influenza virus
-
Lamb,R.A. and Choppin,P.W. (1983) The gene structure and replication of influenza virus. Annu. Rev. Biochem., 52, 467-506.
-
(1983)
Annu. Rev. Biochem.
, vol.52
, pp. 467-506
-
-
Lamb, R.A.1
Choppin, P.W.2
-
2
-
-
0028245360
-
The influenza virus panhandle is involved in the initiation of transcription
-
Fodor,E., Pritlove,D.C. and Brownlee,G.G. (1994) The influenza virus panhandle is involved in the initiation of transcription. J. Virol., 68, 4092-4096.
-
(1994)
J. Virol.
, vol.68
, pp. 4092-4096
-
-
Fodor, E.1
Pritlove, D.C.2
Brownlee, G.G.3
-
3
-
-
0031667216
-
The RNA polymerase of influenza virus, bound to the 5′ end of virion RNA, acts in cis to polyadenylate mRNA
-
Poon,L.L., Pritlove,D.C., Sharps,J. and Brownlee,G.G. (1998) The RNA polymerase of influenza virus, bound to the 5′ end of virion RNA, acts in cis to polyadenylate mRNA. J. Virol., 72, 8214-8219.
-
(1998)
J. Virol.
, vol.72
, pp. 8214-8219
-
-
Poon, L.L.1
Pritlove, D.C.2
Sharps, J.3
Brownlee, G.G.4
-
4
-
-
0034957221
-
The packaging signal of influenza viral RNA molecules
-
Tchatalbachev,S., Flick,R. and Hobom,G. (2001) The packaging signal of influenza viral RNA molecules. RNA, 7, 979-989.
-
(2001)
RNA
, vol.7
, pp. 979-989
-
-
Tchatalbachev, S.1
Flick, R.2
Hobom, G.3
-
5
-
-
0029853503
-
Promoter elements in the influenza vRNA terminal structure
-
Flick,R., Neumann,G., Hoffmann,E., Neumeier,E. and Hobom,G. (1996) Promoter elements in the influenza vRNA terminal structure. RNA, 2, 1046-1057.
-
(1996)
RNA
, vol.2
, pp. 1046-1057
-
-
Flick, R.1
Neumann, G.2
Hoffmann, E.3
Neumeier, E.4
Hobom, G.5
-
6
-
-
0026091023
-
Involvement of the influenza A virus PB2 protein in the regulation of viral gene expression
-
Mukaigawa,J., Hatada,E., Fukuda,R. and Shimizu,K. (1991) Involvement of the influenza A virus PB2 protein in the regulation of viral gene expression. J. Gen. Virol., 72, 2661-2670.
-
(1991)
J. Gen. Virol.
, vol.72
, pp. 2661-2670
-
-
Mukaigawa, J.1
Hatada, E.2
Fukuda, R.3
Shimizu, K.4
-
7
-
-
0029150892
-
In vitro transcription and polymerase binding studies of the termini of influenza A virus cRNA: Evidence for a cRNA panhandle
-
Pritlove,D.C., Fodor,E., Seong,B.L. and Brownlee,G.G. (1995) In vitro transcription and polymerase binding studies of the termini of influenza A virus cRNA: evidence for a cRNA panhandle. J. Gen. Virol., 76, 2205-2213.
-
(1995)
J. Gen. Virol.
, vol.76
, pp. 2205-2213
-
-
Pritlove, D.C.1
Fodor, E.2
Seong, B.L.3
Brownlee, G.G.4
-
8
-
-
0036149945
-
Differential activation of influenza A virus endonuclease activity is dependent on multiple sequence differences between the virion RNA and cRNA promoters
-
Leahy,M.B., Zecchin,G. and Brownlee,G.G. (2002) Differential activation of influenza A virus endonuclease activity is dependent on multiple sequence differences between the virion RNA and cRNA promoters. J. Virol., 76, 2019-2023.
-
(2002)
J. Virol.
, vol.76
, pp. 2019-2023
-
-
Leahy, M.B.1
Zecchin, G.2
Brownlee, G.G.3
-
9
-
-
0035845528
-
Structural features of an influenza virus promoter and their implications for viral RNA synthesis
-
Bae,S.H., Cheong,H.K., Lee,J.H., Cheong,C., Kainosho,M. and Choi,B.S. (2001) Structural features of an influenza virus promoter and their implications for viral RNA synthesis. Proc. Natl Acad. Sci. USA, 98, 10602-10607.
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 10602-10607
-
-
Bae, S.H.1
Cheong, H.K.2
Lee, J.H.3
Cheong, C.4
Kainosho, M.5
Choi, B.S.6
-
10
-
-
0033105857
-
Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular modeling
-
Cheong,H.K., Cheong,C., Lee,Y.S., Seong,B.L. and Choi,B.S. (1999) Structure of influenza virus panhandle RNA studied by NMR spectroscopy and molecular modeling. Nucleic Acids Res., 27, 1392-1397.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 1392-1397
-
-
Cheong, H.K.1
Cheong, C.2
Lee, Y.S.3
Seong, B.L.4
Choi, B.S.5
-
11
-
-
0023651444
-
Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates
-
Milligan,J.F., Groebe,D.R., Witherell,G.W. and Uhlenbeck,O.C. (1987) Oligoribonucleotide synthesis using T7 RNA polymerase and synthetic DNA templates. Nucleic Acids Res., 15, 8783-8798.
-
(1987)
Nucleic Acids Res.
, vol.15
, pp. 8783-8798
-
-
Milligan, J.F.1
Groebe, D.R.2
Witherell, G.W.3
Uhlenbeck, O.C.4
-
12
-
-
0032827799
-
A simple and efficient method to reduce nontemplated nucleotide addition at the 3′ terminus of RNAs transcribed by T7 RNA polymerase
-
Kao,C., Zheng,M. and Rüdisser,S. (1999) A simple and efficient method to reduce nontemplated nucleotide addition at the 3′ terminus of RNAs transcribed by T7 RNA polymerase. RNA, 5, 1268-1272.
-
(1999)
RNA
, vol.5
, pp. 1268-1272
-
-
Kao, C.1
Zheng, M.2
Rüdisser, S.3
-
13
-
-
0032201222
-
3D HCCH-COSY-TOCSY experiment for the assignment of ribose and amino acid side chains in 13C labeled RNA and protein
-
Hu,W., Kakalis,L.T., Jiang,L., Jiang,F., Ye,X. and Majumdar,A. (1998) 3D HCCH-COSY-TOCSY experiment for the assignment of ribose and amino acid side chains in 13C labeled RNA and protein. J. Biomol. NMR, 12, 559-564.
-
(1998)
J. Biomol. NMR
, vol.12
, pp. 559-564
-
-
Hu, W.1
Kakalis, L.T.2
Jiang, L.3
Jiang, F.4
Ye, X.5
Majumdar, A.6
-
14
-
-
3543012707
-
Crystallography and NMR system: A new software suite for macromolecular structure determination
-
Brünger,A.T., Adams,P.D., Clore,G.M., DeLano,W.L., Gros,P., Grosse-Kunstleve, R,W, Jiang,J.S., Kuszewski,J., Nilges,M., Pannu,N.S., Read,R.J., Rice,L.M., Simonson,T. and Warren,G.L. (1998) Crystallography and NMR system: a new software suite for macromolecular structure determination. Acta Crystallogr. D Biol. Crystallogr., 54, 905-921.
-
(1998)
Acta Crystallogr. D Biol. Crystallogr.
, vol.54
, pp. 905-921
-
-
Brünger, A.T.1
Adams, P.D.2
Clore, G.M.3
DeLano, W.L.4
Gros, P.5
Grosse-Kunstleve, R.W.6
Jiang, J.S.7
Kuszewski, J.8
Nilges, M.9
Pannu, N.S.10
Read, R.J.11
Rice, L.M.12
Simonson, T.13
Warren, G.L.14
-
15
-
-
0030621858
-
Torsion-angle molecular dynamics as a new efficient tool for NMR structure calculation
-
Stein,E.G., Rice,L.M. and Brünger,A.T. (1997) Torsion-angle molecular dynamics as a new efficient tool for NMR structure calculation. J. Magn. Reson., 124, 154-164.
-
(1997)
J. Magn. Reson.
, vol.124
, pp. 154-164
-
-
Stein, E.G.1
Rice, L.M.2
Brünger, A.T.3
-
16
-
-
0030156432
-
NMR investigation of RNA structure
-
Varani,G., Aboul-ela,F. and Allain F.H. (1996) NMR investigation of RNA structure. Prog. NMR Spectrosc., 29, 51-127.
-
(1996)
Prog. NMR Spectrosc.
, vol.29
, pp. 51-127
-
-
Varani, G.1
Aboul-ela, F.2
Allain, F.H.3
-
17
-
-
0029082529
-
Structure of the P1 helix from group I self-splicing introns
-
Allain,F.H. and Varani,G. (1995) Structure of the P1 helix from group I self-splicing introns. J. Mol. Biol., 250, 333-353.
-
(1995)
J. Mol. Biol.
, vol.250
, pp. 333-353
-
-
Allain, F.H.1
Varani, G.2
-
18
-
-
0024058085
-
The definition of generalized helicoidal parameters and of axis curvature for irrregular nucleic acids
-
Lavery,R. and Sklenar,H. (1988) The definition of generalized helicoidal parameters and of axis curvature for irrregular nucleic acids. J. Biomol. Dyn., 6, 63-91.
-
(1988)
J. Biomol. Dyn.
, vol.6
, pp. 63-91
-
-
Lavery, R.1
Sklenar, H.2
-
19
-
-
0029852357
-
Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge
-
Aboul-ela,F., Karn,J. and Varani,G. (1996) Structure of HIV-1 TAR RNA in the absence of ligands reveals a novel conformation of the trinucleotide bulge. Nucleic Acids Res., 24, 3974-3981.
-
(1996)
Nucleic Acids Res.
, vol.24
, pp. 3974-3981
-
-
Aboul-ela, F.1
Karn, J.2
Varani, G.3
-
20
-
-
0034637111
-
The complete atomic structure of the large ribosomal subunit at 2.4Å resolution
-
Ban,N., Nissen,P., Hansen,J., Moore,P.B. and Steitz,T.A. (2000) The complete atomic structure of the large ribosomal subunit at 2.4Å resolution. Science, 289, 905-920.
-
(2000)
Science
, vol.289
, pp. 905-920
-
-
Ban, N.1
Nissen, P.2
Hansen, J.3
Moore, P.B.4
Steitz, T.A.5
-
21
-
-
0034699519
-
Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics
-
Carter,A.P, Clemons,W.M., Brodersen,D.E., Morgan-Warren,R.J., Wimberly,B.T. and Ramakrishnan,V. (2000) Functional insights from the structure of the 30S ribosomal subunit and its interactions with antibiotics. Nature, 407, 340-348.
-
(2000)
Nature
, vol.407
, pp. 340-348
-
-
Carter, A.P.1
Clemons, W.M.2
Brodersen, D.E.3
Morgan-Warren, R.J.4
Wimberly, B.T.5
Ramakrishnan, V.6
-
22
-
-
0034756750
-
Crystal structures of two forms of a 14mer RNA/DNA chimer duplex with double UU bulges: A novel intramolecular U*(A·U base triple
-
Deng,J., Xiong,Y., Sudarsanarkumar,C., Shi,K. and Sundaralingam,M. (2001) Crystal structures of two forms of a 14mer RNA/DNA chimer duplex with double UU bulges: a novel intramolecular U*(A·U) base triple. RNA, 7, 1425-1431
-
(2001)
RNA
, vol.7
, pp. 1425-1431
-
-
Deng, J.1
Xiong, Y.2
Sudarsanarkumar, C.3
Shi, K.4
Sundaralingam, M.5
-
23
-
-
0032727383
-
If the loop fits...
-
Frankel,A.D. (1999) If the loop fits.... Nature Struct. Biol., 12, 1081-1083.
-
(1999)
Nature Struct. Biol.
, vol.12
, pp. 1081-1083
-
-
Frankel, A.D.1
-
24
-
-
0033784534
-
Induced fit in RNA-protein recognition
-
Williamson,J.R. (2000) Induced fit in RNA-protein recognition. Nature Struct. Biol., 10, 834-837.
-
(2000)
Nature Struct. Biol.
, vol.10
, pp. 834-837
-
-
Williamson, J.R.1
-
25
-
-
0030338305
-
Theory and practice of nuclear spin relaxation in proteins
-
Dayie,K.T., Wagner,G. and Lefpvre,J.F. (1996) Theory and practice of nuclear spin relaxation in proteins. Annu. Rev. Phys. Chem., 47, 243-282.
-
(1996)
Annu. Rev. Phys. Chem.
, vol.47
, pp. 243-282
-
-
Dayie, K.T.1
Wagner, G.2
Lefpvre, J.F.3
-
26
-
-
0032573527
-
Order, dynamics and metal-binding in the lead-dependent ribozyme
-
Legault,P., Hoogstraten,C.G., Metlitzky,E. and Pardi,A. (1998) Order, dynamics and metal-binding in the lead-dependent ribozyme. J. Mol. Biol., 284, 325-335.
-
(1998)
J. Mol. Biol.
, vol.284
, pp. 325-335
-
-
Legault, P.1
Hoogstraten, C.G.2
Metlitzky, E.3
Pardi, A.4
-
27
-
-
0028228459
-
Sequence-specific binding of the influenza virus RNA polymerase to sequences located at the 5-end of the viral RNAs
-
Tiley,L.S., Hagen,M., Mathews,J.T. and Krystal,M. (1994) Sequence-specific binding of the influenza virus RNA polymerase to sequences located at the 5-end of the viral RNAs. J. Virol., 68, 5108-5116.
-
(1994)
J. Virol.
, vol.68
, pp. 5108-5116
-
-
Tiley, L.S.1
Hagen, M.2
Mathews, J.T.3
Krystal, M.4
-
28
-
-
0033169059
-
Distinct regions of influenza virus PB1 polymerase subunit recognize vRNA and cRNA templates
-
Gonzalez,S. and Ortin,J. (1999) Distinct regions of influenza virus PB1 polymerase subunit recognize vRNA and cRNA templates. EMBO J., 18, 3767-3775.
-
(1999)
EMBO J.
, vol.18
, pp. 3767-3775
-
-
Gonzalez, S.1
Ortin, J.2
-
29
-
-
0027240154
-
Photochemical cross-linking of influenza A polymerase to its virion RNA promoter defines a polymerase binding site at residue 9 to residue 12 of the promoter
-
Fodor,E., Seong,B.L. and Brownlee,G.G. (1993) Photochemical cross-linking of influenza A polymerase to its virion RNA promoter defines a polymerase binding site at residue 9 to residue 12 of the promoter. J. Gen. Virol., 74, 1327-1333.
-
(1993)
J. Gen. Virol.
, vol.74
, pp. 1327-1333
-
-
Fodor, E.1
Seong, B.L.2
Brownlee, G.G.3
-
30
-
-
0035151520
-
Peptide-triggered conformational switch in HIV-1 RRE RNA complexes
-
Gosser,Y., Hermann,T., Majumdar,A., Hu,W., Frederick,R., Jiang,F., Xu,W. and Patel,D.J. (2001) Peptide-triggered conformational switch in HIV-1 RRE RNA complexes. Nature Struct. Biol., 8, 146-150.
-
(2001)
Nature Struct. Biol.
, vol.8
, pp. 146-150
-
-
Gosser, Y.1
Hermann, T.2
Majumdar, A.3
Hu, W.4
Frederick, R.5
Jiang, F.6
Xu, W.7
Patel, D.J.8
-
31
-
-
0031847157
-
The position 4 nucleotide at the 3′ end of the influenza virus neuraminidase vRNA is involved in temporal regulation of transcription and replication of neuraminidase RNAs and affects the repertoire of influenza virus surface antigens
-
Lee,K.H. and Seong,B.L. (1998) The position 4 nucleotide at the 3′ end of the influenza virus neuraminidase vRNA is involved in temporal regulation of transcription and replication of neuraminidase RNAs and affects the repertoire of influenza virus surface antigens. J. Gen. Virol., 79, 1923-1934.
-
(1998)
J. Gen. Virol.
, vol.79
, pp. 1923-1934
-
-
Lee, K.H.1
Seong, B.L.2
-
32
-
-
0031003878
-
Roles of the influenza virus polymerase and nucleoprotein in forming a functional RNP structure
-
Klumpp,K. Ruigrok,R.W. and Baudin,F. (1997) Roles of the influenza virus polymerase and nucleoprotein in forming a functional RNP structure. EMBO J., 16, 1248-1257.
-
(1997)
EMBO J.
, vol.16
, pp. 1248-1257
-
-
Klumpp, K.1
Ruigrok, R.W.2
Baudin, F.3
-
33
-
-
0037079682
-
Definition of the minimal viral components required for the initiation of unprimed RNA synthesis by influenza virus RNA polymerase
-
Lee,M.T., Bishop,K., Medcalf,L., Elton,D., Digard,P. and Tiley,L. (2002) Definition of the minimal viral components required for the initiation of unprimed RNA synthesis by influenza virus RNA polymerase. Nucleic Acids Res., 30, 429-438.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 429-438
-
-
Lee, M.T.1
Bishop, K.2
Medcalf, L.3
Elton, D.4
Digard, P.5
Tiley, L.6
-
34
-
-
0035838382
-
Current topics in RNA-protein recognition: Control of specificity and biological function through induced fit and conformational capture
-
Leulliout,N. and Varani,G. (2001) Current topics in RNA-protein recognition: control of specificity and biological function through induced fit and conformational capture. Biochemistry, 40, 7947-7956.
-
(2001)
Biochemistry
, vol.40
, pp. 7947-7956
-
-
Leulliout, N.1
Varani, G.2
-
35
-
-
0028275669
-
Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent
-
Baudin,F., Bach,C., Cusack,S. and Ruigrok,R.W. (1994) Structure of influenza virus RNP. I. Influenza virus nucleoprotein melts secondary structure in panhandle RNA and exposes the bases to the solvent. EMBO J., 13, 3158-3165.
-
(1994)
EMBO J.
, vol.13
, pp. 3158-3165
-
-
Baudin, F.1
Bach, C.2
Cusack, S.3
Ruigrok, R.W.4
-
36
-
-
0029020773
-
Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus
-
Fodor,E., Pritlove,D.C. and Brownlee,G.G. (1995) Characterization of the RNA-fork model of virion RNA in the initiation of transcription in influenza A virus. J. Virol., 69, 4012-4019.
-
(1995)
J. Virol.
, vol.69
, pp. 4012-4019
-
-
Fodor, E.1
Pritlove, D.C.2
Brownlee, G.G.3
-
37
-
-
0031029225
-
Mutational analysis of the RNA-fork model of the influenza A virus vRNA promoter in vivo
-
Kim,H.J., Fodor,E., Brownlee,G.G. and Seong,B.L. (1997) Mutational analysis of the RNA-fork model of the influenza A virus vRNA promoter in vivo. J. Gen. Virol., 78, 353-357.
-
(1997)
J. Gen. Virol.
, vol.78
, pp. 353-357
-
-
Kim, H.J.1
Fodor, E.2
Brownlee, G.G.3
Seong, B.L.4
-
38
-
-
0032884864
-
Interaction of influenza virus polymerase with viral RNA in the 'corkscrew' conformation
-
Flick,R. and Hobom,G. (1999) Interaction of influenza virus polymerase with viral RNA in the 'corkscrew' conformation. J. Gen. Virol., 80, 2565-2572.
-
(1999)
J. Gen. Virol.
, vol.80
, pp. 2565-2572
-
-
Flick, R.1
Hobom, G.2
-
39
-
-
0028123774
-
Recombinant influenza virus polymerase: Requirement of both 5′ and 3′ viral ends for endonuclease activity
-
Hagen,M., Chung,T.D., Butcher,J.A. and Krystal,M. (1994) Recombinant influenza virus polymerase: requirement of both 5′ and 3′ viral ends for endonuclease activity. J. Virol., 68, 1509-1515.
-
(1994)
J. Virol.
, vol.68
, pp. 1509-1515
-
-
Hagen, M.1
Chung, T.D.2
Butcher, J.A.3
Krystal, M.4
-
40
-
-
0032695133
-
Functions of the 3′-untranslated regions of positive strand RNA viral genomes
-
Dreher,T.W. (1999) Functions of the 3′-untranslated regions of positive strand RNA viral genomes. Annu. Rev. Phytopathol., 37, 151-174.
-
(1999)
Annu. Rev. Phytopathol.
, vol.37
, pp. 151-174
-
-
Dreher, T.W.1
-
41
-
-
0031870250
-
Rotavirus RNA replication requires a single-stranded 3′ end for efficient minus-strand synthesis
-
Chen,D. and Patton,J.T. (1998) Rotavirus RNA replication requires a single-stranded 3′ end for efficient minus-strand synthesis. J. Virol., 72, 7387-7396.
-
(1998)
J. Virol.
, vol.72
, pp. 7387-7396
-
-
Chen, D.1
Patton, J.T.2
|