Facile preparation of DNA-tagged carbohydrates

Bioorganic and Medicinal Chemistry Letters

Volumn 13, Issue 16, 2003, Pages 2633-2636

  Sando, Shinsuke ^a   Matsui, Kazuki ^a   Niinomi, Yusuke ^a   Sato, Nobuhiko ^a   Aoyama, Yasuhiro ^a  

^a KYOTO UNIVERSITY   (Japan)

Author keywords

[No Author keywords available]

Indexed keywords

BORIC ACID; BUFFER; CARBOHYDRATE; CELLOBIOSE; DNA; LACTOSE; MALTOHEPTAOSE; MALTOSE; OLIGONUCLEOTIDE; POLYSACCHARIDE; UNCLASSIFIED DRUG;

ALKYLATION; AMINATION; ARTICLE; CONJUGATION; GENE CLUSTER; GLYCOSYLATION; PH; REDUCTION; TEMPERATURE;

EID: 0037811438     PISSN: 0960894X     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0960-894X(03)00559-6     Document Type: Article

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41. All reactions were executed in a total volume of 200 μL with final concentrations of each species as indicated in parentheses. Carbohydrate (20 mM) was incubated with 5′-aminohexyloligodeoxynucleotide (50 μM) in a borate buffer (100 mM. PH 8.0) containing sodium cyanoborohydride (250 mM) for 12 h at 60°C.
42. The stability of the linkage tethering carbohydrate to oligonucleotide was assessed by incubating the conjugate at 25°C. Almost no significant hydrolysis products were observed after 24-h incubation.
43. 2H, 90°C, 1 h, then sodium cyanoborohydride).
44. DNA-tagged products were not yielded in the case of N,N′-diacetyl chitobiose (GlcNAcβ1-4GlcNAc) under our experimental conditions.
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