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Volumn 1627, Issue 2-3, 2003, Pages 140-146

Gene structure and tissue expression of human selenoprotein W, SEPW1, and identification of a retroprocessed pseudogene, SEPW1P

Author keywords

Pseudogene; Selenoprotein W; Tissue expression

Indexed keywords

SELENOPROTEIN;

EID: 0037786553     PISSN: 01674781     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0167-4781(03)00078-2     Document Type: Article
Times cited : (19)

References (52)
  • 2
    • 0029894345 scopus 로고    scopus 로고
    • Knowing when not to stop: Selenocysteine incorporation in eukaryotes
    • Low S.C., Berry M.J. Knowing when not to stop: selenocysteine incorporation in eukaryotes. Trends Biochem. Sci. 21:1996;203-208.
    • (1996) Trends Biochem. Sci. , vol.21 , pp. 203-208
    • Low, S.C.1    Berry, M.J.2
  • 3
    • 0029939193 scopus 로고    scopus 로고
    • A protein binds the selenocysteine insertion element in the 3′-UTR of mammalian selenoprotein mRNAs
    • Hubert N., Walczak R., Carbon P., Krol A. A protein binds the selenocysteine insertion element in the 3′-UTR of mammalian selenoprotein mRNAs. Nucleic Acids Res. 24:1996;464-469.
    • (1996) Nucleic Acids Res. , vol.24 , pp. 464-469
    • Hubert, N.1    Walczak, R.2    Carbon, P.3    Krol, A.4
  • 4
    • 0030934409 scopus 로고    scopus 로고
    • An RNA-binding protein recognizes a mammalian selenocysteine insertion sequence element required for cotranslational incorporation of selenocysteine
    • Lesoon A., Mehta A., Singh R., Chisolm G.M., Driscoll D.M. An RNA-binding protein recognizes a mammalian selenocysteine insertion sequence element required for cotranslational incorporation of selenocysteine. Mol. Cell. Biol. 17:1997;1977-1985.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 1977-1985
    • Lesoon, A.1    Mehta, A.2    Singh, R.3    Chisolm, G.M.4    Driscoll, D.M.5
  • 5
    • 0036703297 scopus 로고    scopus 로고
    • Evolutionarily different RNA motifs and RNA-protein complexes to achieve selenoprotein synthesis
    • Krol A. Evolutionarily different RNA motifs and RNA-protein complexes to achieve selenoprotein synthesis. Biochimie. 84:2002;765-774.
    • (2002) Biochimie , vol.84 , pp. 765-774
    • Krol, A.1
  • 6
    • 1842859651 scopus 로고    scopus 로고
    • A survey of metazoan selenocysteine insertion sequences
    • Lambert A., Lescure A., Gautheret D. A survey of metazoan selenocysteine insertion sequences. Biochimie. 84:2002;953-959.
    • (2002) Biochimie , vol.84 , pp. 953-959
    • Lambert, A.1    Lescure, A.2    Gautheret, D.3
  • 7
    • 0037803960 scopus 로고    scopus 로고
    • Genetic and physical localisation of the gene causing cone-rod dystrophy (CORD2)
    • M.M. LaVail, J.G. Hollyfield, & R.E. Andersons. New York: Plenum
    • Bellingham J., Wijesuriya S.D., Evans K., Fryer A., Lennon G., Gregory C.Y. Genetic and physical localisation of the gene causing cone-rod dystrophy (CORD2). LaVail M.M., Hollyfield J.G., Andersons R.E. Degenerative Retinal Diseases. 1997;295-302 Plenum, New York.
    • (1997) Degenerative Retinal Diseases , pp. 295-302
    • Bellingham, J.1    Wijesuriya, S.D.2    Evans, K.3    Fryer, A.4    Lennon, G.5    Gregory, C.Y.6
  • 10
  • 11
    • 0037165648 scopus 로고    scopus 로고
    • Selenoprotein W is a glutathione-dependent antioxidant in vivo
    • Jeong D., Kim T.S., Chung Y.W., Lee B.J., Kim I.Y. Selenoprotein W is a glutathione-dependent antioxidant in vivo. FEBS Lett. 517:2002;225-228.
    • (2002) FEBS Lett. , vol.517 , pp. 225-228
    • Jeong, D.1    Kim, T.S.2    Chung, Y.W.3    Lee, B.J.4    Kim, I.Y.5
  • 12
    • 0034488368 scopus 로고    scopus 로고
    • Selenoprotein W: A review
    • Whanger P.D. Selenoprotein W: a review. Cell. Mol. Life Sci. 57:2000;1846-1852.
    • (2000) Cell. Mol. Life Sci. , vol.57 , pp. 1846-1852
    • Whanger, P.D.1
  • 15
    • 0030005755 scopus 로고    scopus 로고
    • The I.M.A.G.E. Consortium: An integrated molecular analysis of genomes and their expression
    • Lennon G., Auffray C., Polymeropoulos M., Soares M.B. The I.M.A.G.E. Consortium: an integrated molecular analysis of genomes and their expression. Genomics. 33:1996;151-152.
    • (1996) Genomics , vol.33 , pp. 151-152
    • Lennon, G.1    Auffray, C.2    Polymeropoulos, M.3    Soares, M.B.4
  • 16
    • 0032545225 scopus 로고    scopus 로고
    • Sequence and tissue expression of a novel human carbonic anhydrase-related protein, CARP-2, mapping to chromosome 19q13.3
    • Bellingham J., Gregory-Evans K., Gregory-Evans C.Y. Sequence and tissue expression of a novel human carbonic anhydrase-related protein, CARP-2, mapping to chromosome 19q13.3. Biochem. Biophys. Res. Commun. 253:1998;364-367.
    • (1998) Biochem. Biophys. Res. Commun. , vol.253 , pp. 364-367
    • Bellingham, J.1    Gregory-Evans, K.2    Gregory-Evans, C.Y.3
  • 17
    • 0030740168 scopus 로고    scopus 로고
    • Conserved features of selenocysteine insertion sequence (SECIS) elements in selenoprotein W cDNAs from five species
    • Gu Q.-P., Beilstein M.A., Vendeland S.C., Lugade A., Ream W., Whanger P.D. Conserved features of selenocysteine insertion sequence (SECIS) elements in selenoprotein W cDNAs from five species. Gene. 193:1997;187-196.
    • (1997) Gene , vol.193 , pp. 187-196
    • Gu, Q.-P.1    Beilstein, M.A.2    Vendeland, S.C.3    Lugade, A.4    Ream, W.5    Whanger, P.D.6
  • 19
    • 0002269844 scopus 로고    scopus 로고
    • Construction of bacterial artificial chromosome libraries using the modified P1 (PAC) system
    • N.C. Dracopoli, J.L. Haines, B.R. Korf, D.T. Moir, C.C. Morton, C.E. Seidman, J.G. Seidman, & D.R. Smiths. New York: Wiley
    • Ioannou P.A., de Jong P.J. Construction of bacterial artificial chromosome libraries using the modified P1 (PAC) system. Dracopoli N.C., Haines J.L., Korf B.R., Moir D.T., Morton C.C., Seidman C.E., Seidman J.G., Smiths D.R. Current Protocols in Human Genetics. 1996;5.15.1-5.15.24 Wiley, New York.
    • (1996) Current Protocols in Human Genetics , pp. 5151-51524
    • Ioannou, P.A.1    De Jong, P.J.2
  • 20
    • 18144433192 scopus 로고    scopus 로고
    • Microsatellite markers for the cone-rod retinal dystrophy gene, CRX, on 19q13.3
    • Bellingham J., Gregory-Evans C.Y., Gregory-Evans K. Microsatellite markers for the cone-rod retinal dystrophy gene, CRX, on 19q13.3. J. Med. Genet. 35:1998;527.
    • (1998) J. Med. Genet. , vol.35 , pp. 527
    • Bellingham, J.1    Gregory-Evans, C.Y.2    Gregory-Evans, K.3
  • 21
    • 0033804469 scopus 로고    scopus 로고
    • Genomic sequence, splicing, and gene annotation
    • Mount S.M. Genomic sequence, splicing, and gene annotation. Am. J. Hum. Genet. 67:2000;788-792.
    • (2000) Am. J. Hum. Genet. , vol.67 , pp. 788-792
    • Mount, S.M.1
  • 23
    • 0032964297 scopus 로고    scopus 로고
    • BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences
    • Tatusova T.A., Madden T.L. BLAST 2 Sequences, a new tool for comparing protein and nucleotide sequences. FEMS Microbiol. Lett. 174:1999;247-250.
    • (1999) FEMS Microbiol. Lett. , vol.174 , pp. 247-250
    • Tatusova, T.A.1    Madden, T.L.2
  • 24
    • 0036133044 scopus 로고    scopus 로고
    • AliBaba2: Context specific identification of transcription factor binding sites
    • Grabe N. AliBaba2: context specific identification of transcription factor binding sites. In Silico Biol. 2:2002;S1-S15.
    • (2002) In Silico Biol. , vol.2
    • Grabe, N.1
  • 25
    • 0026447291 scopus 로고
    • Transcription by RNA polymerase II: Initiator-directed formation of transcription-competent complexes
    • Weis L., Reinberg D. Transcription by RNA polymerase II: initiator-directed formation of transcription-competent complexes. FASEB J. 6:1992;3300-3309.
    • (1992) FASEB J. , vol.6 , pp. 3300-3309
    • Weis, L.1    Reinberg, D.2
  • 26
    • 0024557039 scopus 로고
    • The "initiator" as a transcription control element
    • Smale S.T., Baltimore D. The "initiator" as a transcription control element. Cell. 57:1989;103-113.
    • (1989) Cell , vol.57 , pp. 103-113
    • Smale, S.T.1    Baltimore, D.2
  • 27
    • 0028111945 scopus 로고
    • Start site selection by Sp1 in the TATA-less human Ha-ras promoter
    • Lu J., Lee W., Jiang C., Keller E.B. Start site selection by Sp1 in the TATA-less human Ha-ras promoter. J. Biol. Chem. 269:1994;5391-5402.
    • (1994) J. Biol. Chem. , vol.269 , pp. 5391-5402
    • Lu, J.1    Lee, W.2    Jiang, C.3    Keller, E.B.4
  • 28
    • 0033994061 scopus 로고    scopus 로고
    • Selenoprotein W accumulates primarily in primate skeletal muscle, heart, brain and tongue
    • Gu Q.-P., Sun Y., Ream L.W., Whanger P.D. Selenoprotein W accumulates primarily in primate skeletal muscle, heart, brain and tongue. Mol. Cell. Biochem. 204:2000;49-56.
    • (2000) Mol. Cell. Biochem. , vol.204 , pp. 49-56
    • Gu, Q.-P.1    Sun, Y.2    Ream, L.W.3    Whanger, P.D.4
  • 29
    • 0028929113 scopus 로고
    • Tissue distribution and influence of selenium status on levels of selenoprotein W
    • Yeh J.-Y., Beilstein M.A., Andrews J.S., Whanger P.D. Tissue distribution and influence of selenium status on levels of selenoprotein W. FASEB J. 9:1995;392-396.
    • (1995) FASEB J. , vol.9 , pp. 392-396
    • Yeh, J.-Y.1    Beilstein, M.A.2    Andrews, J.S.3    Whanger, P.D.4
  • 30
    • 0031973246 scopus 로고    scopus 로고
    • Effect of dietary selenium on Selenoprotein W and glutathione peroxidase in 28 tissues of the rat
    • Sun Y., Ha P.-C., Butler J.A., Ou B.-R., Yeh J.-Y., Whanger P. Effect of dietary selenium on Selenoprotein W and glutathione peroxidase in 28 tissues of the rat. J. Nutr. Biochem. 9:1998;23-27.
    • (1998) J. Nutr. Biochem. , vol.9 , pp. 23-27
    • Sun, Y.1    Ha, P.-C.2    Butler, J.A.3    Ou, B.-R.4    Yeh, J.-Y.5    Whanger, P.6
  • 32
    • 0027207975 scopus 로고
    • Localization of the human bona fide calmodulin genes CALM1, CALM2, and CALM3 to chromosomes 14q24-q31, 2p21.1-p21.3, and 19q13.2-q13.3
    • Berchtold M.W., Egli R., Rhyner J.A., Hameister H., Strehler E.E. Localization of the human bona fide calmodulin genes CALM1, CALM2, and CALM3 to chromosomes 14q24-q31, 2p21.1-p21.3, and 19q13.2-q13.3. Genomics. 16:1993;461-465.
    • (1993) Genomics , vol.16 , pp. 461-465
    • Berchtold, M.W.1    Egli, R.2    Rhyner, J.A.3    Hameister, H.4    Strehler, E.E.5
  • 33
    • 0022555861 scopus 로고
    • Nonviral retroposons: Genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information
    • Weiner A.M., Deininger P.L., Efstratiadis A. Nonviral retroposons: genes, pseudogenes, and transposable elements generated by the reverse flow of genetic information. Annu. Rev. Biochem. 55:1986;631-661.
    • (1986) Annu. Rev. Biochem. , vol.55 , pp. 631-661
    • Weiner, A.M.1    Deininger, P.L.2    Efstratiadis, A.3
  • 34
    • 0022293979 scopus 로고
    • Processed pseudogenes: Characteristics and evolution
    • Vanin E.F. Processed pseudogenes: characteristics and evolution. Annu. Rev. Genet. 19:1985;253-272.
    • (1985) Annu. Rev. Genet. , vol.19 , pp. 253-272
    • Vanin, E.F.1
  • 35
    • 0034079713 scopus 로고    scopus 로고
    • Human LINE retrotransposons generate processed pseudogenes
    • Esnault C., Maestre J., Heidmann T. Human LINE retrotransposons generate processed pseudogenes. Nat. Genet. 24:2000;363-367.
    • (2000) Nat. Genet. , vol.24 , pp. 363-367
    • Esnault, C.1    Maestre, J.2    Heidmann, T.3
  • 36
    • 0030813818 scopus 로고    scopus 로고
    • Functional differences between the human LINE retrotransposon and retroviral reverse transcriptases for in vivo mRNA reverse transcription
    • Dhellin O., Maestre J., Heidmann T. Functional differences between the human LINE retrotransposon and retroviral reverse transcriptases for in vivo mRNA reverse transcription. EMBO J. 16:1997;6590-6602.
    • (1997) EMBO J. , vol.16 , pp. 6590-6602
    • Dhellin, O.1    Maestre, J.2    Heidmann, T.3
  • 38
    • 17344370076 scopus 로고    scopus 로고
    • The impact of L1 retrotransposons on the human genome
    • Kazazian H.H. Jr., Moran J.V. The impact of L1 retrotransposons on the human genome. Nat. Genet. 19:1998;19-24.
    • (1998) Nat. Genet. , vol.19 , pp. 19-24
    • Kazazian H.H., Jr.1    Moran, J.V.2
  • 40
    • 0019976445 scopus 로고
    • The Alu family of dispersed repetitive sequences
    • Schmid C.W., Jelinek W.R. The Alu family of dispersed repetitive sequences. Science. 216:1982;1065-1070.
    • (1982) Science , vol.216 , pp. 1065-1070
    • Schmid, C.W.1    Jelinek, W.R.2
  • 41
    • 0020024303 scopus 로고
    • Repetitive sequences in eukaryotic DNA and their expression
    • Jelinek W.R., Schmid C.W. Repetitive sequences in eukaryotic DNA and their expression. Annu. Rev. Biochem. 51:1982;813-844.
    • (1982) Annu. Rev. Biochem. , vol.51 , pp. 813-844
    • Jelinek, W.R.1    Schmid, C.W.2
  • 42
    • 0342858851 scopus 로고    scopus 로고
    • Nature and structure of human genes that generate retropseudogenes
    • Gonçalves I., Duret L., Mouchiroud D. Nature and structure of human genes that generate retropseudogenes. Genome Res. 10:2000;672-678.
    • (2000) Genome Res. , vol.10 , pp. 672-678
    • Gonçalves, I.1    Duret, L.2    Mouchiroud, D.3
  • 43
    • 0032865868 scopus 로고    scopus 로고
    • RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements
    • Brosius J. RNAs from all categories generate retrosequences that may be exapted as novel genes or regulatory elements. Gene. 238:1999;115-134.
    • (1999) Gene , vol.238 , pp. 115-134
    • Brosius, J.1
  • 44
    • 0029805895 scopus 로고    scopus 로고
    • A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs
    • Walczak R., Westhof E., Carbon P., Krol A. A novel RNA structural motif in the selenocysteine insertion element of eukaryotic selenoprotein mRNAs. RNA. 2:1996;367-379.
    • (1996) RNA , vol.2 , pp. 367-379
    • Walczak, R.1    Westhof, E.2    Carbon, P.3    Krol, A.4
  • 45
    • 0032502777 scopus 로고    scopus 로고
    • A new human selenium-containing protein. Purification, characterization, and cDNA sequence
    • Gladyshev V.N., Jeang K.-T., Wootton J.C., Hatfield D.L. A new human selenium-containing protein. Purification, characterization, and cDNA sequence. J. Biol. Chem. 273:1998;8910-8915.
    • (1998) J. Biol. Chem. , vol.273 , pp. 8910-8915
    • Gladyshev, V.N.1    Jeang, K.-T.2    Wootton, J.C.3    Hatfield, D.L.4
  • 46
    • 0033621335 scopus 로고    scopus 로고
    • Novel selenoproteins identified in silico and in vivo by using a conserved RNA structural motif
    • Lescure A., Gautheret D., Carbon P., Krol A. Novel selenoproteins identified in silico and in vivo by using a conserved RNA structural motif. J. Biol. Chem. 274:1999;38147-38154.
    • (1999) J. Biol. Chem. , vol.274 , pp. 38147-38154
    • Lescure, A.1    Gautheret, D.2    Carbon, P.3    Krol, A.4
  • 47
    • 0027282772 scopus 로고
    • Functional characterization of the eukaryotic SECIS elements which direct selenocysteine insertion at UGA codons
    • Berry M.J., Banu L., Harney J.W., Larsen P.R. Functional characterization of the eukaryotic SECIS elements which direct selenocysteine insertion at UGA codons. EMBO J. 12:1993;3315-3322.
    • (1993) EMBO J. , vol.12 , pp. 3315-3322
    • Berry, M.J.1    Banu, L.2    Harney, J.W.3    Larsen, P.R.4
  • 48
    • 0029331645 scopus 로고
    • Structure and function of the selenium translation element in the 3′-untranslated region of human cellular glutathione peroxidase mRNA
    • Shen Q., Leonard J.L., Newburger P.E. Structure and function of the selenium translation element in the 3′-untranslated region of human cellular glutathione peroxidase mRNA. RNA. 1:1995;519-525.
    • (1995) RNA , vol.1 , pp. 519-525
    • Shen, Q.1    Leonard, J.L.2    Newburger, P.E.3
  • 49
    • 0036198598 scopus 로고    scopus 로고
    • Discovery of a functional retrotransposon of the murine phospholipid hydroperoxide glutathione peroxidase: Chromosomal localization and tissue-specific expression pattern
    • Boschan C., Borchert A., Ufer C., Thiele B.-J., Kuhn H. Discovery of a functional retrotransposon of the murine phospholipid hydroperoxide glutathione peroxidase: chromosomal localization and tissue-specific expression pattern. Genomics. 79:2002;387-394.
    • (2002) Genomics , vol.79 , pp. 387-394
    • Boschan, C.1    Borchert, A.2    Ufer, C.3    Thiele, B.-J.4    Kuhn, H.5
  • 51
    • 0028786666 scopus 로고
    • Gene conversions and unequal crossovers between CYP21 (steroid 21-hydroxylase gene) and CYP21P involve different mechanisms
    • Tusie-Luna M.T., White P.C. Gene conversions and unequal crossovers between CYP21 (steroid 21-hydroxylase gene) and CYP21P involve different mechanisms. Proc. Natl. Acad. Sci. U. S. A. 92:1995;10796-10800.
    • (1995) Proc. Natl. Acad. Sci. U. S. A. , vol.92 , pp. 10796-10800
    • Tusie-Luna, M.T.1    White, P.C.2


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