-
1
-
-
0040241960
-
Protein complexes in nucleotide excision repair
-
Araujo, S.J., and Wood, R.D. (1999) Protein complexes in nucleotide excision repair. Mutat Res 435: 23-33.
-
(1999)
Mutat Res
, vol.435
, pp. 23-33
-
-
Araujo, S.J.1
Wood, R.D.2
-
2
-
-
0033105094
-
Conserved domains in DNA repair proteins and evolution of repair systems
-
Aravind, L., Walker, D.R., and Koonin, E.V. (1999) Conserved domains in DNA repair proteins and evolution of repair systems. Nucleic Acids Res 27: 1223-1242.
-
(1999)
Nucleic Acids Res
, vol.27
, pp. 1223-1242
-
-
Aravind, L.1
Walker, D.R.2
Koonin, E.V.3
-
3
-
-
0034462093
-
Damage tolerance protein Mus81 associates with the FHA1 domain of checkpoint kinase Cds1
-
Boddy, M.N., Lopez-Girona, A., Shanahan, P., Interthal, H., Heyer, W.D., and Russell, P. (2000) Damage tolerance protein Mus81 associates with the FHA1 domain of checkpoint kinase Cds1. Mol Cell Biol 20: 8758-8766.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 8758-8766
-
-
Boddy, M.N.1
Lopez-Girona, A.2
Shanahan, P.3
Interthal, H.4
Heyer, W.D.5
Russell, P.6
-
4
-
-
0035900652
-
Mus81-Eme1 are essential components of a Holliday junction resolvase
-
Boddy, M.N., Gaillard, P.H., McDonald, W.H., Shanahan, P., Yates, J.R., III, and Russell, P. (2001) Mus81-Eme1 are essential components of a Holliday junction resolvase. Cell 107: 537-548.
-
(2001)
Cell
, vol.107
, pp. 537-548
-
-
Boddy, M.N.1
Gaillard, P.H.2
McDonald, W.H.3
Shanahan, P.4
Yates J.R. III5
Russell, P.6
-
5
-
-
18244405819
-
Human Mus81-associated endonuclease cleaves Holliday junctions in vitro
-
Chen, X.B., Melchionna, R., Denis, C.M., Gaillard, P.H., Blasina, A., Van de Weyer, I., et al. (2001) Human Mus81-associated endonuclease cleaves Holliday junctions in vitro. Mol Cell 8: 1117-1127.
-
(2001)
Mol Cell
, vol.8
, pp. 1117-1127
-
-
Chen, X.B.1
Melchionna, R.2
Denis, C.M.3
Gaillard, P.H.4
Blasina, A.5
Van De Weyer, I.6
-
6
-
-
0036305477
-
NurA, a novel 5′-3′ nuclease gene linked to rad50, and mre11 homologs of thermophilic Archaea
-
Constantinesco, F., Forterre, P., and Elie, C. (2002) NurA, a novel 5′-3′ nuclease gene linked to rad50, and mre11 homologs of thermophilic Archaea. EMBO Rep 3: 537-542.
-
(2002)
EMBO Rep
, vol.3
, pp. 537-542
-
-
Constantinesco, F.1
Forterre, P.2
Elie, C.3
-
7
-
-
0028808098
-
Role of the rad1 and rad10 proteins in nucleotide excision-repair and recombination
-
Davies, A.A., Friedberg, E.C., Tomkinson, A.E., Wood, R.D., and West, S.C. (1995) Role of the rad1 and rad10 proteins in nucleotide excision-repair and recombination. J Biol Chem 270: 24638-24641.
-
(1995)
J Biol Chem
, vol.270
, pp. 24638-24641
-
-
Davies, A.A.1
Friedberg, E.C.2
Tomkinson, A.E.3
Wood, R.D.4
West, S.C.5
-
8
-
-
0037251411
-
A heterotrimeric PCNA in the hyperthermophilic archaeon Sulfolobus solfataricus
-
Dionne, I., Nookala, R.K., Jackson, S.P., Doherty, A.J., and Bell, S.D. (2003) A heterotrimeric PCNA in the hyperthermophilic archaeon Sulfolobus solfataricus. Mol Cell 11: 275-282.
-
(2003)
Mol Cell
, vol.11
, pp. 275-282
-
-
Dionne, I.1
Nookala, R.K.2
Jackson, S.P.3
Doherty, A.J.4
Bell, S.D.5
-
9
-
-
0029929070
-
The helix-hairpin-helix DNA-binding motif: A structural basis for non-sequence-specific recognition of DNA
-
Doherty, A.J., Serpell, L.C., and Ponting, C.P. (1996) The helix-hairpin-helix DNA-binding motif: a structural basis for non-sequence-specific recognition of DNA. Nucleic Acids Res 24: 2488-2497.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 2488-2497
-
-
Doherty, A.J.1
Serpell, L.C.2
Ponting, C.P.3
-
10
-
-
0037090816
-
The active site of the DNA repair endonuclease XPF-ERCC1 forms a highly conserved nuclease motif
-
Enzlin, J.H., and Scharer, O.D. (2002) The active site of the DNA repair endonuclease XPF-ERCC1 forms a highly conserved nuclease motif. EMBO J 21: 2045-2053.
-
(2002)
EMBO J
, vol.21
, pp. 2045-2053
-
-
Enzlin, J.H.1
Scharer, O.D.2
-
11
-
-
0030732132
-
Mechanism of open complex and dual incision formation by human nucleotide excision repair factors
-
Evans, E., Moggs, J.G., Hwang, J.R., Egly, J.M., and Wood, R.D. (1997) Mechanism of open complex and dual incision formation by human nucleotide excision repair factors. EMBO J 16: 6559-6573.
-
(1997)
EMBO J
, vol.16
, pp. 6559-6573
-
-
Evans, E.1
Moggs, J.G.2
Hwang, J.R.3
Egly, J.M.4
Wood, R.D.5
-
12
-
-
0035865927
-
Activity of individual ERCC1 and XPF subunits in DNA nucleotide excision repair
-
Gaillard, P.H., and Wood, R.D. (2001) Activity of individual ERCC1 and XPF subunits in DNA nucleotide excision repair. Nucleic Acids Res 29: 872-879.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 872-879
-
-
Gaillard, P.H.1
Wood, R.D.2
-
13
-
-
0037015614
-
Genome sequence of the human malaria parasite Plasmodium falciparum
-
Gardner, M.J., Hall, N., Fung, E., White, O., Berriman, M., Hyman, R.W., et al. (2002) Genome sequence of the human malaria parasite Plasmodium falciparum. Nature 419, 498-511.
-
(2002)
Nature
, vol.419
, pp. 498-511
-
-
Gardner, M.J.1
Hall, N.2
Fung, E.3
White, O.4
Berriman, M.5
Hyman, R.W.6
-
14
-
-
0030767281
-
The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21
-
Gary, R., Ludwig, D.L., Cornelius, H.L., MacInnes, M.A., and Park, M.S. (1997) The DNA repair endonuclease XPG binds to proliferating cell nuclear antigen (PCNA) and shares sequence elements with the PCNA-binding regions of FEN-1 and cyclin-dependent kinase inhibitor p21. J Biol Chem 272: 24522-24529.
-
(1997)
J Biol Chem
, vol.272
, pp. 24522-24529
-
-
Gary, R.1
Ludwig, D.L.2
Cornelius, H.L.3
MacInnes, M.A.4
Park, M.S.5
-
15
-
-
0034175750
-
The question of DNA repair in hyperthermophilic archaea
-
Grogan, D.W. (2000) The question of DNA repair in hyperthermophilic archaea. Trends Microbiol 8: 180-185.
-
(2000)
Trends Microbiol
, vol.8
, pp. 180-185
-
-
Grogan, D.W.1
-
16
-
-
0028122990
-
Holliday junction cleavage by yeast Rad1 protein
-
Habraken, Y., Sung, P., Prakash, L., and Prakash, S. (1994) Holliday junction cleavage by yeast Rad1 protein. Nature 371: 531-534.
-
(1994)
Nature
, vol.371
, pp. 531-534
-
-
Habraken, Y.1
Sung, P.2
Prakash, L.3
Prakash, S.4
-
17
-
-
0033830809
-
MUS81 encodes a novel helix-hairpin-helix protein involved in the response to UV- and methylation-induced DNA damage in Saccharomyces cerevisiae
-
Interthal, H., and Heyer, W.D. (2000) MUS81 encodes a novel helix-hairpin-helix protein involved in the response to UV- and methylation-induced DNA damage in Saccharomyces cerevisiae. Mol Gen Genet 263: 812-827.
-
(2000)
Mol Gen Genet
, vol.263
, pp. 812-827
-
-
Interthal, H.1
Heyer, W.D.2
-
18
-
-
0035886690
-
Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease
-
Kaliraman, V., Mullen, J.R., Fricke, W.M., Bastin-Shanower, S.A., and Brill, S.J. (2001) Functional overlap between Sgs1-Top3 and the Mms4-Mus81 endonuclease. Genes Dev 15: 2730-2740.
-
(2001)
Genes Dev
, vol.15
, pp. 2730-2740
-
-
Kaliraman, V.1
Mullen, J.R.2
Fricke, W.M.3
Bastin-Shanower, S.A.4
Brill, S.J.5
-
19
-
-
0036698611
-
Novel endonuclease in Archaea cleaving DNA with various branched structure
-
Komori, K., Fujikane, R., Shinagawa, H., and Ishino, Y. (2002) Novel endonuclease in Archaea cleaving DNA with various branched structure. Genes Genet Syst 77: 227-241.
-
(2002)
Genes Genet Syst
, vol.77
, pp. 227-241
-
-
Komori, K.1
Fujikane, R.2
Shinagawa, H.3
Ishino, Y.4
-
20
-
-
0033529916
-
A Holliday junction resolvase from Pyrococcus furiosus: Functional similarity to Escherichia coli RuvC provides evidence for conserved mechanism of homologous recombination in bacteria, eukarya, and archaea
-
Komori, K., Sakae, S., Shinagawa, H., Morikawa, K., and Ishino, Y. (1999) A Holliday junction resolvase from Pyrococcus furiosus: functional similarity to Escherichia coli RuvC provides evidence for conserved mechanism of homologous recombination in bacteria, eukarya, and archaea. Proc Natl Acad Sci USA 96: 8873-8878.
-
(1999)
Proc Natl Acad Sci USA
, vol.96
, pp. 8873-8878
-
-
Komori, K.1
Sakae, S.2
Shinagawa, H.3
Morikawa, K.4
Ishino, Y.5
-
21
-
-
0034714401
-
Repair of an interstrand DNA cross-link initiated by ERCC1-XPF repair/recombination nuclease
-
Kuraoka, I., Kobertz, W.R., Ariza, R.R., Biggerstaff, M., Essigmann, J.M., and Wood, R.D. (2000) Repair of an interstrand DNA cross-link initiated by ERCC1-XPF repair/recombination nuclease. J Biol Chem 275: 26632-26636.
-
(2000)
J Biol Chem
, vol.275
, pp. 26632-26636
-
-
Kuraoka, I.1
Kobertz, W.R.2
Ariza, R.R.3
Biggerstaff, M.4
Essigmann, J.M.5
Wood, R.D.6
-
22
-
-
0034682793
-
A conserved nuclease domain in the archaeal holliday junction resolving enzyme Hjc
-
Kvaratskhelia, M., Wardleworth, B.N., Norman, D.G., and White, M.F. (2000) A conserved nuclease domain in the archaeal holliday junction resolving enzyme Hjc. J Biol Chem 275: 25540-25546.
-
(2000)
J Biol Chem
, vol.275
, pp. 25540-25546
-
-
Kvaratskhelia, M.1
Wardleworth, B.N.2
Norman, D.G.3
White, M.F.4
-
23
-
-
0032478718
-
DNA structural elements required for ERCC1-XPF endonuclease activity
-
de Laat, W.L., Appeldoorn, E., Jaspers, N.G., and Hoeijmakers, J.H. (1998a) DNA structural elements required for ERCC1-XPF endonuclease activity. J Biol Chem 273: 7835-7842.
-
(1998)
J Biol Chem
, vol.273
, pp. 7835-7842
-
-
De Laat, W.L.1
Appeldoorn, E.2
Jaspers, N.G.3
Hoeijmakers, J.H.4
-
24
-
-
0032529167
-
DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair
-
de Laat, W.L., Appeldoorn, E., Sugasawa, K., Weterings, E., Jaspers, N.G., and Hoeijmakers, J.H. (1998b) DNA-binding polarity of human replication protein A positions nucleases in nucleotide excision repair. Genes Dev 12: 2598-2609.
-
(1998)
Genes Dev
, vol.12
, pp. 2598-2609
-
-
De Laat, W.L.1
Appeldoorn, E.2
Sugasawa, K.3
Weterings, E.4
Jaspers, N.G.5
Hoeijmakers, J.H.6
-
25
-
-
0033118354
-
Molecular mechanism of nucleotide excision repair
-
de Laat, W.L., Jaspers, N.G., and Hoeijmakers, J.H. (1999) Molecular mechanism of nucleotide excision repair. Genes Dev 13: 768-785.
-
(1999)
Genes Dev
, vol.13
, pp. 768-785
-
-
De Laat, W.L.1
Jaspers, N.G.2
Hoeijmakers, J.H.3
-
26
-
-
0035107856
-
Crystal structure of an archaeal DNA sliding clamp: Proliferating cell nuclear antigen from Pyrococcus furiosus
-
Matsumiya, S., Ishino, Y., and Morikawa, K. (2001) Crystal structure of an archaeal DNA sliding clamp: proliferating cell nuclear antigen from Pyrococcus furiosus. Protein Sci 10: 17-23.
-
(2001)
Protein Sci
, vol.10
, pp. 17-23
-
-
Matsumiya, S.1
Ishino, Y.2
Morikawa, K.3
-
27
-
-
0031795759
-
Nucleotide excision repair in the third kingdom
-
Ogrunc, M., Becker, D.F., Ragsdale, S.W., and Sancar, A. (1998) Nucleotide excision repair in the third kingdom. J Bacteriol 180: 5796-5798.
-
(1998)
J Bacteriol
, vol.180
, pp. 5796-5798
-
-
Ogrunc, M.1
Becker, D.F.2
Ragsdale, S.W.3
Sancar, A.4
-
28
-
-
0029828941
-
Sequential binding of DNA repair proteins RPA and ERCC1 to XPA in vitro
-
Saijo, M., Kuraoka, I., Masutani, C., Hanaoka, F., and Tanaka, K. (1996) Sequential binding of DNA repair proteins RPA and ERCC1 to XPA in vitro. Nucleic Acids Res 24: 4719-4724.
-
(1996)
Nucleic Acids Res
, vol.24
, pp. 4719-4724
-
-
Saijo, M.1
Kuraoka, I.2
Masutani, C.3
Hanaoka, F.4
Tanaka, K.5
-
29
-
-
0033867763
-
The DNA binding and pairing preferences of the archaeal RadA protein demonstrate a universal characteristic of DNA strand exchange proteins
-
Seitz, E.M., and Kowalczykowski, S.C. (2000) The DNA binding and pairing preferences of the archaeal RadA protein demonstrate a universal characteristic of DNA strand exchange proteins. Mol Microbiol 37: 555-560.
-
(2000)
Mol Microbiol
, vol.37
, pp. 555-560
-
-
Seitz, E.M.1
Kowalczykowski, S.C.2
-
30
-
-
0032588241
-
A relationship betweena DNA-repair/recombination nuclease family and archaeal helicases
-
Sgouros, J., Galliard, P.H., and Wood, R.D. (1999) A relationship betweena DNA-repair/recombination nuclease family and archaeal helicases. Trends Biochem Sci 24: 95-97.
-
(1999)
Trends Biochem Sci
, vol.24
, pp. 95-97
-
-
Sgouros, J.1
Galliard, P.H.2
Wood, R.D.3
-
31
-
-
0035865799
-
Identification and properties of the crenarchaeal single-stranded DNA binding protein from Sulfolobus solfataricus
-
Wadsworth, R.I., and White, M.F. (2001) Identification and properties of the crenarchaeal single-stranded DNA binding protein from Sulfolobus solfataricus. Nucleic Acids Res 29: 914-920.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 914-920
-
-
Wadsworth, R.I.1
White, M.F.2
-
32
-
-
0033777562
-
The puzzle of PCNA's many partners
-
Warbrick, E. (2000) The puzzle of PCNA's many partners. Bioessays 22: 997-1006.
-
(2000)
Bioessays
, vol.22
, pp. 997-1006
-
-
Warbrick, E.1
-
33
-
-
0029880444
-
The structure-selectivity and sequence-preference of the junction-resolving enzyme CCE1 of Saccharomyces cerevisiae
-
White, M.F., and Lilley, D.M.J. (1996) The structure-selectivity and sequence-preference of the junction-resolving enzyme CCE1 of Saccharomyces cerevisiae. J Mol Biol 257: 330-341.
-
(1996)
J Mol Biol
, vol.257
, pp. 330-341
-
-
White, M.F.1
Lilley, D.M.J.2
-
34
-
-
0037151021
-
Direct interaction between uracil-DNA glycosylase and a proliferating cell nuclear antigen homolog in the crenarchaeon Pyrobaculum aerophilum
-
Yang, H., Chiang, J.H., Fitz-Gibbon, S., Lebel, M., Sartori, A.A., Jiricny, J., Slupska, M.M., and Miller, J.H. (2002) Direct interaction between uracil-DNA glycosylase and a proliferating cell nuclear antigen homolog in the crenarchaeon Pyrobaculum aerophilum. J Biol Chem 277: 22271-22278.
-
(2002)
J Biol Chem
, vol.277
, pp. 22271-22278
-
-
Yang, H.1
Chiang, J.H.2
Fitz-Gibbon, S.3
Lebel, M.4
Sartori, A.A.5
Jiricny, J.6
Slupska, M.M.7
Miller, J.H.8
|