Developments in microarray technologies

Drug Discovery Today

Volumn 8, Issue 14, 2003, Pages 642-651

  Howbrook, David N ^a,c   Van Der Valk, Anne M ^a,c   O'Shaughnessy, Meg C ^c   Sarker, Dipak K ^a   Baker, Simon C ^b   Lloyd, Andrew W ^a  

^a UNIVERSITY OF BRIGHTON   (United Kingdom)

^b QUEEN MARY UNIVERSITY OF LONDON   (United Kingdom)

^c ABgene   (United Kingdom)

Author keywords

Biotechnology; Drug Discovery; Glycome; Metabolome; Microarray; Microfluidics; Nanotechnology; Pharmaceutical Science; Proteome; Techniques Methods

Indexed keywords

ANTIBODY SCREENING; DNA DETERMINATION; DNA MICROARRAY; GENE EXPRESSION; GENOMICS; NANOTECHNOLOGY; PROTEIN ANALYSIS; PROTEIN INTERACTION; PROTEIN PROCESSING; PROTEOMICS; REVIEW; RNA ANALYSIS;

GENE EXPRESSION PROFILING; NANOTECHNOLOGY; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; RESEARCH; TECHNOLOGY, PHARMACEUTICAL;

EID: 0037674681     PISSN: 13596446     EISSN: None     Source Type: Journal    
DOI: 10.1016/S1359-6446(03)02773-9     Document Type: Review

References (62)

1. Ekins R.P. Multi-analyte immunoassay. J. Pharm. Biomed. Anal. 7:1989;155-168.
2. Ekins R.P., Chu F. Multispot, multianalyte immunoassay. The microanalytical 'compact disk' of the future. Ann. Biol. Clin. (Paris). 50:1992;337-353.
3. Templin M.F., et al. Protein microarray technology. Drug Discov. Today. 7:2002;815-822.
4. Gerhold D.L., et al. Better therapeutics through microarrays. Nat. Genet. 32:2002;S547-S551.
5. Cronin M.T., et al. Cystic fibrosis mutation detection by hybridisation to light generated DNA probe arrays. Hum. Mutat. 7:1996;244-255.
6. Hacia J.G., et al. Detection of heterozygous mutations in BRCA1 using high density oligonucleotide arrays and two-colour fluorescence analysis. Nat. Genet. 14:1996;441-447.
7. Raitio M., et al. Y-chromosomal SNPs in Finn-Ugric-speaking populations analysed by minisequencing on microarrays. Genome Res. 11:2001;471-482.
8. Schena M., et al. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science. 270:1995;467-470.
9. Khan J., et al. Classification and diagnostic prediction of cancers using gene expression profiling and artificial neural networks. Nat. Med. 7:2001;673-679.
10. Fodor, S.P.A. et al. (1995) Array of oligonucleotides on a solid substrate. USP5445934.
11. Lipshutz R.J., et al. High density synthetic oligonucleotide arrays. Nat. Genet. 21:1999;S20-S24.
12. Straub T.M., Chandler D.P. Towards a unified system for detecting waterborne pathogens. J. Microbiol. Methods. 53:2003;185-197.
13. Polz M.F., et al. A(r)Ray of Hope in Analysis of the Function and Diversity of Microbial Communities. Biol. Bull. 204:2003;196-199.
14. Peizhong L., et al. Does the bacterial DNA found in middle ear effusions come from viable bacteria? Clin. Otolaryngol. 25:2000;570-576.
15. Dalton R., Abbott A. Can researchers find recipe for proteins and chips? Nature. 402:1999;718-719.
16. MacBeath G., Schreiber S.L. Printing proteins as microarrays for high-throughput function determination. Science. 289:2000;1760-1763.
17. Arenkov P., et al. Protein microchips: Use for immunoassay and enzymatic reactions. Anal. Biochem. 278:2000;123-131.
18. Mooney J.F., et al. Patterning of functional antibodies and other proteins by photolithography of siliane monolayers. Proc. Natl. Acad. Sci. U. S. A. 93:1996;12287-12291.
19. He M., Taussig M. Single step generation of protein arrays from DNA by cell-free expression and in situ immobilisation (PISA method). Nucleic Acids Res. 29:2001;e73.
20. Lee M., Walt D.R. A fiber-optic microarray biosensor using aptamers as receptors. Anal. Biochem. 282:2000;142-146.
21. Nedelkov D., et al. Design of buffer exchange surfaces and sensor chips for biosensor chip mass spectrometry. Proteomics. 2:2002;441-446.
22. Houseman B.T., et al. Peptide chips for the quantitative evaluation of protein kinase activity. Nat. Biotechnol. 20:2002;270-274.
23. Schlessinger J. A solid base for assaying protein kinase activity. Nat. Biotechnol. 20:2002;232-233.
24. Zhu H., et al. Analysis of yeast protein kinases using protein chips. Nat. Genet. 26:2000;283-289.
25. Mitchell P. A perspective on protein microarrays. Nat. Biotechnol. 20:2002;225-229.
26. Fodor S.P., et al. Light-directed, spatially addressable parallel chemical synthesis. Science. 251:1991;767-773.
27. Fukui S., et al. Oligosaccharide microarrays for high-throughput detection and specificity assignments of carbohydrate-protein interactions. Nat. Biotechnol. 20:2002;1011-1017.
28. Wang D., et al. Carbohydrate microarrays for the recognition of cross-reactive molecular markers of microbes and host cells. Nat. Biotechnol. 20:2002;275-281.
29. Kononen J., et al. Tissue microarrays for high-throughput molecular profiling of tumour specimens. Nat. Med. 4:1998;844-847.
30. Kallioniemi O.P., et al. Tissue microarray technology for high-throughput molecular profiling of cancer. Hum. Mol. Genet. 10:2001;657-662.
31. Rimm D.L., et al. Amplification of tissue by construction of tissue microarrays. Exp. Mol. Pathol. 70:2001;255-264.
32. Perkel J.M. Tissue microarrays: advancing clinical genomics. The Scientist. 21:2002;39.
33. Mousses S., et al. Clinical and functional target validation using tissue and cell microarrays. Curr. Opin. Chem. Biol. 6:2002;97-101.
34. Camp R.L., et al. Validation of tissue microarray technology in breast carcinoma. Lab. Invest. 80:2000;1943-1949.
35. Simon R., Sauter G. Tissue microarrays for miniaturised high-throughput molecular profiling of tumours. Exp. Hematol. 30:2002;1365-1372.
36. Simon R., et al. Amplification pattern of 12q13-q15 genes (MDM2, CDK4, GLI) in urinary tract bladder cancer. Oncogene. 21:2002;2476-2483.
37. Ziauddin J., Sabatini D.M. Microarrays of cells expressing defined cDNAs. Nature. 411:2001;107-110.
38. Bailey S.N., et al. Applications of transfected cell microarrays in high-throughput drug discovery. Drug Discov. Today. 7:2002;S113-S118.
39. Hannon G.J. RNA interference. Nature. 418:2002;244-251.
40. Wu R.Z., et al. Cell-biological applications of transfected-cell microarrays. Trends Cell Biol. 12:2002;485-488.
41. Schwenk J.M., et al. Cell microarrays: An emerging technology for the characterisation of antibodies. Biotechniques. 33:(Suppl.):2002;54-61.
42. Schulte T.H., et al. Microfluidic technologies in clinical diagnostics. Clin. Chim. Acta. 321:2002;1-10.
43. Berry S. Honey, I've shrunk biomedical technology! Trends Biotechnol. 20:2002;3-4.
44. Khandurina J., Guttman A. Bioanalysis and microfluidic devices. J. Chromatogr. A. 943:2002;159-183.
45. Kuo T.-C., et al. Hybrid three-dimensional nanofluidic/microfluidic devices using molecular gates. Sens. Actuat. A. 102:2003;223-233.
46. Dickert F.L., Sikorski R. Supramolecular strategies in chemical sensing. Mater. Sci. Eng. C. 10:1999;39-46.
47. Schweitz L. Molecularly imprinted polymer coatings for open-tubular capillary electrochromatography prepared by surface initiation. Anal. Chem. 74:2002;1192-1196.
48. Chovan T., Guttman A. Microfabricated devices in biotechnology and biochemical processing. Trends Biotechnol. 20:2002;116-122.
49. Ellson R. Picoliter: enabling precise transfer of nanoliter and picoliter volumes. Drug Discov. Today. 7:2002;S32-S34.
50. Huang N.-P., et al. Biotin-derivatised poly(l-lysine)-g-poly(ethylene glycol): a novel polymeric interface for bioaffinity sensing. Langmuir. 18:2002;220-230.
51. Okuno H., et al. Characterisation of overoxidised polypyrrole colloids imprinted with l-lactate and their application to enantioseparation of amino acids. Anal. Chem. 74:2002;4184-4190.
52. Nicholls I.A., et al. Can we rationally design molecularly imprinted polymers? Anal. Chim. Acta. 435:2001;9-18.
53. Bruggemann O. Chemical reaction engineering using molecularly imprinted polymeric catalysts. Anal. Chim. Acta. 435:2001;197-207.
54. Ye L., et al. Scintillation proximity assay using molecularly imprinted microspheres. Anal. Chem. 74:2002;959-964.
55. Molnar S., Read D. Materials modification for novel application. Physica B. 318:2002;113-118.
56. Huang X., Liu Z. Solid-phase synthesis of 4(h)-quinolone pyrimidine derivatives based on a new scaffold-polymer-bound cyclic malonic acid ester. J. Org. Chem. 67:2002;6731-6737.
57. Cohen M.L. Nanotubes, nanoscience and nanotechnology. Mater. Sci. Eng. C. 15:2001;111.
58. Ryu D.D.Y., Nam D.-H. Biomolecular engineering: a new frontier in biotechnology. J. Mol. Catal. B Enzym. 10:2000;23-37.
59. Xia Y., et al. Surface patterning and its application to wetting/dewetting studies. Curr. Opin. Colloid Interface Sci. 6:2001;54-64.
60. Houseman B., Mrksich M. Towards quantitative assays with peptide chips: a surface engineering approach. Trends Biotechnol. 20:2002;279-281.
61. Bykov V.A. Langmuir-Blodgett films and nanotechnology. Biosens. Bioelectron. 11:1996;923-932.
62. Bogunia-Kubik K., Sugisaka M. From molecular biology to nanotechnology and nanomedicine. Biosystems. 65:2002;123-138.