pH dependence of the reduction of dioxygen to water by cytochrome c oxidase. 2. Branched electron transfer pathways linked by proton transfer

Biochemistry

Volumn 42, Issue 17, 2003, Pages 5074-5090

  Szundi, Istvan ^a   Van Eps, Ned ^a   Einarsdóttir, Ólöf ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

PROTON TRANSFER; TIME RESOLVED SPECTRA;

ABSORPTION SPECTROSCOPY; BIOCHEMISTRY; CONFORMATIONS; ELECTRON TRANSITIONS; LIGHT ABSORPTION; PH EFFECTS; PROTONS; REDUCTION;

ENZYME KINETICS;

CARBON MONOXIDE; CYTOCHROME C OXIDASE; OXYGEN; WATER;

ABSORPTION; ARTICLE; CHEMICAL REACTION KINETICS; ELECTRON TRANSPORT; MATHEMATICAL MODEL; OPTICS; PH; PRIORITY JOURNAL; PROTON TRANSPORT; REACTION ANALYSIS; REDUCTION;

CARBON MONOXIDE; ELECTRON TRANSPORT; ELECTRON TRANSPORT COMPLEX IV; HYDROGEN-ION CONCENTRATION; KINETICS; MODELS, THEORETICAL; OXIDATION-REDUCTION; OXYGEN; PROTONS; SPECTROPHOTOMETRY; WATER;

EID: 0037657608     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi020483e     Document Type: Article

References (81)

1. Ferguson-Miller, S., and Babcock, G. T. (1996) Chem. Rev. 96, 2889-2907.
2. Zaslavsky, D., and Gennis, R. B. (2000) Biochim. Biophys. Acta 1458, 164-179.
3. Hill, B. C., and Greenwood, C. (1984) Biochem. J. 218, 913-921.
4. Oliveberg, M., Brzezinski, P., and Malmström, B. G. (1989) Biochim. Biophys. Acta 977, 322-328.
5. Hill, B. C. (1994) J. Biol. Chem. 269, 2419-2425.
6. Verkhovsky, M. I., Morgan, J. E., and Wikström, M. (1994) Biochemistry 33, 3079-3086.
7. Han. S., Ching, Y.-C., and Rousseau, D. L. (1990) Nature 348, 89-90.
8. Ogura, T., Takahashi, S., Hirota, S., Shinzawa-Itoh, K., Yoshikawa, S., Appleman, E. H., and Kitagawa, T. (1993) J. Am. Chem. Soc. 115, 8527-8536.
9. Varotsis, C., Zhang, Y., Appelman, E. H., and Babcock, G. T. (1993) Proc. Natl. Acad. Sci. U.S.A. 90, 237-241.
10. Han, S., Takahashi, S., and Rousseau, D. L. (2000) J. Biol. Chem. 275, 1910-1919.
11. Georgiadis, K. E., Jhon, N.-I., and Einarsdóttir, Ó. (1994) Biochemistry 33, 9245-9256.
12. Einarsdóttir, Ó., Georgiadis, K. E., and Sucheta, A. (1995) Biochemistry 34, 496-508.
13. Sucheta, A., Georgiadis, K. E., and Einarsdöttir, Ó. (1997) Biochemistry 36, 554-565.
14. Sucheta, A., Szundi, I., and Einarsdóttir, Ó. (1998) Biochemistry 37, 17905-17914.
15. Szundi, I., Liao, G.-L., and Einarsdótter, Ó. (2001) Biochemistry 40, 2332-2339.
16. Einarsdóttir, O., Szundi, I., Van Eps, N., and Sucheta, A. S. (2002) J. Inorg. Biochem. 91, 87-93.
17. Van Eps, N., Szundi, I., and Einarsdóttir, Ó. (2003) Biochemistry 42, 5065-5073.
18. Wrigglesworth, J. M. (1984) Biochem. J. 217, 715-719.
19. Weng, L., and Baker, G. M. (1991) Biochemistry 30, 5727-5733.
20. Fabian, M., and Palmer, G. (1995) Biochemistry 34, 13802-13810.
21. Brittain, T., Little, R. H., Greenwood, C., and Watmough, N. J. (1996) FEBS Lett. 399, 21-25.
22. Jünemann, S., Heathcote, P., and Rich, P. R. (2000) Biochim. Biophys. Acta 1456, 56-66.
23. Fabian, M., and Palmer, F. (2001) Biochemistry 40, 1867-1874.
24. Pecoraro, C., Gennis, R. B., Vygodina, T. V., and Konstantinov, A. A. (2001) Biochemistry 40, 9695-9708.
25. Hug, S. J., Lewis, J. W., Einterz, C. M., Thorgeirsson, T. E., and Kliger, D. S. (1990) Biochemistry 29, 1475-1485.
26. Henry, E. R., and Hofrichter, J. (1992) Methods Enzymol. 210, 129-193.
27. Thorgeirsson, T. E., Lewis, J. W., Wallace-Williams, S. E., and Kliger, D. S. (1993) Biochemistry 32, 13861-13872.
28. Szundi, I., Lewis, J. W., and Kliger, D. S. (1997) Biophys, J. 73, 688-702.
29. Slutter, C. E., Sanders, D., Wittung, P., Malmström, B. G., Aasa, R., Richards, J. H., Gray, H. B., and Fee, J. A. (1996) Biochemistry 35, 3387-3395.
30. Proshlyakov, D. A., Ogura, T., Shinzawa-Itoh, K., Yoshikawa, S., Appelman, E. H., and Kitagawa, T. (1994) J. Biol. Chem. 269, 29385-29388.
31. Proshlyakov, D. A., Ogura, T., Shinzawa-Itoh, K., Yoshikawa, S., and Kitagawa, T. (1996) Biochemistry 35, 76-82.
32. Proshlyakov, D. A., Ogura, T., Shinzawa-Itoh, K., Yoshikawa, S., and Kitagawa, T. (1996) Biochemistry 35, 8580-8586.
33. Proshlyakov, D. A., Pressler, M. A., and Babcock, G. T. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 8020-8025.
34. Fabian, M., Wong, W. W., Gennis, R. B., and Palmer, G. (1999) Proc. Natl. Acad. Sci. U.S.A. 96, 13114-13117.
35. Morgan, J. E., Li, P. M., Jang, D.-J., El-Sayed, M. A., and Chan, S. I. (1989) Biochemistry 28, 6975-6983.
36. Oliveberg, M., and Malmström, B. G. (1991) Biochemistry 30, 7053-7057.
37. Verkhovsky, M. I., Morgan, J. E., and Wikström, M. (1992) Biochemistry 31, 11860-11863.
38. Hallén, S., and Nilsson, T. (1992) Biochemistry 31, 11853-11859.
39. Paula, S., Sucheta, A., Szundi, I., and Einarsdóttir, Ó. (1999) Biochemistry 38, 3025-3033.
40. Ädelroth, P., Ek, M. S., Mitchell, D. M., Gennis, R. B., and Brzezinski, P. (1997) Biochemistry 36, 13824-13829.
41. Hallén, S., Brzezinski, P., and Malmström, B. G. (1994) Biochemistry 33, 1467-1472.
42. Karpefors, M., Adelroth, P., Zhen, Y., Ferguson-Miller, S., and Brzezinski, P. (1998) Proc. Natl. Acad. Sci. U.S.A. 95, 13606-13611.
43. Ädelroth, P., Karpefors, M., Gilderson, G., Tomson, F. L., Gennis, R. B., and Brzezinski, P. (2000) Biochim. Biophys. Acta 1459, 533-539.
44. Watmough, N. J., Cheesman, M. R., Greenwood, C., and Thomson, A. J. (1994) Biochem. J. 300, 469-475.
45. Morgan, J. E., Verkhovsky, M. I., and Wikström, M. (1996) Biochemistry 35, 12235-12240.
46. Hirota, S., Mogi, T., Ogura, T., Hirano, T., Anraku, Y., and Kitagawa, T. (1994) FEBS Lett. 352, 67-70.
47. Wikström, M. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 4051-4054.
48. Wikström, M., and Morgan, J. E. (1992) J. Biol. Chem. 267, 10266-10273.
49. Morgan, J. E., Verkhovsky, M. I., Palmer, G., and Wikström, M. (2001) Biochemistry 40, 6882-6892.
50. Bränden, M., Sigurdsson, J., Namslauer, A., Gennis, R. B., Adelroth, P., and Brzezinski, P. (2001) Proc. Natl. Acad. Sci. U.S.A. 98, 5013-5018.
51. Alben, J. O., Moh, P. P., Fiamingo, F. G., and Altschuld, R. A. (1981) Proc. Natl. Acad. Sci. U.S.A. 78, 234-237.
52. Fiamingo, F. G., Altschuld, R. A., Moh, P. P., and Alben, J. O. (1982) J. Biol. Chem. 257, 1639-1650.
53. Yoshikawa, S., and Caughey, W. S. (1982) J. Biol. Chem. 257, 412-420.
54. Einarsdóttir, Ó., Killough, P. M., Fee, J. A., and Woodruff, W. H. (1989) J. Biol. Chem. 264, 2405-2408.
55. Einarsdóttir, Ó., Dyer, R. B., Lemon, D. D., Killough, P. M., Hubig, S. M., Atherton, S. J., López-Garriga, J. J., Palmer, G., and Woodruff, W. H. (1993) Biochemistry 32, 12013-12024.
56. Wang, J., Takahashi, S., Hosler, J. P., Mitchell, D. M., Ferguson-Miller, S., Gennis, R. B., and Rousseau, D. L. (1995) Biochemistry 34, 9819-9825.
57. Mitchell, D. M., Müller, J. D., Gennis, R. B., and Nienhaus, G. U. (1996) Biochemistry 35, 16782-16788.
58. Rost, B., Behr, J., Hellwig, P., Richter, O. M., Ludwig, B., Michel, H., and Mäntele, W. (1999) Biochemistry 38, 7565-7571.
59. Rich, P. R., and Breton, J. (2001) Biochemistry 40, 6441-6449.
60. Das, K. D., Tomson, F. L., Gennis, R. B., Gordon, M., and Rousseau, D. L. (2001) Biophys. J. 80, 2039-2045.
61. Young, L. J., Einarsdóttir, Ó., Vossbrink, C. R., and Caughey, W. S. (1984) Biochem. Biophys. Res. Commun. 123, 247-253.
62. Fee, J. A., Kuila, D., Mather, M. W., and Yoshida, T. (1986) Biochim. Biophys. Acta 853, 153-185.
63. Einarsdóttir, Ó., Choc, M. G., Weldon, S., and Caughey, W. S. (1988) J. Biol. Chem. 263, 13641-13654.
64. Shimada, H., and Caughey, W. S. (1982) J. Biol. Chem. 257, 11893-11900.
65. Potter, W. T., Tucker, M. P., Houtchens, R. A., and Caughey, W. S. (1987) Biochemistry 26, 4699-4707.
66. Puustinen, A., Bailey, J. A., Dyer, R. B., Mecklenburg, S. L., Wikström, M., and Woodruff, W. H. (1997) Biochemistry 36, 13195-13200.
67. Heitbrink, D., Sigurdson, H., Bolwien, C., Brzezinski, P., and Heberle, J. (2002) Biophys. J. 82, 1-10.
68. Bailey, J. A., Tomson, F. L., Mecklenburg, S. L., MacDonald, G. M., Katsonouri, A., Puustinen, A., Gennis, R. B., Woodruff, W. H., and Dyer, R. B. (2002) Biochemistry 41, 2675-2683.
69. Rich, P. R., Breton, J., Jünemann, S., and Heathcote, P. (2000) Biochim. Biophys. Acta 1459, 475-480.
70. Riistama, S., Hummer, G., Puustinen, A., Dyer, R. B., Woodruff, W. H., and Wikström, M. (1997) FEBS Lett. 414, 275-280.
71. Pomès, R., Hummer, G., and Wikström, W. (1998) Biochim. Biophys. Acta 1365, 255-260.
72. Hofacker, I., and Schulten, K. (1998) Proteins: Struct., Funct., Genet. 30, 100-107.
73. Jünemann, S., Meunier, B., Fisher, N., and Rich, P. R. (1999) Biochemistry 38, 5248-5255.
74. Gennis, R. B. (1998) Biochim. Biophys. Acta 1365, 241-248.
75. Proshlyakov, D. A., Pressler, M. A., DeMaso, C., Leykam, J. F., DeWitt, D. L., and Babcock, G. T. (2000) Science 290, 1588-1591.
76. Watmough, N. J., Katsonouri, A., Little, R. H., Osborne, J. P., Furlong-Nickels, E., Gennis, R. B., Brittain, T., and Greenwood, C. (1997) Biochemistry 36, 13736-13742.
77. Han, S., Ching, Y.-C., and Rousseau, D. L. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 8408-8412.
78. Uchida, T., Mogi, T., and Kitagawa, T. (2000) Biochemistry 39, 6669-6678.
79. Hellwig, P., Behr, J., Ostermeier, C., Richter, O. M., Pfitzner, U., Odenwald, A., Ludwig, B., Michel, H., and Mäntele, W. (1998) Biochemistry 37, 7390-7399.
80. Lübben, M., Prutsch, A., Mamat, B., and Gerwert, K. (1999) Biochemistry 38, 2048-2056.
81. Hellvig, P., Rost, B., and Mäntele, W. (2001) Spectrochim. Acta, Part A 57, 1123-1131.