메뉴 건너뛰기




Volumn 3, Issue , 2002, Pages

The limit fold change model: A practical approach for selecting differentially expressed genes from microarray data

Author keywords

[No Author keywords available]

Indexed keywords

ANIMAL TISSUE; ARTICLE; COMPUTER PROGRAM; CONTROLLED STUDY; DEVICE; DNA MICROARRAY; GENE EXPRESSION; GENE IDENTIFICATION; GENETIC TRANSCRIPTION; IN VITRO STUDY; MALE; MATHEMATICAL COMPUTING; MOUSE; NONHUMAN; REAL TIME POLYMERASE CHAIN REACTION; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA HYBRIDIZATION; VALIDATION PROCESS; ANIMAL; ANTIBODY SPECIFICITY; BIOLOGICAL MODEL; BIOLOGY; CHEMISTRY; DIET; GENE; GENE EXPRESSION PROFILING; GENETIC VARIABILITY; GENETICS; LIVER; METABOLISM; METHODOLOGY; MOUSE STRAIN; VALIDATION STUDY;

EID: 0037590376     PISSN: 14712105     EISSN: None     Source Type: Journal    
DOI: 10.1186/1471-2105-3-17     Document Type: Article
Times cited : (151)

References (30)
  • 1
    • 0034714421 scopus 로고    scopus 로고
    • Gene expression data analysis
    • Brazma A, Vilo J: Gene expression data analysis. FEBS Lett 2000, 480:17-24
    • (2000) FEBS Lett. , vol.480 , pp. 17-24
    • Brazma, A.1    Vilo, J.2
  • 2
    • 0345849436 scopus 로고    scopus 로고
    • Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press
    • Ptashne M, Gann A: Genes & Signals. Cold Spring Harbor, New York: Cold Spring Harbor Laboratory Press 2002
    • (2002) Genes & Signals
    • Ptashne, M.1    Gann, A.2
  • 3
    • 0031721161 scopus 로고    scopus 로고
    • Ligand assays: From electrophoresis to miniaturized microarrays
    • Ekins RP: Ligand assays: from electrophoresis to miniaturized microarrays. Clin Chem 1998, 44:2015-2030
    • (1998) Clin. Chem. , vol.44 , pp. 2015-2030
    • Ekins, R.P.1
  • 4
    • 0030669030 scopus 로고    scopus 로고
    • Exploring the metabolic and genetic control of gene expression on a genomic scale
    • DeRisi JL, Iyer VR, Brown PO: Exploring the metabolic and genetic control of gene expression on a genomic scale. Science 1997, 278:680-686
    • (1997) Science , vol.278 , pp. 680-686
    • DeRisi, J.L.1    Iyer, V.R.2    Brown, P.O.3
  • 8
    • 0034948896 scopus 로고    scopus 로고
    • A Bayesian framework for the analysis of microarray expression data: Regularized t-test and statistical inferences of gene changes
    • Baldi P, Long AD: A Bayesian framework for the analysis of microarray expression data: regularized t-test and statistical inferences of gene changes. Bioinformatics 2001, 17:509-519
    • (2001) Bioinformatics , vol.17 , pp. 509-519
    • Baldi, P.1    Long, A.D.2
  • 9
    • 0035375137 scopus 로고    scopus 로고
    • Computational analysis of microarray data
    • Quackenbush J: Computational analysis of microarray data. Nat Rev Genet 2001, 2:418-427
    • (2001) Nat. Rev. Genet. , vol.2 , pp. 418-427
    • Quackenbush, J.1
  • 10
    • 0034729586 scopus 로고    scopus 로고
    • A fuzzy logic approach to analyzing gene expression data
    • Woolf PJ, Wang Y: A fuzzy logic approach to analyzing gene expression data. Physiol Genomics 2000, 3:9-15
    • (2000) Physiol. Genomics , vol.3 , pp. 9-15
    • Woolf, P.J.1    Wang, Y.2
  • 11
    • 0034911875 scopus 로고    scopus 로고
    • An efficient and robust statistical modeling approach to discover differentially expressed genes using genomic expression profiles
    • Thomas JG, Olson JM, Tapscott SJ, Zhao LP: An efficient and robust statistical modeling approach to discover differentially expressed genes using genomic expression profiles. Genome Res 2001, 11:1227-1236
    • (2001) Genome Res. , vol.11 , pp. 1227-1236
    • Thomas, J.G.1    Olson, J.M.2    Tapscott, S.J.3    Zhao, L.P.4
  • 12
    • 0032837252 scopus 로고    scopus 로고
    • Computational methods for the identification of differential and coordinated gene expression
    • Claverie JM: Computational methods for the identification of differential and coordinated gene expression. Hum Mol Genet 1999, 8:1821-1832
    • (1999) Hum. Mol. Genet. , vol.8 , pp. 1821-1832
    • Claverie, J.M.1
  • 14
    • 0034724389 scopus 로고    scopus 로고
    • Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion
    • Coller HA, Grandori C, Tamayo P, Colbert T, Lander ES, Eisenman RN, Golub TR: Expression analysis with oligonucleotide microarrays reveals that MYC regulates genes involved in growth, cell cycle, signaling, and adhesion. Proc Natl Acad Sci U S A 2000, 97:3260-3265
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 3260-3265
    • Coller, H.A.1    Grandori, C.2    Tamayo, P.3    Colbert, T.4    Lander, E.S.5    Eisenman, R.N.6    Golub, T.R.7
  • 16
    • 0034610286 scopus 로고    scopus 로고
    • Genome-wide study of aging and oxidative stress response in Drosophila melanogaster
    • Zou S, Meadows S, Sharp L, Jan LY, Jan YN: Genome-wide study of aging and oxidative stress response in Drosophila melanogaster. Proc Natl Acad Sci U S A 2000, 97:13726-13731
    • (2000) Proc. Natl. Acad. Sci. U. S. A. , vol.97 , pp. 13726-13731
    • Zou, S.1    Meadows, S.2    Sharp, L.3    Jan, L.Y.4    Jan, Y.N.5
  • 17
    • 0346942394 scopus 로고    scopus 로고
    • Monitoring expression of genes involved in drug metabolism and toxicology using DNA microarrays
    • Gerhold D, Lu M, Xu J, Austin C, Caskey CT, Rushmore T: Monitoring expression of genes involved in drug metabolism and toxicology using DNA microarrays. Physiol Genomics 2001, 5:161-170
    • (2001) Physiol. Genomics , vol.5 , pp. 161-170
    • Gerhold, D.1    Lu, M.2    Xu, J.3    Austin, C.4    Caskey, C.T.5    Rushmore, T.6
  • 20
    • 0033610079 scopus 로고    scopus 로고
    • Gene expression profile of aging and its retardation by caloric restriction
    • Lee CK, Klopp RG, Weindruch R, Prolla TA: Gene expression profile of aging and its retardation by caloric restriction. Science 1999, 285:1390-1393
    • (1999) Science , vol.285 , pp. 1390-1393
    • Lee, C.K.1    Klopp, R.G.2    Weindruch, R.3    Prolla, T.A.4
  • 21
    • 0035942222 scopus 로고    scopus 로고
    • Influences of aging and caloric restriction on the transcriptional profile of skeletal muscle from rhesus monkeys
    • Kayo T, Allison DB, Weindruch R, Prolla TA: Influences of aging and caloric restriction on the transcriptional profile of skeletal muscle from rhesus monkeys. Proc Natl Acad Sci U S A 2001, 98:5093-5098
    • (2001) Proc. Natl. Acad. Sci. U. S. A. , vol.98 , pp. 5093-5098
    • Kayo, T.1    Allison, D.B.2    Weindruch, R.3    Prolla, T.A.4
  • 23
    • 0035029867 scopus 로고    scopus 로고
    • Identification of novel cytokine-induced genes in pancreatic beta-cells by high-density oligonucleotide arrays
    • Cardozo AK, Kruhoffer M, Leeman R, Orntoft T, Eizirik DL: Identification of novel cytokine-induced genes in pancreatic beta-cells by high-density oligonucleotide arrays. Diabetes 2001, 50:909-920
    • (2001) Diabetes , vol.50 , pp. 909-920
    • Cardozo, A.K.1    Kruhoffer, M.2    Leeman, R.3    Orntoft, T.4    Eizirik, D.L.5
  • 25
    • 0035057561 scopus 로고    scopus 로고
    • Validation of array-based gene expression profiles by real-time (kinetic) RTPCR
    • Rajeevan MS, Vernon SD, Taysavang N, Unger ER: Validation of array-based gene expression profiles by real-time (kinetic) RTPCR. J Mol Diagn 2001, 3:26-31
    • (2001) J. Mol. Diagn. , vol.3 , pp. 26-31
    • Rajeevan, M.S.1    Vernon, S.D.2    Taysavang, N.3    Unger, E.R.4
  • 26
    • 0035888333 scopus 로고    scopus 로고
    • Human disease characterization: Real-time quantitative PCR analysis of gene expression
    • Snider JV, Wechser MA, Lossos IS: Human disease characterization: real-time quantitative PCR analysis of gene expression. Drug Discov Today 2001, 6:1062-1067
    • (2001) Drug Discov. Today , vol.6 , pp. 1062-1067
    • Snider, J.V.1    Wechser, M.A.2    Lossos, I.S.3
  • 29
    • 0035861586 scopus 로고    scopus 로고
    • Gonadotropin releasing hormone receptor-coupled gene gene network organization
    • Wurmbach E, Yuen T, Ebersole BJ, Sealfon SC: Gonadotropin releasing hormone receptor-coupled gene gene network organization. J Biol Chem 2001, 276:47195-47201
    • (2001) J. Biol. Chem. , vol.276 , pp. 47195-47201
    • Wurmbach, E.1    Yuen, T.2    Ebersole, B.J.3    Sealfon, S.C.4
  • 30
    • 0035202091 scopus 로고    scopus 로고
    • Rapid quantification of human ABCA1 mRNA in various cell types and tissues by real-time reverse transcription-PCR
    • Kielar D, Dietmaier W, Langmann T, Aslanidis C, Probst M, Naruszewicz M, Schmitz G: Rapid quantification of human ABCA1 mRNA in various cell types and tissues by real-time reverse transcription-PCR. Clin Chem 2001, 47:2089-2097
    • (2001) Clin. Chem. , vol.47 , pp. 2089-2097
    • Kielar, D.1    Dietmaier, W.2    Langmann, T.3    Aslanidis, C.4    Probst, M.5    Naruszewicz, M.6    Schmitz, G.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.