Molecular recognition in terms of a dimensionless index. 1. A theoretical model of the orientation-based fit and its applicability to ligand - Macromolecule systems

Journal of Physical Chemistry B

Volumn 107, Issue 15, 2003, Pages 3576-3584

  Chen, Jian ^a  

^a ZHEJIANG UNIVERSITY OF TECHNOLOGY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

MOLECULAR RECOGNITION;

COMPLEXATION; ENTHALPY; ENTROPY; MATHEMATICAL MODELS; MOLECULAR ORIENTATION; POLYETHYLENE GLYCOLS; THERMODYNAMICS;

MACROMOLECULES;

EID: 0037451982     PISSN: 10895647     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp026570y     Document Type: Article

References (45)

1. Reinhoudt, D. N.; Crego-Calama, M. Science 2002, 295, 2403-2407.
2. Lehn, J.-M. Angew. Chem., Int. Ed. Engl. 1988, 27, 89.
3. McCammon, J. A. Curr. Opin. Struct. Biol. 1998, 8, 245-249.
4. Muller-Dethlefs, K.; Hobza, P. Chem. Rev. 2000, 100, 143-167.
5. Verkhivker, G. M.; Bouzida, D.; Gehlhaar, D. K.; Rejto, P. A.; Freer; S. T.; Rose, P. W. Curr. Opin. Struct. Biol. 2002, 12, 197-203
6. Cera, E. D. Chem. Rev. 1998, 98, 1563.
7. Berne, B. J.; Straub, J. E. Curr. Opin. Struct. Biol. 1997, 7, 181.
8. Jelesarov, I.; Bosshard, H. R. J. Mol. Recognit. 1999, 12, 3-18.
9. Lin, F.; Chen, W.; Hearn, M. T. W. J. Mol. Recognit. 2002, 15, 55-93.
10. Inoue, Y.; Hakushi, T.; Liu, Y.; Tong, L. H.; Shen, B. J.; Jin, D. S. J. Am. Chem. Soc. 1993, 775, 475-481 and references therein.
11. Rekharsky, M. V.; Inoue, Y. Chem. Rev. 1998, 98, 1875-1917 and references therein.
12. Connors, K. A. Chem. Rev. 1997, 97, 1325.
13. Flory, P. J. Discuss. Faraday Soc. 1970, 49, 7-29.
14. Panayiotou, C.; Sanchez, I. C. Macromolecules 1991, 24, 6231.
15. Abraham, M. H.; Andonian-Haftran, J.; Du, C. M.; Diart, V.; Whiting, G. S.; Grate, J. W.; McGill, R. A. J. Chem. Soc., Perkin Trans. 2 1995, 369-378.
16. Donohue, M.; Iconomou, I. G. E. Fluid Phase Equilib. 1996, 116, 518.
17. Tapia, O. In Theoretical Treatment of Large Molecules and Their Interactions; Maksic, Z. B., Ed.; Springer-Verlag: Berlin, 1991; Vol. 4, p 435.
18. Angyán, J. G. J. Math. Chem. 1992, 10, 93.
19. Sánchez, M. L.; Martín, M. E.; Aguilar, M. A.; Olivares, F. J. J. Comput. Chem. 2000, 21, 705-715.
20. Kawai, S.; Arakawa, K. Bull. Chem. Soc. Jpn. 1990, 63, 307-314.
21. Chen, J., submitted to J. Phys. Chem.
22. Searle, M. S.; Williams, D. H. J. Am. Chem. Soc. 1992, 114, 10690.
23. Kirchhoff, P. D.; Dutasta, J.-P.; Collet, A.; McCammon, J. A. J. Am. Chem. Soc. 1999, 121, 381-390.
24. Berthod, A.; Li, W.; Armstrong, D. W. Anal. Chem. 1992, 64, 873-879.
25. Rohrschneider, L. J. Chromatogr. 1966, 22, 6.
26. Regen, S. L.; Besse, J. J.; McLick, J. J. Am. Chem. Soc. 1979, 101, 116.
27. Regen, S. L.; Besse, J. J. J. Am. Chem. Soc. 1978, 700, 7117.
28. (a) Kuhl, T. L.; Berman, A. D.; Hui, S. W.; Israelachvili, J. N. Macromolecules 1998, 31, 8258.
29. (b) Kikuchi, Y.; Sakamoto, Y.; Sawada, K. J. Chem. Soc., Faraday Trans. 1998, 94, 105.
30. Yang, X.; Su, Z.; Wu, D.; Hsu, S. L.; Stidham, H. D. Macromolecules 1997, 30, 3796.
31. Wang, R. L. C.; Kreuzer, H. J.; Grunze, M. Phys. Chem. Chem. Phys. 2000, 2 (16), 3613-3622.
32. Chirila, T. V.; Rakoczy, P. E.; Garrett, K. L.; Lou, X.; Constable, I. J. Biomaterials 2002, 23, 321-342.
33. Tirosh, O.; Barenholz, Y.; Katzhendler, J.; Priev, A. Biophys. J. 1998, 74, 1371-1379.
34. Torchilin, V. P.; Papisov, M. I. J. Lipid Res. 1994, 4, 725-739.
35. Chiu, G. N. C.; Bally, M. B.; Mayer, L. D. Biochim. Biophys. Acta 2001, 7570, 56-69.
36. Flory, P. J. Statistical Mechanics of Chain Molecules; Wiley-Interscience: New York, 1969.
37. Lipkowitz, K.; Green, K. M.; Yang, J.; Pearl, G.; Peterson, M. A. Chirality 1993, 5, 57.
38. (a) Armstrong, D. W.; Ward, T. J.; Armstrong, R. D.; Beesly, T. E. Science 1986, 232, 1132.
39. (b) Colonna, S.; Manifredi, A.; Annunziata, R.; Gaggero, N.; Casella, L. J. Org. Chem. 1990, 15, 5862.
40. (a) Lehn, J. M. Science 1985, 227, 849.
41. (b) Rebek, J. Science 1987, 235, 1478-1484.
42. Sun, D.-Z.; Chen, J.; Lu, W.-M.; Zheng, X.-M. Thermochim. Acta 2000, 351 (1-2), 1-7.
43. (a) Krug, R. R.; Hunter, W. G.; Grieger, R. A. J. Phys. Chem. 1976, 80, 2335; 1976, 80, 2341.
44. (a) Krug, R. R.; Hunter, W. G.; Grieger, R. A. J. Phys. Chem. 1976, 80, 2335; 1976, 80, 2341.
45. (b) Grunwald, E.; Steel, C. J. Am. Chem. Soc. 1995, 117, 5687.