Quantitative charge state analysis of manganese biominerals in aqueous suspension using scanning transmission X-ray microscopy (STXM)

Geochimica et Cosmochimica Acta

Volumn 67, Issue 6, 2003, Pages 1089-1098

  Pecher, K ^a,f   McCubbery, D ^b,f   Kneedler, E ^c   Rothe, J ^d   Bargar, J ^e   Meigs, G ^f   Cox, L ^g   Nealson, K ^g   Tonner, B ^a  

^a UNIVERSITY OF CENTRAL FLORIDA   (United States)

^b OREGON HEALTH AND SCIENCE UNIVERSITY   (United States)

^c Surface/Interface Inc   (United States)

^d KARLSRUHE INSTITUTE OF TECHNOLOGY   (Germany)

^e SLAC NATIONAL ACCELERATOR LABORATORY   (United States)

^f LAWRENCE BERKELEY NATIONAL LABORATORY   (United States)

^g UNIVERSITY OF SOUTHERN CALIFORNIA   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

AQUEOUS SOLUTION; BIOMINERALIZATION; CATION EXCHANGE CAPACITY; ELECTRON; MANGANESE; REDOX CONDITIONS; X-RAY SPECTROSCOPY;

EID: 0037443981     PISSN: 00167037     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0016-7037(02)01229-2     Document Type: Article

References (48)

1. Ade H. (1998) X-ray spectromicroscopy. Exp. Meth. Phys. Sci. 32 225-262.
2. Attwood D. (2000) Soft X-rays and extreme ultraviolet radiation. Cambridge University Press. Banfield J.F. and Nealson K.H. (1997) Geomicrobiology: Interactions between microbes and minerals. Reviews in Mineralogy. Vol. 35 Mineralogic Society of America, Washington D.C.
3. Bargar J. R., Tebo B. M., and Villinski J. E. (2000) In situ characterization of Mn(II) oxidation by spores of the marine Bacillus s.p. strain SG-1. Geochim. Cosmochim. Acta 64, 2775-2778.
4. Barker W. W., and Banfield J. F. (1996) Biologically versus inorganically mediated weathering reactions: relationships between minerals and extracellular microbial polymers in lithobiontic communities. Chem. Geol. 132, 55-69.
5. Behrens P. (1992) X-ray absorption spectroscopy in chemistry II. X-ray absorption near edge structure. Trends Anal. Chem. 11, 237-244.
6. Bergmann U., Horne C. R., Collins T. J., Workman J. M., and Cramer S. P. (1999) Chemical Dependence of Interatomic X-Ray Transition Energies and Intensities-A Study of Mn Kβ" and Kβ2,5 Spectra. Chem. Phys. Lett. 302, 119-124.
7. Bergmann U., Glatzel P., Robblee J. H., Messinger J., Fernandez C., Cinco R., Visser H., McFarlane K., Bellacchio E., Pizarro S., Sauer K., Yachandra V. K., Klein M. P., Cox B. L., Nealson K. H., and Cramer S. P. (2001) High-resolution X-ray spectroscopy of rare events: a different look at local structure and chemistry. J. Synch. Rad. 8, 199-203.
8. Beveridge T. J., Makin S. A., Kadurugamuwa J. L., and Li Z. (1997) Interactions between biofilms and the environment. FEMS Microbiol. Rev. 20, 291-303.
9. Bidoglio G., Gibson P. N. O'Gorman M., and Roberts K. J. (1993) X-ray absorption spectroscopy investigation of surface redox transformations of thallium and chromium on colloidal mineral oxides. Geochim. Cosmochim. Acta 57, 2389-2394.
10. Chen J. G. (1997) NEXAFS investigation of transition metal oxides, nitrides, carbides, sulfides and other interstitial compounds. Surf. Sci. Rep. 30, 1-152.
11. Cramer S. P., de Groot F. M., Ma Y., Chen C. T., Sette F., Kipke C. A., Eichhorn D. M., McKee V., Mullins O. C., and Fuggle J. C. (1991) Ligand field strength and oxidation states from manganese L-edge spectroscopy. J. Am. Chem. Soc. 113, 7937-7940.
12. Cressey G., Henderson C. M. B., and van der Laan G. (1993) Use of L-edge X-ray absorption spectroscopy to characterize multiple valence states of 3 d transition metals; a new probe for mineralogical and geochemical research. Phys. Chem. Min. 20, 111-119.
13. Crocombette J. P., and Jollet F. (1996) Covalency effect on cation 2p x-ray absorption spectroscopy in 3d transition-metal oxides. J. Phys. Condens. Matt. 8, 5253.
14. de Groot F. (2001) High-Resolution X-ray. Emission and X-ray Absorption Spectroscopy. Chem. Rev. 101, 1779-1808.
15. de Groot F. M. (1994) X-ray absorption and dichroism of ransition metals and their compounds. J. Electr. Spectr. Rel. Phenom. 67, 529-622.
16. de Groot F. M., Fuggle J. C., Thole B. T., and Sawatzky G. A. (1990) 2p x-ray absorption of 3d transition-metal compounds: An atomic multiplet description including the crystal field. Phys. Rev. B. 42, 5459-5468.
17. de Vrind J. P., de Vrind-de Jong E. W., de Voogt J. -W, Westbroek P., Boogerd F. C., and Rosson R. A. (1986) Manganese oxidation by spores and spore coats of a marine Bacillus species. Appl. Env. Microb. 52, 1096-1100.
18. Droubay T. (1998) Soft X-ray spectroscopy and micro-spectroscopy of magnetic and naturally occuring materials. PhD Thesis, University of Wisconsin at Milwaukee.
19. Droubay T., Mursky G., and Tonner B. P. (1997) High-resolution X-ray absorption microspectroscopy of lamellar phases in natural ilmenite. J. Elec. Spec. 84, 159-169.
20. Garvie L. A. J., and Craven A. J. (1994) High resolution parallel electron energy-loss spectroscopy of Mn L2,3-edges in inorganic mangenese compounds. Phys. Chem. Min. 21, 191-206.
21. Grush M. M., Chen J., Stemmler T. L., George S. J., Ralston C. Y., Stibrany R. T., Gelasco A., Christou G., Gorun S. M., Penner-Hahn J. E., and Cramer S. P. (1996) Manganese L-edge X-ray Absorption Spectroscopy of Manganese catalase from Lactobacillus plantarum and mixed valence mangenese complexes. J. Am. Chem. Soc. 118, 65-69.
22. Grush M. M., Muramatsu Y., Underwood J. H., Gullikson E. M., Ederer D. L., Perera R. C., and Callcott T. A. (1998) Soft X-ray emission and absorption-a comparative study on the snsitivity to oxidation state and ligand environment of transition metal complexes. J. Electr. Spectr. Rel. Phenom. 92, 225-229.
23. 4 electrode materials: A study using the technique of soft X-ray absorption and emission. Chem. Mat. 12, 659-664.
24. Hastings D., and Emerson S. (1986) Oxidation of manganese by spores of a marine Bacillus: Kinetic and thermodynamic considerations. Geochim. Cosmochim. Acta 50, 1819-1824.
25. Henke B. L., Gullikson E. M., and Davis J. C. (1993) X-ray interactions: photoabsorption, scattering, transmission, and reflection at E=50-30000 eV, Z=1-92. Atom. Data Nucl. Data Tab. 54, 181-342.
26. Kawai J., Mizutani Y., Sugimura T., Sai M., Higuchi T., Harada Y., Ishiwata Y., Fukushima A., Fujisawa M., Watanabe M., Maeda K., Shin S., and Goshi Y. (2000) High resolution soft X-ray absorption spectroscopy for the chemical state analysis of Mn. Spectrochim. Acta Part B. 55, 1385-1395.
27. Kirz J., Jacobsen C., and Howells M. (1995) Soft X-ray microscopes and their biological applications. Q. Rev. Biophysics. 28, 33-130.
28. Manceau A., Charlet L., Boisset M., Didier B., and Spandini L. (1992) Sorption and speciation of heavy metals on hydrous Fe and Mn oxides. From microscopic to macroscopic. Appl. Clay Sci. 7, 201-223.
29. Mandernack K. W., Post J., and Tebo B. M. (1995) Manganese mineral formation by bacterial spores of the marine Bacillus, strain SG-1: Evidence for the direct oxidation of Mn(II) to Mn(IV). Geochim. Cosmochim. Acta 59, 4393-4408.
30. 4 (Hausmannite) by spore coats of a marine Bacillus sp. Appl. Env. Microb. 54, 2140-2143.
31. McArdell C. S., Stone A. T., and Tian J. (1998) Reaction of EDTA and related aminocarboxylate chelating agents with CoIIIOOH(heterogenite) and MnIIIOOH(manganite). Env. Sci. Tech. 32, 2923-2930.
32. Murray J. W. (1974) The surface chemistry of hydrous Manganese Dioxide. J. Coll. Inter. Sci 46, 375-371.
33. Murray L. W., Balistrieri L. S., and Paul B. (1984) The oxidation state of manganese in marine sediments and ferromanganese nodules. Geochim. Cosmochim. Acta 48, 1237-1247.
34. Nealson K. H. (1997) Sediment bacteria: Who's there, what are they doing, and what's new?. Annu. Rev. Earth Planet. Sci. 25, 403-434.
35. Nealson K. H., and Tebo B. M. (1988) Occurence and mechanisms of microbial oxidation of Manganese. Adv. Appl. Microbiol. 33, 279-318.
36. O'Brian W. L., and Tonner B. P. (1994) Orbital and spin sum rules in x-ray magnetic circular dichroism. Phys. Rev. B. 50, 12672-12681.
37. Pearson D. H., Fultz B., and Ahn C. C. (1988) Measurements of 3d state occupancy in transition metals using electron energy loss spectrometry. Appl. Phys. Lett. 53, 1405-1407.
38. Rosson R. A., and Nealson K. H. (1982) Manganese binding and oxidation by spores of a marine bacillus. J. Bacteriol. 151, 1027-1034.
39. Rothe J., Kneedler E. M., Pecher K., Tonner B. P., Nealson K. H., Grundl T., Meyer-Ilse W., and Warwick T. (1999) Spectromicroscopy of Mn distributions in micronodules produced by biomineralization. J. Synchrot. Rad. 6, 359-361.
40. Schofield P. F., Henderson C. M. B., Cressey G., and van der Laan G. (1995) 2p X-ray absorption spectroscopy in earth science. J. Synchrot. Rad. 2, 93-98.
41. Silvester E., Charlet L., and Manceau A. (1995) Mechanism of Chromium(III oxidation by Na-Buserite. J. Phys. Chem. 99, 16662-16669.
42. Smith R. W., and Jenne E. A. (1991) Recalculation, evaluation, and prediction of surface complexation constants for metal adsorption on iron and manganese oxides. Env. Sci. Tech. 25, 525-531.
43. Stöhr, J. (1996) NEXAFS Spectroscopy.: Springer, Berlin. Tebo B.M., Ghiorse W.C., van Waasbergen L.G., Siering P.L. and Caspil R. (1997) Bacterially mediated mineral formation: Insights into manganese(II) oxidation from molecular genetic and biochemical studies. In Reviews in Mineralogy, Geomicrobiology: Interactions between microbes and minerals, Vol. 35, pp. 225-266. Mineralogical Society of America, Washington D.C.
44. Tonner B. P., Droubay T., Denlinger J., Meyer-Ilse W., Rothe J., Kneedler E., Pecher K., Nealson K., and Grundl T. (1999) Soft X-ray spectroscopy and imaging of interfacial chemistry in environmental specimens. Surf. Interf. Anal. 27, 247-258.
45. Ulrich M. J., and Stone A. T. (1989) The oxidation of chlorophenols adsorbed to Manganese oxid surfaces. Env. Sci. Tech. 23, 421-428.
46. van der Laan G., and Kirkman I. W. (1992) The 2p absorption spectra of 3d transition metal compounds in tetrahedral and octahedral symmetry. J. Phys.: Cond. Matt. 4, 4189-4204.
47. Warwick T., Ade H., Hitchcock A. P., Padmore H., Rightor Ed .G, and Tonner B. P. (1997) Soft X-ray spectromicroscopy development for materials science at the advanced light source. J. Electr. Spec. 84, 85-98.
48. Warwick T., Franck K., Kortright J. B., Meigs G., Moronne M., Myneni S., Rotenberg E., Seal S., Steele W. F., Ade H., Garcia A., Cerasari S., Denlinger J., Hayakawa S., Hitchcock A. P., Tyliszczak T., Kikuma J., Rightor E. G., Shin H.-J, and Tonner B. P. (1998) A scanning transmission x-ray microscope for materials science spectromicroscopy at the Advanced Light Source. Rev. Sci. Instr. 69, 2964-2973.