Drosophila proteasome regulator REGγ: Transcriptional activation by DNA replication-related factor DREF and evidence for a role in cell cycle progression

Journal of Molecular Biology

Volumn 327, Issue 5, 2003, Pages 1001-1012

  Masson, Patrick ^a   Lundgren, Josefin ^a   Young, Patrick ^a  

^a STOCKHOLM UNIVERSITY   (Sweden)

Author keywords

DRE; DREF; PA28 ; Proteasome; REG

Indexed keywords

DNA REPLICATION RELATED ELEMENT BINDING FACTOR; PROTEASOME; PROTEIN REGGAMMA; RNA; TRANSCRIPTION FACTOR; UNCLASSIFIED DRUG;

AMINO ACID SEQUENCE; ANIMAL CELL; ANIMAL TISSUE; ARTICLE; CELL CYCLE; CELL CYCLE G1 PHASE; CELL CYCLE S PHASE; CELL DIVISION; CELL NUCLEUS; CELL VOLUME; CELLULAR DISTRIBUTION; CONTROLLED STUDY; DISPERSION; DNA REPLICATION; DROSOPHILA; EMBRYO; EMBRYO DEVELOPMENT; GASTRULATION; GENE MUTATION; GENE SEQUENCE; GENETIC TRANSCRIPTION; IMMUNOHISTOCHEMISTRY; INSECT CELL; MITOSIS; NONHUMAN; PRIORITY JOURNAL; PROMOTER REGION; PROTEIN DEPLETION; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN MOTIF; REGULATORY MECHANISM; TATA BOX; TRANSCRIPTION INITIATION; TRANSCRIPTION REGULATION;

DROSOPHILA; METAZOA;

EID: 0037432546     PISSN: 00222836     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0022-2836(03)00188-8     Document Type: Article

References (42)

1. Groll M., Ditzel L., Lowe J., Stock D., Bochtler M., Bartunik H.D., Huber R. Structure of 20 S proteasome from yeast at 2.4 Å resolution. Nature. 386:1997;463-471.
2. Orlowski M., Wilk S. Catalytic activities of the 20 S proteasome, a multicatalytic proteinase complex. Arch. Biochem. Biophys. 383:2000;1-16.
3. Schmidt M., Schmidtke G., Kloetzel P.M. Structure and structure formation of the 20 S proteasome. Mol. Biol. Rep. 24:1997;103-112.
4. Unno M., Mizushima T., Morimoto Y., Tomisugi Y., Tanaka K., Yasuoka N., Tsukihara T. The structure of the mammalian 20 S proteasome at 2.75 Å resolution. Structure (Camb). 10:2002;609-618.
5. Davies K.J. Degradation of oxidized proteins by the 20 S proteasome. Biochimie. 83:2001;301-310.
6. Hill C.P., Masters E.I., Whitby F.G. The 11S regulators of 20 S proteasome activity. Curr. Top. Microbiol. Immunol. 268:2002;73-89.
7. Zhang Z., Krutchinsky A., Endicott S., Realini C., Rechsteiner M., Standing K.G. Proteasome activator 11S REG or PA28: recombinant REG alpha/REG beta hetero-oligomers are heptamers. Biochemistry. 38:1999;5651-5658.
8. Johnston S.C., Whitby F.G., Realini C., Rechsteiner M., Hill C.P. The proteasome 11S regulator subunit REG alpha (PA28 alpha) is a heptamer. Protein Sci. 6:1997;2469-2473.
9. Soza A., Knuehl C., Groettrup M., Henklein P., Tanaka K., Kloetzel P.M. Expression and subcellular localization of mouse 20 S proteasome activator complex PA28. FEBS Letters. 413:1997;27-34.
10. Brooks P., Fuertes G., Murray R.Z., Bose S., Knecht E., Rechsteiner M.C., et al. Subcellular localization of proteasomes and their regulatory complexes in mammalian cells. Biochem. J. 346:2000;155-161.
11. Schwarz K., Eggers M., Soza A., Koszinowski U.H., Kloetzel P.M., Groettrup M. The proteasome regulator PA28alpha/beta can enhance antigen presentation without affecting 20 S proteasome subunit composition. Eur. J. Immunol. 30:2000;3672-3679.
12. Minami Y., Kawasaki H., Minami M., Tanahashi N., Tanaka K., Yahara I. A critical role for the proteasome activator PA28 in the Hsp90-dependent protein refolding. J. Biol. Chem. 275:2000;9055-9061.
13. Cascio P., Call M., Petre B.M., Walz T., Goldberg A.L. Properties of the hybrid form of the 26S proteasome containing both 19 S and PA28 complexes. EMBO J. 21:2002;2636-2645.
14. Realini C., Jensen C.C., Zhang Z., Johnston S.C., Knowlton J.R., Hill C.P., Rechsteiner M. Characterization of recombinant REGalpha, REGbeta, and REGgamma proteasome activators. J. Biol. Chem. 272:1997;25483-25492.
15. Masson P., Andersson O., Petersen U.M., Young P. Identification and characterization of a Drosophila nuclear proteasome regulator. A homolog of human 11 S REGgamma (PA28gamma). J. Biol. Chem. 276:2001;1383-1390.
16. Murata S., Kawahara H., Tohma S., Yamamoto K., Kasahara M., Nabeshima Y., et al. Growth retardation in mice lacking the proteasome activator PA28gamma. J. Biol. Chem. 274:1999;38211-38215.
17. Nikaido T., Shimada K., Shibata M., Hata M., Sakamoto M., Takasaki Y., et al. Cloning and nucleotide sequence of cDNA for Ki antigen, a highly conserved nuclear protein detected with sera from patients with systemic lupus erythematosus. Clin. Expt. Immunol. 79:1990;209-214.
18. Tojo T., Kaburaki J., Hayakawa M., Okamoto T., Tomii M., Homma M. Precipitating antibody to a soluble nuclear antigen "Ki" with specificity for systemic lupus erythematosus. Ryumachi. 21:1981;129-140.
19. Nikaido T., Shimada K., Nishida Y., Lee R.S., Pardee A.B., Nishizuka Y. Loss in transformed cells of cell cycle regulation of expression of a nuclear protein recognized by SLE patient antisera. Expt. Cell Res. 182:1989;284-289.
20. Hirose F., Yamaguchi M., Handa H., Inomata Y., Matsukage A. Novel 8-base pair sequence (Drosophila DNA replication-related element) and specific binding factor involved in the expression of Drosophila genes for DNA polymerase alpha and proliferating cell nuclear antigen. J. Biol. Chem. 268:1993;2092-2099.
21. Hirose F., Yamaguchi M., Matsukage A. Targeted expression of the DNA binding domain of DRE-binding factor, a Drosophila transcription factor, attenuates DNA replication of the salivary gland and eye imaginal disc. Mol. Cell. Biol. 19:1999;6020-6028.
22. Hirose F., Ohshima N., Shiraki M., Inoue Y.H., Taguchi O., Nishi Y., et al. Ectopic expression of DREF induces DNA synthesis, apoptosis, and unusual morphogenesis in the Drosophila eye imaginal disc: possible interaction with Polycomb and trithorax group proteins. Mol. Cell. Biol. 21:2001;7231-7242.
23. Yamaguchi M., Hirose F., Nishimoto Y., Naruge T., Ikeda M., Hachiya T., et al. Expression patterns of DNA replication enzymes and the regulatory factor DREF during Drosophila development analyzed with specific antibodies. Biol. Cell. 85:1995;147-155.
24. Hirose F., Yamaguchi M., Kuroda K., Omori A., Hachiya T., Ikeda M., et al. Isolation and characterization of cDNA for DREF, a promoter-activating factor for Drosophila DNA replication-related genes. J. Biol. Chem. 271:1996;3930-3937.
25. Kutach A.K., Kadonaga J.T. The downstream promoter element DPE appears to be as widely used as the TATA box in Drosophila core promoters. Mol. Cell. Biol. 20:2000;4754-4764.
26. Tsuda L., Nagaraj R., Zipursky S.L., Banerjee U. An EGFR/Ebi/Sno pathway promotes delta expression by inactivating Su(H)/SMRTER repression during inductive notch signaling. Cell. 110:2002;625-637.
27. Clemens J.C., Worby C.A., Simonson-Leff N., Muda M., Maehama T., Hemmings B.A., Dixon J.E. Use of double-stranded RNA interference in Drosophila cell lines to dissect signal transduction pathways. Proc. Natl Acad. Sci. USA. 97:2000;6499-6503.
28. Arbeitman M.N., Furlong E.E., Imam F., Johnson E., Null B.H., Baker B.S., et al. Gene expression during the life cycle of Drosophila melanogaster. Science. 297:2002;2270-2275.
29. Su T.T., O'Farrell P.H. Chromosome association of minichromosome maintenance proteins in Drosophila mitotic cycles. J. Cell Biol. 139:1997;13-21.
30. Su T.T., Parry D.H., Donahoe B., Chien C.T., O'Farrell P.H., Purdy A. Cell cycle roles for two 14-3-3 proteins during Drosophila development. J. Cell Sci. 114:2001;3445-3454.
31. Foe V.E. Mitotic domains reveal early commitment of cells in Drosophila embryos. Development. 107:1989;1-22.
32. Choi T., Cho N., Oh Y., Yoo M., Matsukage A., Ryu Y., et al. The DNA replication-related element (DRE)-DRE-binding factor (DREF) system may be involved in the expression of the Drosophila melanogaster TBP gene. FEBS Letters. 483:2000;71-77.
33. Sawado T., Yamaguchi M., Nishimoto Y., Ohno K., Sakaguchi K., Matsukage A. dE2F2, a novel E2F-family transcription factor in Drosophila melanogaster. Biochem. Biophys. Res. Commun. 251:1998;409-415.
34. Duronio R.J., O'Farrell P.H., Xie J.E., Brook A., Dyson N. The transcription factor E2F is required for S phase during Drosophila embryogenesis. Genes Dev. 9:1995;1445-1455.
35. Yamaguchi M., Hayashi Y., Hirose F., Nishimoto Y., Matsukage A. Distinct roles of E2F recognition sites as positive or negative elements in regulation of the DNA polymerase alpha 180 kDa catalytic subunit gene promoter during Drosophila development. Nucl. Acids Res. 25:1997;3847-3854.
36. Frolov M.V., Huen D.S., Stevaux O., Dimova D., Balczarek-Strang K., Elsdon M., Dyson N.J. Functional antagonism between E2F family members. Genes Dev. 15:2001;2146-2160.
37. Ma J., Katz E., Belote J.M. Expression of proteasome subunit isoforms during spermatogenesis in Drosophila melanogaster. Insect Mol. Biol. 11:2002;627-639.
38. Kurucz E., Ando I., Sumegi M., Holzl H., Kapelari B., Baumeister W., Udvardy A. Assembly of the Drosophila 26 S proteasome is accompanied by extensive subunit rearrangements. Biochem. J. 365:2002;527-536.
39. Klein U., Gernold M., Kloetzel P.M. Cell-specific accumulation of Drosophila proteasomes (MCP) during early development. J. Cell Biol. 111:1990;2275-2282.
40. Engstrom Y., Kadalayil L., Sun S.C., Samakovlis C., Hultmark D., Faye I. kappa B-like motifs regulate the induction of immune genes in Drosophila. J. Mol. Biol. 232:1993;327-333.
41. Parker C.S., Topol J. A Drosophila RNA polymerase II transcription factor binds to the regulatory site of an hsp 70 gene. Cell. 37:1984;273-283.
42. Stapleton M., Liao G., Brokstein P., Hong L., Carninci P., Shiraki T., et al. The Drosophila gene collection: identification of putative full-length cDNAs for 70% of D. melanogaster genes. Genome Res. 12:2002;1294-1300.