Comparison of molecular markers and coefficients of parentage for the analysis of genetic diversity among spring bread wheat accessions

Euphytica

Volumn 130, Issue 1, 2003, Pages 77-86

  Almanza Pinzon M I ^a   Khairallah, M ^b   Fox, P N ^b,c   Warburton, M L ^b  

^a INTERNATIONAL MAIZE AND WHEAT IMPROVEMENT CENTER CIMMYT   (Mexico)

^b CIMMYT   (United States)

^c Stoneville Pedigreed Seed Company   (United States)

Author keywords

Coefficient of parentage; Genetic diversity; Molecular markers; Wheat (Triticum aestivum L.)

Indexed keywords

EMBRYOPHYTA; TRITICUM AESTIVUM; ZEA MAYS;

EID: 0037282833     PISSN: 00142336     EISSN: None     Source Type: Journal    
DOI: 10.1023/A:1022310014075     Document Type: Article

References (35)

1. Barbosa-Neto, J.F., M.E. Sorrells & G. Cisar, 1996. Prediction of heterosis in wheat using coefficient of parentage and RFLP-based estimates of genetic relationship. Genome 39: 1142-1149.
2. Barrett, B.A., K.K. Kidwell & P.N. Fox, 1998. Comparison of AFLP and pedigree-based genetic diversity assessment methods using wheat cultivars from the Pacific Northwest. Crop Sci 38: 1271-1278.
3. Bohn, M., H.F. Utz & A.E. Melchinger, 1999. Genetic similarities among winter wheat cultivars determined on the basis of RFLPs, AFLPs, and SSRs and their use for predicting progeny variance. Crop Sci 39: 228-237.
4. Brennan, J.P. & P.N. Fox, 1998. Impact of CIMMYT varieties on the genetic diversity of wheat in Australia, 1973-1993. Aust J Agric Res 49: 175-178.
5. Burkhamer, R.L., S.P. Lanning, R.J. Martens, J.M. Martin & L.E. Talbert, 1998. Predicting progeny variance from parental divergence in hard red spring wheat. Crop Sci 38: 243-248.
6. Chen, H.B., J.M. Martin, M. Lavin & L.E. Talbert, 1994. Genetic diversity in hard red spring wheat based on sequence-tagged-site PCR markers. Crop Sci 34: 1628-1632.
7. CIMMYT, 2001. The Applied Biotechnology Center's Manual of Laboratory Protocols. First Edition. Mexico D.F., CIMMYT.
8. Devos, K.M., G.J. Bryan, A.J. Collins, P. Stephenson & M.D. Gale, 1995. Application of two microsatellite sequences in wheat storage proteins as molecular markers. Theor Appl Genet 90: 247-252.
9. Fabrizius, M.A., R.H. Busch, K. Khan & L. Huckle, 1998. Genetic diversity and heterosis of spring wheat crosses. Crop Sci 38: 1108-1112.
10. Fox, P.N., R.I. Magaña, C. López, H. Sánchez, R. Herrera, V. Vicarte, J.W. White, B. Skovmand & M.C. Mackay, 1997. International Wheat Information System (IWIS). Version 2. México, D.F. CIMMYT. On compact disk.
11. Hancock, J.F., 1992. Plant Evolution and the Origin of Crop Species. Englewood Cliffs, New Jersey, Prentice-Hall.
12. Jones, B.L., G.L. Lookhart, S.B. Hall & K.F. Finney, 1982. Identification of wheat cultivars by gliadin electrophoresis: electropherograms of the 88 wheat cultivars most commonly grown in the United States in 1979. Cereal Chem 59: 181-188.
13. Kim, H.S. & R.W. Ward, 1997. Genetic diversity in Eastern U.S. soft winter wheat (Triticum aestivum L. em. Thell.) based on RFLPs and coefficient of parentage. Theor Appl Genet 94: 472-479.
14. Lee, M., 1995. DNA markers and plant breeding programs. Adv Agron 55: 265-344.
15. Martin, J.M., L.E. Talbert, S.P. Lanning & N.K. Blake, 1995. Hybrid performance in wheat as related to parental diversity. Crop Sci 35: 104-108.
16. Mitchell, S.E., S. Kresovich, C.A. Jester, C.J. Hernández & A.K. Szewc-McFadden, 1997. Application of multiplex PCR and fluorescence-based, semi-automated allele sizing technology for genotyping plant genetic resources. Crop Sci 37: 617-624.
17. Pejic, I., P. Ajmone-Marsan, M. Morgante, V. Kozumplick, P. Castiglioni, G. Taramino & M. Motto, 1998. Comparative analysis of genetic similarity among maize inbred lines detected by RFLPs, RAPDs, SSRs, and AFLPs. Theor Appl Genet 97: 1248-1255.
18. Plaschke, J., M.W. Ganal & M.S. Röder, 1995. Detection of genetic diversity in closely related bread wheat using microsatellite markers. Theor Appl Genet 91: 1001-1007.
19. Powell, W., M. Morgante, C. Andre, M. Hanafey, J. Vogel, S. Tingey & A. Rafalsky, 1996. The comparison of RFLP, RAPD, AFLP y SSRs (microsatellite) markers for germplasm analysis. Mol Breed 2: 225-238.
20. Röder, M.S., V. Korzun, K. Wendehake, J. Plaschke, M. Tixier, P. Leroy & M. Ganal, 1998. A microsatellite map of wheat. Genetics 149: 2007-2023.
21. Rohlf, F.J., 1997. NTSYSpc Numerical Taxonomy and Multivariate Analysis System, version 2.00. Department of Ecology and Evolution. State University of New York.
22. Rojas, G., J. Norgaard & R. Herrera, 1994. Coefficient of parentage. Users Manual. México, D.F. CIMMYT.
23. Russell, J.R., J.D. Fuller, M. Macaulay, B.G. Hatz, A. Jahoor, W. Powell & R. Waugh, 1997. Direct comparison of levels of genetic variation among barley accessions detected by RFLPs, AFLPs, SSRs and RAPDs. Theor Appl Genet 95: 714-722.
24. Saghai-Maroof, M.A., K. Soliman, R.A. Jörgensen & R.W. Allard, 1984. Ribosomal DNA sparcer-length polymorphisms in barley: mendelian inheritance, chromosomal location, and population dynamics. PNAS 81: 8014-8018.
25. Sharma, H.C. & B.S. Gill, 1983. Current status of wide hybridization in wheat. Euphytica 32: 17-31.
26. Siedler, H., M.M. Messmer, G.M. Schachermayr, H. Winzeler, M. Winzeler & B. Keller, 1994. Genetic diversity in European wheat and spelt breeding material based on RFLP data. Theor Appl Genet 88: 994-1003.
27. Souza, E., P.N. Fox, D. Byerlee & B. Skovmand, 1994. Spring wheat diversity in irrigated areas of two developing countries. Crop Sci 34: 774-783.
28. Souza, E., P.N. Fox & B. Skovmand, 1998. Parentage analysis of International Spring Wheat Yield Nurseries 17 to 27. Crop Sci 38: 337-341.
29. St. Martin, S.K. 1982. Effective population size for the soybean improvement program in maturity groups 00 to 0V. Crop Sci 22: 151-152.
30. van Beuningen, L.T. & R.H. Busch, 1997a. Genetic diversity among North American spring wheat cultivars: I. Analysis of the coefficient of parentage matrix. Crop Sci 37: 570-579.
31. van Beuningen, L.T. & R.H. Busch, 1997b. Genetic diversity among North American spring wheat cultivars: II. Ancestor contributions to gene pools of different eras and regions. Crop Sci 37: 580-585.
32. van Beuningen, L.T. & R.H. Busch, 1997c. Genetic diversity among North American spring wheat cultivars: III. Cluster analysis based on quantitative morphological traits. Crop Sci 37: 981-988.
33. Vos, P., R. Hogers, M. Bleeker, M. Reijans, T. van de Lee, M. Hornes, A. Frijters, J. Pot, J. Peleman, M. Kuiper & M. Zabeau, 1995. AFLP: a new technique for DNA fingerprinting. Nuc Acids Res 23: 4407-4414.
34. Zeven, A.C. & R. Schachl, 1989. Groups of bread wheat landraces in the Austrian Alps. Euphytica 41: 235-246.
35. Ziegle, J.S., Y. Su, K.P. Corcoran, L. Nie, P.E. Mayrand, L.B. Hoff, L.J. McBride, M.N. Kronick & S.R. Diehl, 1992. Application of automated DNA sizing technology for genotyping microsatellite loci. Genomics 14: 1026-1031.