Modulation of splicing events in histone deacetylase 3 by various extracellular and signal transduction pathways

Gene Expression

Volumn 11, Issue 1, 2003, Pages 13-21

  Gray, S G ^a,c   Iglesias, A H ^b   Teh, B T ^a   Dangond, F ^b  

^a VAN ANDEL RESEARCH INSTITUTE   (United States)

^b BRIGHAM AND WOMEN S HOSPITAL   (United States)

^c HAGEDORN RESEARCH INSTITUTE   (Denmark)

Author keywords

Alternative splicing; Histone deacetylase; Signaling

Indexed keywords

FUNGAL PROTEIN; HISTONE DEACETYLASE; HISTONE DEACETYLASE 1; HISTONE DEACETYLASE 2; HISTONE DEACETYLASE 3; HISTONE DEACETYLASE 8; HISTONE DEACETYLASE INHIBITOR; ISOENZYME; MESSENGER RNA; UNCLASSIFIED DRUG;

ALTERNATIVE RNA SPLICING; AMINO TERMINAL SEQUENCE; ARTICLE; CHROMATIN; CONTROLLED STUDY; ENZYME ANALYSIS; ENZYME INHIBITION; HUMAN; HUMAN CELL; HUMAN TISSUE; KIDNEY CARCINOMA; MOUSE; NONHUMAN; OSMOTIC STRESS; SEQUENCE HOMOLOGY; SIGNAL TRANSDUCTION; TRANSCRIPTION REGULATION;

MURINAE;

EID: 0037239011     PISSN: 10522166     EISSN: None     Source Type: Journal    
DOI: 10.3727/000000003783992342     Document Type: Article

References (33)

1. Caballero, O. L.; de Souza, S. J.; Brentani, R. R.; Simpson, A. J. Alternative spliced transcripts as cancer markers. Dis. Markers 17:67-75; 2001.
2. Chomczynski, P.; Sacchi, N. Single-step method of RNA isolation by acid guanidinium thiocyanate-phenol-chloroform extraction. Anal. Biochem. 162:156-159; 1987.
3. Dangond, F.; Foerznler, D.; Weremowicz, S.; Morton, C. C.; Beier, D. R.; Gullans, S. R. Cloning and expression of a murine histone deacetylase 3 (mHdac3) cDNA and mapping to a region of conserved synteny between murine chromosome 18 and human chromosome 5. Mol. Cell. Biol. Res. Commun. 2:91-96; 1999.
4. Dangond, F.; Gullans, S. R. Differential expression of human histone deacetylase mRNAs in response to immune cell apoptosis induction by trichostatin A and butyrate. Biochem. Biophys. Res. Commun. 247:833-837; 1998.
5. Dangond, F.; Hafler, D. A.; Tong, J. K.; Randall, J.; Kojima, R.; Utku, N.; Gullans, S. R. Differential display cloning of a novel human histone deacetylase (HDAC3) cDNA from PHA-activated immune cells. Biochem. Biophys. Res. Comm. 242:648-652; 1998.
6. Dangond, F.; Henriksson, M.; Zardo, G.; Caiafa, P.; Ekström, T. J.; Gray, S. G. Differential expression of class I HDACs: Roles of cell density and cell cycle. Int. J. Oncol. 19:773-777; 2001.
7. de Nigris, F.; Cerutti, J.; Morelli, C.; Califano, D.; Chiariotti, L.; Viglietto, G.; Santelli, G.; Fusco, A. Isolation of a Sir-like gene, SIR-T8, that is overexpressed in thyroid carcinoma cell lines and tissues. Br. J. Cancer 86:917-923; 2002.
8. Emiliani, S.; Fischle, W.; Van Lint, C.; Al-Abed, Y.; Verdin, E. Characterization of a human RPD3 ortholog, HDAC3. Proc. Natl Acad. Sci. USA 95:2795-2800; 1998.
9. Ewing, B.; Green, P. Analysis of expressed sequence tags indicates 35,000 human genes. Nat. Genet. 25:232-234; 2000.
10. Fischer, D. D.; Cai, R.; Bhatia, U.; M., A. F. A.; Song, C.; Terry, R.; Trogani, N.; Widmer, R.; Atadja, P.; Cohen, D. Isolation and characterization of a novel class II histone deacetylase, HDAC10. J. Biol. Chem. 277:6656-6666; 2002.
11. Gao, L.; Cueto, M. A.; Asselbergs, F.; Atadja, P. Cloning and functional characterization of HDAC11, a novel member of the human histone deacetylase family. J. Biol. Chem. 277:25748-25755; 2002.
12. Garmyn, M.; Mammone, T.; Pupe, A.; Gan, D.; Declercq, L.; Maes, D. Human keratinocytes respond to osmotic stress by p38 map kinase regulated induction of HSP70 and HSP27. J. Invest. Dermatol. 117:1290-1295; 2001.
13. Goldstrohm, A. C.; Greenleaf, A. L.; Garcia-Blanco, M. A. Co-transcriptional splicing of pre-messenger RNAs: Considerations for the mechanism of alternative splicing. Gene 277:31-47; 2001.
14. Graveley, B. R. Alternative splicing: Increasing diversity in the proteomic world. Trends Genet. 17:100-107; 2001.
15. Gray, S. G.; Ekström, T. J. Effects of cell density and trichostatin A on the expression of HDAC1 and p57Kip2 in Hep3B cells. Biochem. Biophys. Res. Commun. 245:423-427; 1998.
16. Gray, S. G.; Ekström, T. J. The human histone deacetylase family. Exp. Cell Res. 262:75-83; 2001.
17. Gray, S. G.; Hartmann, W.; Eriksson, T.; Ekström, C.; Holm, S.; Kytola, S.; von Schweinitz, D.; Pietsch, T.; Larsson, C.; Kogner, P.; Sandstedt, B.; Ekström, T. J. Expression of genes involved with cell cycle control, cell growth and chromatin modification are altered in hepatoblastomas. Int. J. Mol. Med. 6:161-169; 2000.
18. Gray, S. G.; Kjellman, M.; Larsson, C.; Ekström, T. J. Novel splicing of an IGF2 polymorphic region in human adrenocortical carcinomas. Biochem. Biophys. Res. Commun. 239:878-883; 1997.
19. Gray, S. G.; Svechnikova, I.; Hartmann, W.; O'Connor, L.; Aguilar-Santelises, M.; Ekström, T. J. IGF-II and IL-2 act synergistically to alter HDAC1 expression following treatments with trichostatin A. Cytokine 12:1104-1109; 2000.
20. Gray, S. G.; Teh, B. T. Histone acetylation/deacetylation and cancer: An "open" and '"shut" case? Curr. Mol. Med. 1:401-429; 2001.
21. Waf1,Cip1,Sdi1 expression in Hep3B cells. Exp. Cell Res. 253:618-628; 1999.
22. Guardiola, A. R.; Yao, T.-P. Molecular cloning and characterization of a novel histone deacetylase HDAC10. J. Biol. Chem. 277:3350-3356; 2002.
23. Jenuwein, T.; Allis, C. D. Translating the histone code. Science 293:1074-1080; 2001.
24. Johnson, C. A.; White, D. A.; Lavender, J. S.; O'Neill, L. P.; Turner, B. M. Human class I histone deacetylase complexes show enhanced catalytic activity in the presence of ATP and co-immunoprecipitate with the ATP-dependent chaperone protein Hsp70. J. Biol. Chem. 277:9590-9597; 2002.
25. Mahlknecht, U.; Emiliani, S.; Najfeld, V.; Young, S.; Verdin, E. Genomic organization and chromosomal localization of the human histone deacetylase 3 gene. Genomics 56:197-202; 1999.
26. Mahlknecht, U.; Hoelzer, D.; Bucala, R.; Verdin, E. Cloning and characterization of the murine histone deacetylase (HDAC3). Biochem. Biophys. Res. Commun. 263:482-490; 1999.
27. Mahlknecht, U.; Schnittger, S.; Ottmann, O. G.; Schoch, C.; Mosebach, M.; Hiddemann, W.; Hoelzer, D. Chromosomal organization and localization of the human histone deacetylase 5 gene (HDAC5). Biochim. Biophys. Acta 1493:342-348; 2000.
28. Richmon, J. D.; Fukuda, K.; Sharp, F. R.; Noble, L. J. Induction of HSP-70 after hyperosmotic opening of the blood-brain barrier in the rat. Neurosci. Lett. 202:1-4; 1995.
29. Strahl, B. D.; Allis, C. D. The language of covalent histone modifications. Nature 403:41-45; 2000.
30. Tong, J. J.; Liu, J.; Bertos, N. R.; Yang, X.-J. Identification of HDAC10, a novel class II human histone deacetylase containing a leucine-rich domain. Nucleic Acids Res. 30:1114-1123; 2002.
31. Verdel, A.; Khochbin, S. Identification of a new family of higher eukaryotic histone deacetylases. Coordinate expression of differentiation-dependent chromatin modifiers. J. Biol. Chem. 274:2440-2445; 1999.
32. Yang, W. M.; Yao, Y. L.; Sun, J. M.; Davie, J. R.; Seto, E. Isolation and characterization of cDNAs corresponding to an additional member of the human histone deacetylase gene family. J. Biol. Chem. 272:28001-28007; 1997.
33. Zhou, X.; Marks, P. A.; Rifkind, R. A.; Richon, V. M. Cloning and characterization of a histone deacetylase, HDAC9. Proc. Natl. Acad. Sci. USA 98:10572-10577; 2001.