Spectroscopic characterization of nonnative conformational states of cytochrome c

Journal of Physical Chemistry B

Volumn 106, Issue 25, 2002, Pages 6566-6580

  Oellerich, Silke ^a,b   Wackerbarth, Hainer ^a,c   Hildebrandt, Peter ^a,d  

^a MAX PLANCK INSTITUTE FOR CHEMICAL ENERGY CONVERSION   (Germany)

^b LEIDEN UNIVERSITY   (Netherlands)

^c TECHNICAL UNIVERSITY OF DENMARK   (Denmark)

^d INSTITUTO DE TECNOLOGIA QUÍMICA E BIOLÓGICA   (Portugal)

Author keywords

[No Author keywords available]

Indexed keywords

CIRCULAR DICHROISM (CD);

COMPLEXATION; ELECTRODES; ELECTROSTATICS; HIGH TEMPERATURE OPERATIONS; HYDROPHOBICITY; IONIC STRENGTH; PARAMAGNETIC RESONANCE; PH; PROTEINS; SPECTROSCOPIC ANALYSIS; SPECTRUM ANALYSIS;

ORGANIC COMPOUNDS;

EID: 0037183064     PISSN: 10895647     EISSN: None     Source Type: Journal    
DOI: 10.1021/jp013841g     Document Type: Article

References (74)

1. Lanyi, J.K. J. Biol. Chem. 1997, 272, 31209.
2. Fink, A.L. Annu. Rev. Biophys. Biomol. Struct. 1995, 24, 495.
3. Elöve, G.A.; Bhuyan, A.K.; Roder, H. Biochemistry 1994, 33, 6925.
4. Yeh, S.R.; Takahashi, S.; Fan, B.C.; Rousseau, D.L. Nat. Struct. Biol. 1997, 4, 51.
5. Englander, S.W.; Sosnick, T.R.; Mayne, L.C.; Shtilerman, M.; Qi, P.X.; Bai, Y.W. Acc. Chem. Res. 1998, 31, 737.
6. Yeh, S.R.; Han, S.W.; Rousseau, D.L. Acc. Chem. Res. 1998, 31, 727.
7. Pettigrew, G.W.; Moore, G.R. Cytochromes c - biological aspects; Springer-Verlag: Berlin, Heidelberg, 1987.
8. Scott, R.A.; Mauk, A.G. Cytochrome c - a multidisciplinary approach, University Science Books: Sausalito, CA, 1996.
9. Hildebrandt, P.; Vanhecke, F.; Buse, G.; Soulimane, T.; Mauk, A.G. Biochemistry 1993, 32, 10912.
10. Hildebrandt, P.; Heimburg, T.; Marsh, D.; Powell, G.L. Biochemistry 1990, 29, 1661.
11. Döpner, S.; Hildebrandt, P.; Resell, F.I.; Mauk, A.G.; von Walter, M.; Buse, G.; Soulimane, T. Eur. J. Biochem. 1999, 261, 379.
12. Weber, C.; Michel, B.; Bosshard, H.R. Proc. Natl. Acad. Sci. U.S.A. 1987, 84, 6687.
13. Hildebrandt, P.; Stockburger, M. Biochemistry 1989, 28, 6722.
14. Heimburg, T.; Hildebrandt, P.; Marsh, D. Biochemistry 1991, 30, 9084.
15. Wackerbarth, H.; Klar, U.; Gunther, W.; Hildebrandt, P. Appl. Spectrosc. 1999, 53, 283.
16. Hildebrandt, P. Biochim. Biophys. Acta 1990, 1040, 175.
17. Döpner, S.; Hildebrandt, P.; Resell, F.I.; Mauk, A.G. J. Am. Chem. Soc. 1998, 120, 11246.
18. Hildebrandt, P.; Stockburger, M. Biochemistry 1989, 28, 6710.
19. Cai, J.Y.; Yang, J.; Jones, D.P. Biochim. Biophys. Acta 1998, 1366, 139.
20. Green, D.R. Cell 1998, 94, 695.
21. Hengartner, M.O. Nature 2000, 407, 770.
22. Jemmerson, R.; Liu, J.; Hausauer, D.; Lam, K.P.; Mondino, A.; Nelson, R.D. Biochemistry 1999, 38, 3599.
23. Tanford, C. The hydrophobic effect: Formation of micelles and biological membranes; John Wiley & Sons: New York, 1980.
24. Vincent, J.S.; Levin, I.W. Biochemistry 1988, 27, 3438.
25. Rytömaa, M.; Kinnunen, P.K.J. J. Biol. Chem. 1995, 270, 3197.
26. Salamon, Z.; Tollin, G. Biophys. J. 1996, 71, 848.
27. Yeh, S.R.; Rousseau, D.L. Nat. Struct. Biol. 1998, 5, 222.
28. Jordan, T.; Eads, J.C.; Spire, T.G. Protein Sci. 1995, 4, 716.
29. Wackerbarth, H. Ph.D. Thesis, MPI f. Strahlenchemie Mülheim/ University of Essen, Germany, 2000.
30. Döpner, S.; Hildebrandt, P.; Mauk, A.G.; Lenk, H.; Stempfle, W. Spectrochim. Acta 1996, A52, 573.
31. Makinen, M.W.; Churg, A.K. In Iron Porphyrins; Lever, A.B.P., Gray, H.B., Eds.; Physical Bioinorganic Chemistry Series, 1, 2, 4; Addison-Wesley Publishing Company: Reading, MA, 1983; Chapter 3, p 141.
32. Yoshimura, T. Arch. Biochem. Biophys. 1988, 264, 450.
33. Myer, Y.P.; Saturno, A.F.; Verma, B.C.; Pande, A. J. Biol. Chem. 1979, 254, 11202.
34. Parthasarathi, N.; Hansen, C.; Yamaguchi, S.; Spire, T.G. J. Am. Chem. Soc. 1987, 109, 3865.
35. Das, T.K.; Mazumdar, S.; Mitra, S. Eur. J. Biochem. 1998, 254, 662.
36. Ångström, J.; Moore, G.R.; Williams, R.J.P. Biochim. Biophys. Acta 1982, 703, 87.
37. Oellerich, S. Ph.D. Thesis, MPI f. Strahlenchemie Mülheim/ University of Essen, Germany, 2001.
38. Alden, R.G.; Crawford, B.A.; Doolen, R.; Ondrias, M.R.; Shelnutt, J.A. J. Am. Chem. Soc. 1989, 111, 2070.
39. Smith, W.E. Methods Enzymol. 1993, 482.
40. Kitagawa, T.; Ozaki, Y. Struct. Bonding 1987, 64, 73.
41. Colòn, W.; Wakem, L.P.; Sherman, F.; Roder, H. Biochemistry 1997, 36, 12535.
42. Takahashi, S.; Yeh, S.R.; Das, T.K.; Chan, C.K.; Gottfried, D.S.; Rousseau, D.L. Nat. Struct. Biol. 1997, 4, 44.
43. Wang, J.-S.; Van Wart, H.E. J. Phys. Chem. 1989, 93, 7925.
44. Boffi, A.; Das, T.K.; Della Longa, S.; Spagnuolo, C.; Rousseau, D.L. Biophys. J. 1999, 77, 1143.
45. Yeh, S.R.; Rousseau, D.L. J. Biol. Chem. 1999, 274, 17853.
46. Gadsby, P.M.A.; Thomson, A.J. J. Am. Chem. Soc. 1990, 112, 5003.
47. Santucci, R.; Fiorucci, L.; Sinibaldi, F.; Polizio, F.; Desideri, A.; Ascoli, F. Arch. Biochem. Biophys. 2000, 379, 331.
48. Smulevich, G.; Neri, F.; Marzocchi, M.P.; Welinder, K.G. Biochemistry 1996, 35, 10576.
49. Bushnell, G.W.; Louie, G.V.; Brayer, G.D. J. Mol. Biol. 1990, 214, 585.
50. Goto, Y.; Calciano, L.J.; Fink, A.L. Proc. Natl. Acad. Sci. U.S.A. 1990, 87, 573.
51. Santucci, R.; Bongiovanni, C.; Mei, G.; Ferri, T.; Polizio, F.; Desideri, A. Biochemistry 2000, 39, 12632.
52. Jeng, M.F.; Englander, S.W.; Elöve, G.A.; Wand, A.J.; Roder, H. Biochemistry 1990, 29, 10433.
53. Dyson, H.J.; Beattie, J.K. J. Biol. Chem. 1982, 257, 2267.
54. Myer, Y.P.; Saturno, A.F. J. Prot. Chem. 1991, 10, 481.
55. Indiani, C.; de Sanctis, G.; Neri, F.; Santos, H.; Smulevich, G.; Coletta, M. Biochemistry 2000, 39, 8234.
56. Most likely, the transition from U[6cHS(1)] to A[6cLS] is linked with temperature-dependent structural changes of the protein environment and does not represent a pure spin transition.
57. Taler, G.; Schejter, A.; Navon, G.; Vig, I.; Margoliash, E. Biochemistry 1995, 34, 14209.
58. Filosa, A.; English, A.M. J. Biol. Inorg. Chem. 2000, 5, 448.
59. Hildebrandt, P.; Pielak, G.J.; Williams, R.J.P. Eur. J. Biochem. 1991, 201, 211.
60. Thomas, Y.G.; Goldbeck, R.A.; Kliger, D.S. Biopolymers 2000, 57, 29.
61. Myer, Y.P. Biochemistry 1968, 7, 765.
62. Fink, A.L.; Calciano, L.J.; Goto, Y.; Palleros, D.R. Curr. Res. Protein Chem. 1990, 417.
63. Muga, A.; Mantsch, H.H.; Surewicz, W.K. Biochemistry 1991, 30, 7219.
64. Heimburg, T.; Marsh, D. Biophys. J. 1993, 65, 2408.
65. Davies, A.M.; Guillemette, J.G.; Smith, M.; Greenwood, C.; Thurgood, A.G.P.; Mauk, A.G.; Moore, G.R. Biochemistry 1993, 32, 5431.
66. Pinheiro, T.J.T.; Elöve, G.A.; Watts, A.; Roder, H. Biochemistry 1997, 36, 13122.
67. Goto, Y.; Takahashi, N.; Fink, A.L. Biochemistry 1990, 29, 3480.
68. Hamada, D.; Kuroda, Y.; Kataoka, M.; Aimoto, S.; Yoshimura, T.; Goto, Y. J. Mol. Biol. 1996, 256, 172.
69. Marmorino, J.L.; Pielak, G.J. Biochemistry 1995, 34, 3140.
70. Yuan, X.L.; Hawkridge, F.M.; Chlebowski, J.F. J. Electroanal. Chem. 1993, 350, 29.
71. Murgida, D.H.; Hildebrandt, P. J. Phys. Chem. B 2001, 105, 1578.
72. Valette, G.; Hamelin, A. J. Electroanal. Chem. 1973, 45, 301.
73. Shlepakov, A.V.; Sevastyanov, E.S. Sov. Electrochem. 1978, 14, 243.
74. Wackerbarth, H.; Murgida, D.H.; Oellerich, S.; Döpner, S.; Rivas, L.; Hildebrandt, P. J. Mol. Struct. 2001, 563, 51.