Structural basis for sensory rhodopsin function

Biochimica et Biophysica Acta - Biomembranes

Volumn 1565, Issue 2, 2002, Pages 196-205

  Pebay Peyroula, Eva ^a   Royant, Antoine ^a,b   Landau, Ehud M ^c   Navarro, Javier ^c  

^a INSTITUT DE BIOLOGIE STRUCTURALE   (France)

^b EUROPEAN SYNCHROTRON RADIATION FACILITY   (France)

^c Membrane Protein Laboratory   (United States)

Author keywords

Color tuning; Crystallography; Sensory rhodopsin; Signal transduction; Structural mechanism

Indexed keywords

APOPROTEIN; OPSIN; PROTEIN; PROTEIN HTRII; RETINAL; RHODOPSIN; UNCLASSIFIED DRUG;

BINDING SITE; CALCULATION; CHROMATOPHORE; CRYSTAL STRUCTURE; CRYSTALLOGRAPHY; ISOMERISM; MOLECULAR MECHANICS; MUTAGENESIS; NATRONOBACTERIUM PHARAONIS; NONHUMAN; PHOTORECEPTOR; PREDICTION; PRIORITY JOURNAL; PROTEIN FUNCTION; PROTEIN INTERACTION; PROTEIN STRUCTURE; REVIEW; SENSORY RECEPTOR; SIGNAL TRANSDUCTION; SPECTROSCOPY;

AMINO ACID SEQUENCE; ARCHAEAL PROTEINS; BINDING SITES; CAROTENOIDS; CRYSTALLOGRAPHY; CYTOPLASM; HALORHODOPSINS; MEMBRANE PROTEINS; MODELS, MOLECULAR; MOLECULAR SEQUENCE DATA; NATRONOBACTERIUM; RETINALDEHYDE; SENSORY RHODOPSINS; SIGNAL TRANSDUCTION; SPECTROPHOTOMETRY; STRUCTURE-ACTIVITY RELATIONSHIP;

NATRONOBACTERIUM; NATRONOMONAS PHARAONIS;

EID: 0037064214     PISSN: 00052736     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0005-2736(02)00569-2     Document Type: Review

References (36)

1. Spudich J.L., Yang C.S., Jung K.H., Spudich E.N. Annu. Rev. Cell Dev. Biol. 16:2000;365-392.
2. Shimono K., Iwamoto M., Sumi M., Kamo N. FEBS Lett. 420:1997;54-56.
3. Hohenfeld I.P., Wegener A.A., Engelhard M. FEBS Lett. 442:1999;198-202.
4. Hirayama J., Imamoto Y., Shichida Y., Kamo N., Tomioka H., Yoshizawa T. Biochemistry. 31:1992;2093-2098.
5. Chizhov I., Schmies G., Seidel R., Sydor J.R., Luttenberg B., Engelhard M. Biophys. J. 75:1998;999-1009.
6. Yan B., Takahashi T., Johnson R., Spudich J.L. Biochemistry. 30:1991;10686-10692.
7. Losi A., Wegener A.A., Engelhard M., Gartner W., Braslavsky S.E. Biophys. J. 78:2000;2581-2589.
8. Hirayma J., Kamo N., Imamoto Y., Shichida Y., Yoshizawa T. FEBS Lett. 364:1995;168-170.
9. Schmies G., Luttenberg B., Chizhov I., Engelhard M., Becker A., Bamberg E. Biophys. J. 78:2000;967-976.
10. Sudo Y., Iwamoto M., Shimono K., Sumi M., Kamo N. Biophys. J. 80:2001;916-922.
11. Spudich E.N., Zhang W., Alam M., Spudich J.L. Proc. Natl. Acad. Sci. U. S. A. 94:1997;4960-4965.
12. Wegener A.A., Chizhov I., Engelhard M., Steinhoff H.J. J. Mol. Biol. 301:2000;881-891.
13. Royant A., Nollert P., Edman K., Neutze R., Landau E.M., Pebay-Peyroula E., Navarro J. Proc. Natl. Acad. Sci. U. S. A. 98:2001;10131-10136.
14. Kunji E.R., Spudich E.N., Grisshammer R., Henderson R., Spudich J.L. J. Mol. Biol. 308:2001;279-293.
15. Luecke H., Schobert B., Lanyi J.K., Spudich E.N., Spudich J.L. Science. 293:2001;1499-1503.
16. Landau E.M., Rosenbusch J.P. Proc. Natl. Acad. Sci. U. S. A. 93:1996;14532-14535.
17. Kolbe M., Besir H., Essen L.O., Oesterhelt D. Science. 288:2000;1390-1396.
18. Shimono K., Iwamoto M., Sumi M., Kamo N. Photochem. Photobiol. 72:2000;141-145.
19. Shimono K., Ikeura Y., Sudo Y., Iwamoto M., Kamo N. Biochim. Biophys. Acta. 1515:2001;92-100.
20. Sasaki J., Spudich J.L. Biochim. Biophys. Acta. 1460:2000;230-239.
21. Kandori H., Furutani Y., Shimono K., Shichida Y., Kamo N. Biochemistry. 40:2001;15693-15698.
22. Hirayama J., Imamoto Y., Shichida Y., Yoshizawa T., Asato A.E., Liu R.S., Kamo N. Photochem. Photobiol. 60:1994;388-393.
23. Koyama Y., Kubo K., Komori M., Yasuda H., Mukai Y. Photochem. Photobiol. 54:1991;433-443.
24. Steinhoff H.J., Mollaaghababa R., Altenbach C., Hideg K., Krebs M., Khorana H.G., Hubbell W.L. Science. 266:1994;105-107.
25. Farrens D.L., Altenbach C., Yang K., Hubbell W.L., Khorana H.G. Science. 274:1996;768-770.
26. Iwamoto M., Sudo Y., Shimono K., Kamo N. Biochim. Biophys. Acta. 1514:2001;152-158.
27. Zhang X.N., Zhu J., Spudich J.L. Proc. Natl. Acad. Sci. U. S. A. 96:1999;857-862.
28. Wegener A.A., Klare J.P., Engelhard M., Steinhoff H.J. EMBO J. 20:2001;5312-5319.
29. Seidel R., Scharf B., Gautel M., Kleine K., Oesterhelt D., Engelhard M. Proc. Natl. Acad. Sci. U. S. A. 92:1995;3036-3040.
30. Sudo Y., Iwamoto M., Shimono K., Kamo N. Biochim. Biophys. Acta. 1558:2002;63-69.
31. Luecke H. Biochim. Biophys. Acta. 1460:2000;133-156.
32. Kandori H., Shimono K., Sudo Y., Iwamoto M., Shichida Y., Kamo N. Biochemistry. 40:2001;9238-9246.
33. Ren L., Martin C.H., Wise K.J., Gillespie N.B., Luecke H., Lanyi J.K., Spudich J.L., Birge R.R. Biochemistry. 40:2001;13906-13914.
34. Edman K., Nollert P., Royant A., Belrhali H., Pebay-Peyroula E., Hajdu J., Neutze R., Landau E.M. Nature. 401:1999;822-826.
35. Hayashi S., Tajkhorshid E., Pebay-Peyrula E., Royant A., Landau E.M., Navarro J., Shulten K. J. Phys. Chem. 105:2001;10124-10131.
36. W.L. DeLano, The PyMOL Molecular Graphics System, DeLano Scientific, San Carlos, CA, USA, 2002. http://www.pymol.org