SCOPUS 정보 검색 플랫폼

Proceedings of the National Academy of Sciences of the United States of America

Volumn 99, Issue 18, 2002, Pages 11772-11777

Identification of the binding sites of regulatory proteins in bacterial genomes

(4) Li, Hao a Rhodius, Virgil b Gross, Carol b Siggia, Eric D c

a UNIVERSITY OF CALIFORNIA (United States)

b UNIVERSITY OF CALIFORNIA (United States)

c ROCKEFELLER UNIVERSITY (United States)

Author keywords

Algorithm; DNA binding site; E. coli; Position weight matrix; Transcription factor

Indexed keywords

DNA BINDING PROTEIN; OLIGONUCLEOTIDE; REGULATOR PROTEIN; TRANSCRIPTION FACTOR;

ALGORITHM; ARTICLE; BACTERIAL GENOME; BINDING SITE; ESCHERICHIA COLI; GENETIC REGULATION; MOLECULAR RECOGNITION; NUCLEOTIDE SEQUENCE; POSITION EFFECT; PRIORITY JOURNAL; PROTEIN DNA BINDING; TRANSCRIPTION REGULATION;

ALGORITHMS; BACTERIAL PROTEINS; BASE SEQUENCE; BINDING SITES; DNA, BACTERIAL; GENOME, BACTERIAL; TRANSCRIPTION FACTORS;

BACTERIA (MICROORGANISMS); ESCHERICHIA COLI; NEGIBACTERIA; PROKARYOTA;

EID: 0037015025 PISSN: 00278424 EISSN: None Source Type: Journal
DOI: 10.1073/pnas.112341999 Document Type: Article

Times cited : (75)

References (28)

1
- 0342588244
- (2000) Nucleic Acids Res. , vol.28 , pp. 56-59
- Perez-Rueda, E.¹ Collado-Vides, J.²

2
- 0032441150
- (1998) Proc. Natl. Acad. Sci. USA , vol.95 , pp. 14863-14868
- Eisen, M.B.¹ Spellman, P.T.² Brown, P.O.³ Botstein, D.⁴

3
- 0031787969
- (1998) Nat. Biotechnol. , vol.16 , pp. 939-945
- Roth, F.P.¹ Hughes, J.D.² Estep, P.W.³ Church, G.M.⁴

4
- 0035253676
- (2001) Nucleic Acids Res. , vol.29 , pp. 774-782
- McCue, L.¹ Thompson, W.² Carmack, C.³ Ryan, M.P.⁴ Liu, J.S.⁵ Derbyshire, V.⁶ Lawrence, C.E.⁷

5
- 0036180002
- (2002) Genome Res. , vol.12 , pp. 298-308
- Rajewsky, N.¹ Socci, N.D.² Zapotocky, M.³ Siggia, E.D.⁴

6
- 0033918228
- (2000) Genome Res. , vol.10 , pp. 744-757
- McGuire, A.M.¹ Hughes, J.D.² Church, G.M.³

7
- 0037188521
- (2002) Proc. Natl. Acad. Sci. USA , vol.99 , pp. 7323-7328
- Van Nimwegen, E.¹ Zavolan, M.² Rajewsky, N.³ Siggia, E.D.⁴

8
- 0032483307
- (1998) J. Mol. Biol. , vol.281 , pp. 827-842
- Van Helden, J.¹ Andre, B.² Collado-Vides, J.³

9
- 0034564539
- (2000) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.8 , pp. 344-354
- Sinha, S.¹ Tompa, M.²

10
- 0034708338
- (2000) J. Mol. Biol. , vol.297 , pp. 335-353
- Vanet, A.¹ Marsan, L.² Labigne, A.³ Sagot, M.F.⁴

11
- 0000133199
- (1989) Proc. Natl. Acad. Sci. USA , vol.86 , pp. 1183-1187
- Stormo, G.¹ Hartzell G.W. III²

12
- 0032826179
- (1999) Bioinformatics , vol.15 , pp. 563-577
- Hertz, G.¹ Stormo, G.²

13
- 0027912333
- (1993) Science , vol.262 , pp. 208-214
- Lawrence, C.E.¹ Altschul, S.F.² Boguski, M.S.³ Liu, J.S.⁴ Neuwald, A.F.⁵ Wootton, J.C.⁶

14
- 0029197507
- (1995) Proc. Int. Conf. Intell. Syst. Mol. Biol. , vol.3 , pp. 21-29
- Bailey, T.¹ Elkan, C.²

15
- 0034730161
- (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 10096-10100
- Bussemaker, H.J.¹ Li, H.² Siggia, E.D.³

16
- 0032573426
- (1998) J. Mol. Biol. , vol.284 , pp. 241-254
- Robison, K.¹ McGuire, A.M.² Church, G.M.³

17
- 0032459427
- (1998) Cold Spring Harbor Symp. Quant. Biol. , vol.63 , pp. 141-154
- Gross, C.A.¹ Chan, C.² Dombroski, A.³ Gruber, T.⁴ Sharp, M.⁵ Tupy, J.⁶ Young, B.⁷

18
- 0034731822
- (2000) Yeast , vol.16 , pp. 177-187
- Van Helden, J.¹ Andre, B.² Collado-Vides, J.³

19
- 0034656326
- (2000) Nucleic Acids Res. , vol.28 , pp. 1808-1818
- Van Helden, J.¹ Rios, A.² Collado-Vides, J.³

20
- 0032728081
- (1999) J. Comput. Biol. , vol.6 , pp. 281-297
- Ben-Dor, A.¹ Shamir, R.² Yakhini, Z.³

21
- 0023147228
- (1987) J. Mol. Biol. , vol.193 , pp. 723-750
- Berg, O.G.¹ Von Hippel, P.H.²

22
- 0035162782
- (2001) Nucleic Acids Res. , vol.29 , pp. 72-74
- Salgado, H.¹ Santos-Zavaleta, A.² Gama-Castro, S.³ Millan-Zarate, D.⁴ Diaz-Peredo, E.⁵ Sanchez-Solano, F.⁶ Perez-Rueda, E.⁷ Bonavides-Martinez, C.⁸ Collado-Vides, J.⁹

23
- 0034570532
- (2000) Microb. Comp. Genom. , vol.5 , pp. 205-222
- Serres, M.H.¹ Riley, M.H.²

24
- 15444350252
- (1997) Science , vol.277 , pp. 1453-1462
- Blattner, F.R.¹ Plunkett G. III² Bloch, C.A.³ Perna, N.T.⁴ Burland, V.⁵ Riley, M.⁶ Collado-Vides, J.⁷ Glasner, J.D.⁸ Rode, C.K.⁹ Mayhew, G.F.¹⁰

25
- 0000661051
- Neidhardt, F. C., Curtiss, R., III, Ingraham, J. L., Lin, E. C. C., Low, K. B., Magasanik, B., Reznikoff, W. S., Riley, M., Schaechter, M. & Umbarger, H. E. (Am. Soc. Microbiol., Washington, DC), 2nd Ed.
- (1996) Escherichia coli and Salmonella, Cellular and Molecular Biology , vol.2 , pp. 1232-1245
- Gralla, J.D.¹ Collado-Vides, J.²

26
- 0023664018
- (1987) Nucleic Acids Res. , vol.15 , pp. 1353-1361
- Cavener, D.¹

27
- 0035023305
- (2001) Genetics , vol.158 , pp. 41-64
- Courcelle, J.¹ Khodursky, A.² Peter, B.³ Brown, P.O.⁴ Hanawalt, P.C.⁵

28
- 0034687819
- (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 14674-14679
- Zimmer, D.P.¹ Soupene, E.² Lee, H.L.³ Wendisch, V.F.⁴ Khodursky, A.B.⁵ Peter, B.J.⁶ Bender, R.A.⁷ Kustu, S.⁸

* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.