DNA microarrays: A new diagnostic tool and its implications in colorectal cancer

International Journal of Colorectal Disease

Volumn 17, Issue 3, 2002, Pages 131-136

  Stremmel, Christian ^a   Wein, A ^a   Hohenberger, W ^a   Reingruber, B ^a  

^a UNIVERSITY OF ERLANGEN NUREMBERG   (Germany)

Author keywords

Colorectal cancer; DNA microarray; Prognostic markers; Tumors classification

Indexed keywords

DNA; METALLOPROTEINASE; RIBOSOME PROTEIN;

CANCER CELL; CANCER RISK; CELL DIFFERENTIATION; CELL FUNCTION; CELL GROWTH; CLUSTER ANALYSIS; COLORECTAL CANCER; CONTROLLED STUDY; DATA ANALYSIS; DIAGNOSTIC ACCURACY; DIAGNOSTIC TEST; DNA MICROARRAY; EARLY DIAGNOSIS; GENE EXPRESSION; GENE TECHNOLOGY; GENETIC ALGORITHM; GENETIC ANALYSIS; GENETIC TRANSCRIPTION; GROWTH REGULATION; HUMAN; HUMAN CELL; HUMAN TISSUE; PRIORITY JOURNAL; PROGNOSIS; REVIEW; RISK ASSESSMENT; TREATMENT PLANNING;

COLORECTAL NEOPLASMS; DNA, NEOPLASM; FEMALE; GENE EXPRESSION PROFILING; HUMANS; MALE; OLIGONUCLEOTIDE ARRAY SEQUENCE ANALYSIS; PROGNOSIS; SENSITIVITY AND SPECIFICITY; TUMOR MARKERS, BIOLOGICAL;

EID: 0036935128     PISSN: 01791958     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00384-001-0370-7     Document Type: Review

References (25)

1. Robert Koch Institut (2000) Datenanforderung. http://www.yellow-fever.rki.de
2. Bundesministerium für Gesundheit (1999) Gesundheitsbericht für Deutschland, Kapitel 5.9 Colon-/Rektumkarzinom 1998. http://www.bmgesundheit.de
3. Meltzer PS, Trent JM (1998) Chromosome rearrangements in human solid tumors. In: Vogelstein B, Kinzler KW (eds) The genetic basis of human cancer. McGraw-Hill, New York pp 143-162
4. Fearon E (1997) Human cancer syndromes: clues to the origin and nature of cancer. Science 278:1043-1050
5. Soares MB (1997) Identification and cloning of differentially expressed genes. Curr Opin Biotechnol 8:542-546
6. Schena M, Shaton D, Davis RW, Brown PO (1995) Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270:467-470
7. Eisen MB, Brown PO (1999) DNA arrays for analysis of gene expression. Methods Enzymol 303:179-205
8. Schena M, Shalon D, Heller R, Chai A, Brown PO, Davis RW (1996) Parallel human genomes analysis: micro-array based expression monitoring of 1000 genes. Proc Natl Acad Sci USA 93:10614-10619
9. Teague TK, Hildeman D, Kedl RM, Mitchell T, et al (1999) Activation changes the spectrum but not the diversity of genes expressed by T cells. Proc Natl Acad Sci USA 93:12691-12696
10. Hohenberger W, Schick C, Göhl J (1998) Mesorectal lymph node dissection: is it beneficial? Langenbecks Arch Surg 383:402-408
11. Hermanek P, Wichelt H, Staimmer D, Riedl S, the German Study Group (1995) Colo-Rectal Carcinoma (SGCRC): prognostic factors of rectum carcinoma - experience of the German multicentre study SGCRC. Tumori 81 [Suppl]:60-64
12. Köckerling F, Reymond MA, Altendorf-Hofmann A, Dworak O, Hohenberger W (1998) Influence of surgery on metachronous distant metastases and survival in rectal cancer. J Clin Oncol 16:324-329
13. UICC/Wittekind C, Wagner G (eds) (1997) TNM Classification of malignant tumours, 5th edn. Springer, Berlin Heidelberg New York
14. Diasio RB, Beaver TL, Carpenter JT (1988) Familial deficiency of dihydropyrimidine dehydrogenase. J Clin Invest 81:47-51
15. Johnston PG, Fisher ER, Rockette HE, Fisher B, Wolmark N, Drake JC, Chabner BA, Allegra CJ (1994) The role of thymidylate synthase expression in prognosis and outcome of adjuvant chemotherapy in patients with rectal cancer. J Clin Oncol 12:2640-2647
16. Buyse M, Thirion P, Carlson RW, Burzykowski T, Molenberghs G, Piedbois P (2000) Relation between tumour response to first-line chemotherapy and survival in advanced colorectal cancer: a meta-analysis. Lancet 356:373-378
17. De Gramont A, Figer A, Seymour M, Homerin M, Hmissi A, Cassidy J, Boni C, Cortes-Funes H, Cervantes A, Freyer G, Papamichael D, Le Bail N, Louvet C, Hendler D, de Brand F, Wilson C, Morvan F, Bonetti A (2000) Leucovorin and fluorouracil with or without Oxaliplatin as first-line treatment in advanced colorectal cancer. J Clin Oncol 18:2938-2947
18. Brueckl WM, Mösch C, Schaber S, Brabletz T, Jung A, Günther K, Riedel C, Wiest GH, Kirchner T, Hohenberger W, Hahn EG, Wein A (2001) Microsatellite instability as a predictive factor for response and survival in palliative patients with colorectal cancer receiving first-line chemotherapy. Gut (in press)
19. Bubendorf L, et al (1999) Hormone therapy failure in human prostate cancer: analysis by complementary DNA and tissue microarrays. J Natl Cancer Inst 91:1758-1764
20. Khan J, et al (1998) Gene expression profiling of alveolar rhabdomyosarcoma with cDNA microarrays. Cancer Res 58:5009-5013
21. Perou CM, et al (2000) Molecular portraits of human breast tumours. Nature 406:747-752
22. Alon U, Barkai N, Nottermann DA, Gish K, Ybarra S, Mack D, Levine AJ (1999) Broad patterns of gene expression revealed by clustering analysis of tumor and normal colon tissues probed by oligonucleotide arrays. Proc Natl Acad Sci USA 96:6745-6750
23. Alizadeh AA, et al (2000) Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling. Nature 403:503-511
24. Bittner M, et al (2000) Molecular classification of cutaneous malignant melanoma by gene expression profiling. Nature 406:536-540
25. Ross DT, et al (2000) Systematic variation in gene expression patterns in human cancer cell lines. Nat Genet 24:227-235