-
1
-
-
0034708480
-
The genome sequence of Drosophila melanogaster
-
Adams, M.D., Celniker, S.E., Holt, R.A., Evans, C.A., Gocayne, J.D., Amanatides, P.G., Scherer, S.E., Li, P.W., Hoskins, R.A., Galle, R.F., et al. 2000. The genome sequence of Drosophila melanogaster. Science 287: 2185-2195.
-
(2000)
Science
, vol.287
, pp. 2185-2195
-
-
Adams, M.D.1
Celniker, S.E.2
Holt, R.A.3
Evans, C.A.4
Gocayne, J.D.5
Amanatides, P.G.6
Scherer, S.E.7
Li, P.W.8
Hoskins, R.A.9
Galle, R.F.10
-
2
-
-
0026328675
-
Genomic mapping by anchoring random clones: A mathematical analysis
-
Arratia, R., Lander, E.S., Tavaré, S., and Waterman, M.S. 1991. Genomic mapping by anchoring random clones: A mathematical analysis. Genomics 11: 806-827.
-
(1991)
Genomics
, vol.11
, pp. 806-827
-
-
Arratia, R.1
Lander, E.S.2
Tavaré, S.3
Waterman, M.S.4
-
3
-
-
0026287618
-
Statistical analysis of DNA fingerprint data for ordered clone physical mapping of human chromosomes
-
Balding, D.J. and Torney, D.C. 1991. Statistical analysis of DNA fingerprint data for ordered clone physical mapping of human chromosomes. Bull. Math. Biol. 53: 853-879.
-
(1991)
Bull. Math. Biol.
, vol.53
, pp. 853-879
-
-
Balding, D.J.1
Torney, D.C.2
-
4
-
-
0035675041
-
An integrated map of Arabidopsis thaliana for functional analysis of its genome sequence
-
Chang, Y.L., Tao, Q., Scheuring, C., Ding, K., Meksem, K., and Zhang, H.-B. 2001. An integrated map of Arabidopsis thaliana for functional analysis of its genome sequence. Genetics 159: 1231-1242.
-
(2001)
Genetics
, vol.159
, pp. 1231-1242
-
-
Chang, Y.L.1
Tao, Q.2
Scheuring, C.3
Ding, K.4
Meksem, K.5
Zhang, H.-B.6
-
5
-
-
0035865257
-
Integration of cytogenetic landmarks into the draft sequence of the human genome
-
Cheung, V.G., Nowak, N., Jang, W., Kirsch, I.R., Zhao, S., Chen, X.N., Furey, T.S., Kim, U.J., Kuo, W.L., Olivier, M. et al. 2001. Integration of cytogenetic landmarks into the draft sequence of the human genome. Nature 409: 953-958.
-
(2001)
Nature
, vol.409
, pp. 953-958
-
-
Cheung, V.G.1
Nowak, N.2
Jang, W.3
Kirsch, I.R.4
Zhao, S.5
Chen, X.N.6
Furey, T.S.7
Kim, U.J.8
Kuo, W.L.9
Olivier, M.10
-
6
-
-
85038340693
-
Sequence determination from overlapping fragments: A simple model of whole-genome shotgun sequencing
-
art. no. 068106
-
Derrida, B. and Fink, T.M.A. 2002. Sequence determination from overlapping fragments: A simple model of whole-genome shotgun sequencing. Phys. Rev. Lett. 88: art. no. 068106.
-
(2002)
Phys. Rev. Lett.
, vol.88
-
-
Derrida, B.1
Fink, T.M.A.2
-
7
-
-
0031626786
-
Pseudomonas aeruginosa PAO1 bacterial artificial chromosomes: Strategies for mapping, screening, and sequencing 100 kb loci of the 5.9 Mb genome
-
Dewar, K., Sabbagh, L., Cardinal, G., Veilleux, F., Sanschagrin, F., Birren, B., and Levesque, R.C. 1998. Pseudomonas aeruginosa PAO1 bacterial artificial chromosomes: Strategies for mapping, screening, and sequencing 100 kb loci of the 5.9 Mb genome. Microb. Comp. Genomics 3: 105-117.
-
(1998)
Microb. Comp. Genomics
, vol.3
, pp. 105-117
-
-
Dewar, K.1
Sabbagh, L.2
Cardinal, G.3
Veilleux, F.4
Sanschagrin, F.5
Birren, B.6
Levesque, R.C.7
-
8
-
-
0031306196
-
Bacterial artificial chromosome (BAC) library as a tool for physical mapping of the archaeon Methanosarcina thermophila TM-1
-
Diaz-Perez, S.V., Alatriste-Mondragon, F., Hernandez, R., Birren, B., and Gunsalus, R.P. 1997. Bacterial artificial chromosome (BAC) library as a tool for physical mapping of the archaeon Methanosarcina thermophila TM-1. Microb. Comp. Genomics 2: 275-286.
-
(1997)
Microb. Comp. Genomics
, vol.2
, pp. 275-286
-
-
Diaz-Perez, S.V.1
Alatriste-Mondragon, F.2
Hernandez, R.3
Birren, B.4
Gunsalus, R.P.5
-
9
-
-
0026326294
-
Genome mapping with anchored clones: Theoretical aspects
-
Ewens, W.J., Bell, C.J., Donnelly, P.J., Dunn, P., Matallana, E., and Ecker, J.R. 1991. Genome mapping with anchored clones: Theoretical aspects. Genomics 11: 799-805.
-
(1991)
Genomics
, vol.11
, pp. 799-805
-
-
Ewens, W.J.1
Bell, C.J.2
Donnelly, P.J.3
Dunn, P.4
Matallana, E.5
Ecker, J.R.6
-
10
-
-
0012109498
-
The random division of an interval and the random covering of a circle
-
Flatto, L. and Konheim, A.G. 1962. The random division of an interval and the random covering of a circle. SIAM Rev. 4: 211-222.
-
(1962)
SIAM Rev.
, vol.4
, pp. 211-222
-
-
Flatto, L.1
Konheim, A.G.2
-
11
-
-
0029653518
-
Whole-genome random sequencing and assembly of H. influenzae rd
-
Fleischmann, R.D., Adams, M.D., White, O., Clayton, R.A., Kirkness, E.F., Kerlavage, A.R., Bult, C.J., Tomb, J.F., Dougherty, B.A., Merrick, J.M., et al. 1995. Whole-genome random sequencing and assembly of H. influenzae rd. Science 269: 496-512.
-
(1995)
Science
, vol.269
, pp. 496-512
-
-
Fleischmann, R.D.1
Adams, M.D.2
White, O.3
Clayton, R.A.4
Kirkness, E.F.5
Kerlavage, A.R.6
Bult, C.J.7
Tomb, J.F.8
Dougherty, B.A.9
Merrick, J.M.10
-
12
-
-
0003508389
-
Introduction to the theory of coverage processes
-
John Wiley & Sons, New York, NY
-
Hall, P. 1988. Introduction to the theory of coverage processes. John Wiley & Sons, New York, NY.
-
(1988)
-
-
Hall, P.1
-
13
-
-
17144462135
-
DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae
-
Heidelberg, J.F., Eisen, J.A., Nelson, W.C., Clayton, R.A., Gwinn, M.L., Dodson, R.J., Haft, D.H., Hickey, E.K., Peterson, J.D., Umayam, L. et al., 2000. DNA sequence of both chromosomes of the cholera pathogen Vibrio cholerae. Nature 406: 477-483.
-
(2000)
Nature
, vol.406
, pp. 477-483
-
-
Heidelberg, J.F.1
Eisen, J.A.2
Nelson, W.C.3
Clayton, R.A.4
Gwinn, M.L.5
Dodson, R.J.6
Haft, D.H.7
Hickey, E.K.8
Peterson, J.D.9
Umayam, L.10
-
14
-
-
2042437650
-
Initial sequencing and analysis of the human genome
-
International Human Genome Sequencing Consortium
-
International Human Genome Sequencing Consortium 2001. Initial sequencing and analysis of the human genome. Nature 409: 860-921.
-
(2001)
Nature
, vol.409
, pp. 860-921
-
-
-
15
-
-
8544265296
-
The nucleotide sequence of Saccharomyces cerevisiae chromosome XII
-
Johnston, M., Hillier, L., Riles, L., Albermann, K., Andre, B., Ansorge, W., Benes, V., Bruckner, M., Delius, H., Dubois, E. et al., 1997. The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. Nature 387: 87-90.
-
(1997)
Nature
, vol.387
, pp. 87-90
-
-
Johnston, M.1
Hillier, L.2
Riles, L.3
Albermann, K.4
Andre, B.5
Ansorge, W.6
Benes, V.7
Bruckner, M.8
Delius, H.9
Dubois, E.10
-
16
-
-
0003858660
-
Geometrical probability
-
Hafner Publishing Company, New York, NY
-
Kendall, M.G. and Moran, P.A.P. 1963. Geometrical probability. Hafner Publishing Company, New York, NY.
-
(1963)
-
-
Kendall, M.G.1
Moran, P.A.P.2
-
17
-
-
0029003260
-
Physical mapping of complex genomes by sampled sequencing: A theoretical analysis
-
Kupfer, K., Smith, M.W., Quackenbush, J., and Evans, G.A. 1995. Physical mapping of complex genomes by sampled sequencing: A theoretical analysis. Genomics 27: 90-100.
-
(1995)
Genomics
, vol.27
, pp. 90-100
-
-
Kupfer, K.1
Smith, M.W.2
Quackenbush, J.3
Evans, G.A.4
-
18
-
-
0023988195
-
Genomic mapping by fingerprinting random clones: A mathematical analysis
-
Lander, E.S. and Waterman, M.S. 1988. Genomic mapping by fingerprinting random clones: A mathematical analysis. Genomics 2: 231-239.
-
(1988)
Genomics
, vol.2
, pp. 231-239
-
-
Lander, E.S.1
Waterman, M.S.2
-
19
-
-
0026619718
-
Genomic mapping by single copy landmark detection: A predictive model with a discrete mathematical approach
-
Marr, T.G., Yan, X., and Yu, Q. 1992. Genomic mapping by single copy landmark detection: A predictive model with a discrete mathematical approach. Mamm. Genome 3: 644-649.
-
(1992)
Mamm. Genome
, vol.3
, pp. 644-649
-
-
Marr, T.G.1
Yan, X.2
Yu, Q.3
-
20
-
-
0036085549
-
MagnaportheDB: A federated solution for integrating physical and genetic map data with BAC end derived sequences for the rice blast fungus Magnaporthe grisea
-
Martin, S.L., Blackmon, B.P., Rajagopalan, R., Houfek, T.D., Sceeles, R.G., Denn, S.O., Mitchell, T.K., Brown, D.E., Wing, R.A., and Dean, R.A. 2002. MagnaportheDB: A federated solution for integrating physical and genetic map data with BAC end derived sequences for the rice blast fungus Magnaporthe grisea. Nucleic Acids Res. 30: 121-124.
-
(2002)
Nucleic Acids Res.
, vol.30
, pp. 121-124
-
-
Martin, S.L.1
Blackmon, B.P.2
Rajagopalan, R.3
Houfek, T.D.4
Sceeles, R.G.5
Denn, S.O.6
Mitchell, T.K.7
Brown, D.E.8
Wing, R.A.9
Dean, R.A.10
-
21
-
-
0035865087
-
A physical map of the human genome
-
McPherson, J.D., Marra, M., Hillier, L., Waterston, R.H., Chinwalla, A., Wallis, J., Sekhon, M., Wylie, K., Mardis, E.R., Wilson, R.K., et al. 2001. A physical map of the human genome. Nature 409: 934-941.
-
(2001)
Nature
, vol.409
, pp. 934-941
-
-
McPherson, J.D.1
Marra, M.2
Hillier, L.3
Waterston, R.H.4
Chinwalla, A.5
Wallis, J.6
Sekhon, M.7
Wylie, K.8
Mardis, E.R.9
Wilson, R.K.10
-
22
-
-
0032990408
-
A complete BAC-based physical map of the Arabidopsis thaliana genome
-
Mozo, T., Dewar, K., Dunn, P., Ecker, J.R., Fischer, S., Kloska, S., Lehrach, H., Marra, M., Martienssen, R., Meier-Ewert, S., et al. 1999. A complete BAC-based physical map of the Arabidopsis thaliana genome. Nat. Genet. 22: 271-275
-
(1999)
Nat. Genet.
, vol.22
, pp. 271-275
-
-
Mozo, T.1
Dewar, K.2
Dunn, P.3
Ecker, J.R.4
Fischer, S.5
Kloska, S.6
Lehrach, H.7
Marra, M.8
Martienssen, R.9
Meier-Ewert, S.10
-
23
-
-
0346388742
-
Whole-genome DNA sequencing
-
Myers, G. 1999. Whole-genome DNA sequencing. Comput. Sci. Eng. 1: 33-43.
-
(1999)
Comput. Sci. Eng.
, vol.1
, pp. 33-43
-
-
Myers, G.1
-
24
-
-
0032529138
-
An improved approach for construction of bacterial artificial chromosome libraries
-
Osoegawa, K., Woon, P.Y., Zhao, B., Frengen, E., Tateno, M., Catanese, J.J., and de Jong, P.J. 1998. An improved approach for construction of bacterial artificial chromosome libraries. Genomics 52: 1-8.
-
(1998)
Genomics
, vol.52
, pp. 1-8
-
-
Osoegawa, K.1
Woon, P.Y.2
Zhao, B.3
Frengen, E.4
Tateno, M.5
Catanese, J.J.6
de Jong, P.J.7
-
25
-
-
0033968788
-
Bacterial artificial chromosome libraries for mouse sequencing and functional analysis
-
Osoegawa, K., Tateno, M., Woon, P.Y., Frengen, E., Mammoser, A.G., Catanese, J.J., Hayashizaki, Y., and de Jong, P.J. 2000. Bacterial artificial chromosome libraries for mouse sequencing and functional analysis. Genome Res. 10: 116-128.
-
(2000)
Genome Res.
, vol.10
, pp. 116-128
-
-
Osoegawa, K.1
Tateno, M.2
Woon, P.Y.3
Frengen, E.4
Mammoser, A.G.5
Catanese, J.J.6
Hayashizaki, Y.7
de Jong, P.J.8
-
26
-
-
0035080952
-
A bacterial artificial chromosome library for sequencing the complete human genome
-
Osoegawa, K., Mammoser, A.G., Wu, C., Frengen, E., Zeng, C., Catanese, J.J., and de Jong, P.J. 2001. A bacterial artificial chromosome library for sequencing the complete human genome. Genome Res. 11: 483-496.
-
(2001)
Genome Res.
, vol.11
, pp. 483-496
-
-
Osoegawa, K.1
Mammoser, A.G.2
Wu, C.3
Frengen, E.4
Zeng, C.5
Catanese, J.J.6
de Jong, P.J.7
-
27
-
-
0028914393
-
Genomic mapping by end-characterized random clones: A mathematical analysis
-
Port, E., Sun, F., Martin, D., and Waterman, M.S. 1995. Genomic mapping by end-characterized random clones: A mathematical analysis. Genomics 26: 84-100.
-
(1995)
Genomics
, vol.26
, pp. 84-100
-
-
Port, E.1
Sun, F.2
Martin, D.3
Waterman, M.S.4
-
28
-
-
0029610763
-
Random subcloning
-
Roach, J.C. 1995. Random subcloning. Genome Res. 5: 464-473.
-
(1995)
Genome Res.
, vol.5
, pp. 464-473
-
-
Roach, J.C.1
-
29
-
-
0028987725
-
Pairwise end sequencing: A unified approach to genomic mapping and sequencing
-
Roach, J.C., Boysen, C., Wang, K., and Hood, L. 1995. Pairwise end sequencing: A unified approach to genomic mapping and sequencing. Genomics 26: 345-353.
-
(1995)
Genomics
, vol.26
, pp. 345-353
-
-
Roach, J.C.1
Boysen, C.2
Wang, K.3
Hood, L.4
-
30
-
-
0033613388
-
Gaps in the human genome project
-
Roach, J.C., Siegel, A.F., van den Engh, G., Trask, B., and Hood, L. 1999. Gaps in the human genome project. Nature 401: 843-845.
-
(1999)
Nature
, vol.401
, pp. 843-845
-
-
Roach, J.C.1
Siegel, A.F.2
van den Engh, G.3
Trask, B.4
Hood, L.5
-
32
-
-
0020457909
-
Theoretical study of the fraction of a long-chain DNA that can be incorporated in a recombinant DNA partial-digest library
-
Seed, B. 1982. Theoretical study of the fraction of a long-chain DNA that can be incorporated in a recombinant DNA partial-digest library. Biopolymers 21: 1793-1810.
-
(1982)
Biopolymers
, vol.21
, pp. 1793-1810
-
-
Seed, B.1
-
33
-
-
0026703169
-
Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector
-
Shizuya, H., Birren, B., Kim, U.J., Mancino, V., Slepak, T., Tachiiri, Y., and Simon, M. 1992. Cloning and stable maintenance of 300-kilobase-pair fragments of human DNA in Escherichia coli using an F-factor-based vector. Proc. Natl. Acad. Sci. 89: 8794-8797.
-
(1992)
Proc. Natl. Acad. Sci.
, vol.89
, pp. 8794-8797
-
-
Shizuya, H.1
Birren, B.2
Kim, U.J.3
Mancino, V.4
Slepak, T.5
Tachiiri, Y.6
Simon, M.7
-
34
-
-
0012182841
-
Asymptotic coverage distributions on the circle
-
Siegel, A.F. 1979. Asymptotic coverage distributions on the circle. Ann. Probability 7: 651-661.
-
(1979)
Ann. Probability
, vol.7
, pp. 651-661
-
-
Siegel, A.F.1
-
35
-
-
0030986553
-
Multiplex sequencing of 1.5 Mb of the Mycobacterium leprae genome
-
Smith, D.R., Richterich, P., Rubenfield, M., Rice, P.W., Butler, C., Lee, H.M., Kirst, S., Gundersen, K., Abendschan, K., Xu, Q.X., et al. 1997. Multiplex sequencing of 1.5 Mb of the Mycobacterium leprae genome. Genome Res. 7: 802-819.
-
(1997)
Genome Res.
, vol.7
, pp. 802-819
-
-
Smith, D.R.1
Richterich, P.2
Rubenfield, M.3
Rice, P.W.4
Butler, C.5
Lee, H.M.6
Kirst, S.7
Gundersen, K.8
Abendschan, K.9
Xu, Q.X.10
-
36
-
-
0004231341
-
Geometric probability
-
Society for Industrial and Applied Mathematics, Philadelphia, PA
-
Solomon, H. 1978. Geometric probability. Society for Industrial and Applied Mathematics, Philadelphia, PA.
-
(1978)
-
-
Solomon, H.1
-
37
-
-
0012183442
-
Solution to a geometrical problem in probability
-
Stevens, W.L. 1939. Solution to a geometrical problem in probability. Ann. Eugen. 9: 315-320.
-
(1939)
Ann. Eugen.
, vol.9
, pp. 315-320
-
-
Stevens, W.L.1
-
38
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
The Arabidopsis Genome Initiative
-
The Arabidopsis Genome Initiative 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408: 796-815.
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
39
-
-
0032509302
-
Genome sequence of the nematode C. elegans: A platform for investigating biology
-
elegans Sequencing Consortium
-
The C. elegans Sequencing Consortium 1998. Genome sequence of the nematode C. elegans: A platform for investigating biology. Science 282: 2012-2018.
-
(1998)
Science
, vol.282
, pp. 2012-2018
-
-
The, C.1
-
40
-
-
0034892174
-
A marker-dense physical map of the Bradyrhizobium japonicum genome
-
Tomkins, J.P., Wood, T.C., Stacey, M.G., Loh, J.T., Judd, A., Goicoechea, J.L., Stacey, G., Sadowsky, M.J., and Wing, R.A. 2001. A marker-dense physical map of the Bradyrhizobium japonicum genome. Genome Res. 11: 1434-1440.
-
(2001)
Genome Res.
, vol.11
, pp. 1434-1440
-
-
Tomkins, J.P.1
Wood, T.C.2
Stacey, M.G.3
Loh, J.T.4
Judd, A.5
Goicoechea, J.L.6
Stacey, G.7
Sadowsky, M.J.8
Wing, R.A.9
-
41
-
-
0026033351
-
Mapping using unique sequences
-
Torney, D.C. 1991. Mapping using unique sequences. J. Mol. Biol. 217: 259-264.
-
(1991)
J. Mol. Biol.
, vol.217
, pp. 259-264
-
-
Torney, D.C.1
-
42
-
-
0035895505
-
The sequence of the human genome
-
Venter, J.C., Adams, M.D., Myers, E.W., Li, P.W., Mural, R.J., Sutton, G.G., Smith, H.O., Yandell, M., Evans, C.A., Holt, R.A., et al. 2001. The sequence of the human genome. Science 291: 1304-1351.
-
(2001)
Science
, vol.291
, pp. 1304-1351
-
-
Venter, J.C.1
Adams, M.D.2
Myers, E.W.3
Li, P.W.4
Mural, R.J.5
Sutton, G.G.6
Smith, H.O.7
Yandell, M.8
Evans, C.A.9
Holt, R.A.10
-
43
-
-
0004207406
-
-
3rd edition. O'Reilly & Associates, Inc., Sebastopol, CA
-
Wall, L., Christiansen, T., and Orwant, J. 2000. Programming Perl. 3rd edition. O'Reilly & Associates, Inc., Sebastopol, CA.
-
(2000)
Programming Perl
-
-
Wall, L.1
Christiansen, T.2
Orwant, J.3
-
44
-
-
0035107285
-
Theories and applications for sequencing randomly selected clones
-
Wendl, M.C., Marra, M.A., Hillier, L.W., Chinwalla, A.T., Wilson, R.K., and Waterston, R.H., 2001. Theories and applications for sequencing randomly selected clones. Genome Res. 11: 274-280.
-
(2001)
Genome Res.
, vol.11
, pp. 274-280
-
-
Wendl, M.C.1
Marra, M.A.2
Hillier, L.W.3
Chinwalla, A.T.4
Wilson, R.K.5
Waterston, R.H.6
-
45
-
-
0034638637
-
Genomic organization, chromosomal localization, and the complete 22 kb DNA sequence of the human GCMa/GCM1,a placenta-specific transcription factor gene
-
Yamada, K., Ogawa, H., Tamiya, G., Ikeno, M., Morita, M., Asakawa, S., Shimizu, N., and Okazaki, T. 2000. Genomic organization, chromosomal localization, and the complete 22 kb DNA sequence of the human GCMa/GCM1,a placenta-specific transcription factor gene. Biochem. Biophys. Res. Commun. 278: 134-139.
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.278
, pp. 134-139
-
-
Yamada, K.1
Ogawa, H.2
Tamiya, G.3
Ikeno, M.4
Morita, M.5
Asakawa, S.6
Shimizu, N.7
Okazaki, T.8
-
46
-
-
0032883192
-
Physical map and organization of chromosome 7 in the rice blast fungus Magnaporthe grisea
-
Zhu, H., Blackmon, B.P., Sasinowski, M., and Dean, R.A. 1999. Physical map and organization of chromosome 7 in the rice blast fungus Magnaporthe grisea. Genome Res. 9: 739-750.
-
(1999)
Genome Res.
, vol.9
, pp. 739-750
-
-
Zhu, H.1
Blackmon, B.P.2
Sasinowski, M.3
Dean, R.A.4
|