Multilocus population structure of Tapesia yallundae in Washington State

Molecular Ecology

Volumn 11, Issue 11, 2002, Pages 2229-2239

  Douhan, G W ^a,b   Peever, T L ^a   Murray, T D ^a  

^a WASHINGTON STATE UNIVERSITY   (United States)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

AFLP; Fungi; Gametic disequilibrium; Population genetics; Recombination; Tapesia

Indexed keywords

FUNGI; MOLLISIA; MYXOGASTRIA; OCULIMACULA YALLUNDAE; TRITICUM AESTIVUM;

ARTICLE; ASCOMYCETES; ASEXUAL REPRODUCTION; GENETIC LINKAGE; GENETIC MARKER; GENETIC VARIABILITY; GENETICS; MICROBIOLOGY; POPULATION GENETICS; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; UNITED STATES; WHEAT;

ASCOMYCOTA; GENETIC MARKERS; GENETICS, POPULATION; LINKAGE (GENETICS); POLYMORPHISM, RESTRICTION FRAGMENT LENGTH; REPRODUCTION, ASEXUAL; TRITICUM; VARIATION (GENETICS); WASHINGTON;

EID: 0036846309     PISSN: 09621083     EISSN: None     Source Type: Journal    
DOI: 10.1046/j.1365-294X.2002.01607.x     Document Type: Article

References (42)

1. Agapow PM, Burt A (2001) Indices of multilocus linkage disequilibrium. Molecular Ecology Notes, 1, 101-102.
2. Bassam BJ, Caetano-Anolles G, Gresshoff PM (1991) Fast and sensitive silver staining of DNA in polyacrylamide gels. Annals of Biochemistry, 196, 80-83.
3. Boeger JM, Chen RS, McDonald BA (1993) Gene flow between geographic populations of Mycosphaerella graminicola (Anamorph Septoria tritici) detected with restricted fragment length polymorphism markers. Phytopathology, 83, 1148-1154.
4. Brown JKM (1996) The choice of molecular marker methods for population genetic studies on plant pathogens. New Phytologist, 133, 183-195.
5. Brown AHD, Feldman MW, Nevo E (1980) Multilocus structure of natural populations of Hordeum spontaneum. Genetics, 96, 523-536.
6. Bruehl GW, Nelson WL, Koehler F, Vogel OA (1968) Experiments with Cercosporella foot rot (strawbreaker) disease of winter wheat. Washington Experimental Station Bulletin, 694, 14pp.
7. Burdon JJ, Silk J (1977) Sources and patterns of diversity in plant-pathogenic fungi. Phytopathology, 87, 664-669.
8. Burt A, Carter DA, Koenig GL, White TJ, Taylor JW (1996) Molecular markers reveal cryptic sex in the human pathogen Coccidiodes immitis. Proceedings of the National Academy of Sciences of the USA, 93, 770-773.
9. Chen RS, McDonald BA (1996) Sexual reproduction plays a major role in the genetic structure of populations of the fungus Mycosphaerella graminicola. Genetics, 142, 1119-1126.
10. Douhan GW, Murray TD, Dyer PS (2002) Species and mating-type distribution of Tapesia yallundae and T. acuformis and occurrence of apothecia in the U.S. Pacific Northwest. Phytopathology, 92, 703-709.
11. Dyer PS, Bateman GL, Lucas JA, Peberdy JF (1994) Seasonal development of apothecia of the cereal pathogen Tapesia yallundae on straw stubble in the UK. Annals of Applied Biology, 125, 489-500.
12. Dyer PS, Furneaux PA, Douhan GW, Murray TD (2001) A multiplex PCR test for determination of mating-type applied to the plant pathogens Tapesia yallundae and Tapesia acuformis. Fungal Genetics and Biology, 33, 173-180.
13. Dyer PS, Rezanoor HN, Lucas JA, Peberdy JF (1993) Two-allele heterothallism in Tapesia yallundae, the teleomorph of the cereal eyespot pathogen Pseudocercosporella herpotrichoides. Physiological and Molecular Plant Pathololgy, 43, 403-414.
14. Geiser DM, Pih JI, Taylor JW (1998) Cryptic speciation and decombination in the aflatoxin - Producing fungus. Aspergillus Flavus.
15. Goodwin SB, Saghai Maroof MA, Allard RW, Webster RK (1993) Isozyme variation within and among populations of Rhynchosporium secalis in Europe, Australia, and the United States. Mycological Research, 97, 49-58.
16. Harvey PR, Butterworth PJ, Hawke BG, Pankurst CE (2000) Genetic variation among populations of Pythium irregulare in southern Australia. Plant Pathology, 49, 619-627.
17. Hoffman RJ (1986) Variation in contribution of asexual reproduction to the genetic structure of populations of the sea anemone Metridium senile. Evolution, 40, 357-365.
18. Keller SM, Wolfe MS, McDermott JM, McDonald BA (1997) High genetic similarity among populations of Phaeosphaeria nodorum across wheat cultivars and regions in Switzerland. Phytopathology, 87, 1134-1139.
19. Kohn LM (1995) The clonal dynamic in wild and agricultural plant populations. Canadian Journal of Botany, 73 (Suppl. 1), S1231-S1240.
20. Kumar J, Nelsen RJ, Zeigler RS (1999) Population structure and dynamics of Magnaporthe grisea in the Indian Himalayas. Genetics, 152, 971-984.
21. Lee SB, Taylor JW (1990) Isolation of DNA from fungal mycelia and single spores. In: PCR Protocols: A Guide to Methods and Applications (eds Innis MA, Gelfand DH, Sninsky JJ, White TJ), pp. 282-287. Academic Press, San Diego.
22. Lucas JA, Dyer PS, Murray TD (2000) Pathogenicity, host-specificity, and population biology of Tapesia spp., causal agents of eyespot disease of cereals. Advances in Botanical Research, 33, 225-258.
23. Maynard Smith J, Smith NH, O'Rourke M, Spratt BG (1993) How clonal are bacteria? Proceedings of the National Academy of Sciences of the USA, 90, 4384-4388.
24. McDermott JM, McDonald BA (1993) Gene flow in plant pathosystems. Annual Review of Phytopathology, 31, 353-373.
25. McDonald BA (1997) The population genetics of fungi: Tools and techniques. Phytopathology, 87, 448-453.
26. Milgroom MG (1996) Recombination and the multilocus structure of fungal populations. Annual Review of Phytopathology, 34, 457-477.
27. Milgroom MG, Frey WE (1997) Contributions of population genetics to plant disease epidemiology and management. In: Advances in Botanical Research, Vol. 24. Incorporating Advances in Plant Pathology (eds), pp. 1-30. Academic Press, San Diego.
28. Murray TD (1996) Resistance to benzimidazole fungicides in the cereal eyespot pathogen. Pseudocercosporella herpotrichoides in the Pacific Northwest 1984 to 1990. Plant Disease, 80, 19-23.
29. Nei M (1973) Analysis of gene diversity in subdivided populations. Proceedings of the National Academy of Sciences of the USA, 70, 3321-3323.
30. Nei M, Maruyama T, Chakraborty R (1975) Bottleneck effect and genetic variability in populations. Evolution, 29, 1-10.
31. Peever TL, Milgroom MG (1994) Genetic structure of Pyrenophora teres populations determined with random amplified polymorphic DNA markers. Canadian Journal of Botany, 72, 915-923.
32. Slatkin M (1985) Gene flow in natural populations. Annual Review of Ecology and Systematics, 16, 393-430.
33. Slatkin M (1987) Gene flow and geographic structure of natural populations. Science, 236, 787-792.
34. Slatkin M (1994) Linkage disequilibrium in growing and stable populations. Genetics, 137, 331-336.
35. Sprague R, Fellows H (1934) Cercosporella foot rot of winter cereals. USDA Technical Bulletin, 428, 24pp.
36. Stoddart JA, Taylor JF (1988) Genotypic diversity: Estimation and prediction in samples. Genetics, 118, 705-711.
37. Swofford DL (1998) PAUP*: Phylogenetic Analysis Using Parsimony (*and Other Methods), Version 4.0. Sinauer Associates, Sunderland, MA.
38. Taylor JW, Jacobson DJ, Fisher MC (1999) The evolution of asexual fungi: Reproduction, speciation and classification. Annual Review of Phytopathology, 37, 197-246.
39. Vos P, Hogers R, Bleeker M et al. (1995) AFLP: A new technique for DNA fingerprinting. Nucleic Acids Research, 23, 4407-4444.
40. Wallwork H, Spooner B (1988) Tapesia yallundae - The teleomorph of Pseudocercosporella herpotrichoides. Transactions of the British Mycological Society, 91, 703-705.
41. Weir BS (1990) Genetic Data Analysis. Sinauer Associates, Sunderland, MA.
42. Weir BS, Cockerham CC (1984) Estimating F-statistics for the analysis of population structure. Evolution, 38, 1358-137